RESUMO
Introducción: El pargo mancha es un pez marino de alto consumo e interés comercial en Costa Rica que está sometido a una fuerte presión pesquera, la cual puede afectar la diversidad genética y generar problemas por depresión endogámica. Objetivo: Evaluar el estado genético de la población de Lutjanus guttatus mediante el uso microsatélites. Métodos: Se recolectaron muestras entre el 2018 y 2019 y se estudiaron 44 individuos de cada una de las localidades del Golfo de Nicoya y Golfo Dulce. Se realizó la extracción de ADN y la amplificación de diez loci con microsatélites mediante PCR, para la determinación del genotipo, análisis de diversidad genética y estructura poblacional. Resultados: Los parámetros de diversidad indican un elevado polimorfismo asociado con un alto número de alelos obtenidos por locus, pero con bajos niveles de heterocigosidad observada en comparación con la esperada (Ho= 0.774 y 0.800 y He= 0.948 y 0.954 para Golfo de Nicoya y Golfo Dulce, respectivamente). No hay evidencia suficiente para decir que las dos poblaciones son distintas (FST= 0.00264, P > 0.05). La desviación del Equilibrio de Hardy-Weinberg indica la posible mezcla de organismos de origen distinto a los del medio silvestre. Conclusiones: L. guttatus tiene niveles altos de diversidad genética, no hay evidencia de diferenciación en subpoblaciones genéticas, lo que en manejo pesquerías se considera una sola población panmíctica. La posible mezcla de individuos de origen distinto al silvestre sugiere la presencia de organismos de un programa de repoblación o de cultivos comerciales en la región. El uso de marcadores genéticos se recomienda para el monitoreo, además, en programas de repoblación y evaluar su efecto.
Introduction: The spotted snapper is a high-consumption and commercially important marine fish in Costa Rica, subjected to heavy fishing pressures, which can affect genetic diversity and generate problems due to inbreeding depression. Objective: To evaluate the genetic status of the population of Lutjanus guttatus using microsatellites. Methods: Samples were collected between 2018 and 2019, and 44 individuals from each of the localities of the Gulf of Nicoya and the Gulf of Dulce were studied. DNA extraction and amplification of ten loci with microsatellites using PCR were performed, followed by genotyping, analysis of genetic diversity, and population structure. Results: Diversity parameters indicate a high polymorphism associated with a high number of alleles obtained per locus, but with low levels of observed heterozygosity compared to expected (Ho= 0.774 and 0.800, and He= 0.948 and 0.954 for the Gulf of Nicoya and Gulf of Dulce, respectively). There is not enough evidence to say that the two populations are distinct (FST= 0.00264, P > 0.05). Deviation from Hardy-Weinberg equilibrium was recorded, indicating possible mixing of organisms of different origin from the wild environment. Conclusions: L. guttatus presents high levels of genetic diversity, without evidence of differentiation in genetic subpopulations. For fisheries management purposes, they would be considered a single panmictic population. The possible mixing with wild individuals suggests the presence of organisms derived from a restocking or commercial cultivation program carried out in the region. The use of genetic markers is recommended to maintain monitoring, follow up on restocking programs and evaluate their effect.
Assuntos
Animais , Animais Endogâmicos/crescimento & desenvolvimento , Peixes/crescimento & desenvolvimento , Costa Rica , Aptidão GenéticaRESUMO
This study analyzed the Sardo Negro breed pedigree (41,521 animals registered from 1958 to 2019) to determine its structure, evolution, and genetic variability (GV). The population genetic parameters evaluated were effective number of founders (fe) and ancestors (fa), pedigree integrity, additive genetic relationship (AGR); number of complete generations (NCG), maximum generations traced (NMGT), and equivalent complete generations (NECG); effective population size (Ne), inbreeding coefficient (F), and generation interval (GI). The average GI was 7.45 years. A total of 7,804 founders and 4,856 ancestors were identified for a fe of 185 and a fa of 97. The average and maximum values of NCG, NECG, and NMGT were 1.6 and 5.0, 2.5 and 6.5, 4.3 and 12, with Ne estimates of 15.9, 25.9, and 69.0, respectively. The increase in F, linked to Ne, ranged from 0.72% to 3.1% per generation. The average values for F and AGR were 3.6% and 1.0%, respectively. The proportion of inbred individuals was 32.0%, with F values ranging from 0.01 to 62.2% and an average of 11.3%. The rate of inbred population was 1.3% per year. The annual rate of AGR was 0.04%. For the continuity and projection of the breed, the evolution of F as a function of Ne and the possible implications of the selection schemes must be considered. The genetic variability sustained over time results from the Ne.
Os objetivos deste estudo foram analisar o pedigree (41.521 registros de 1958 a 2019) da raça Sardo Negro para avaliar a estrutura, evolução e variabilidade genética (VG) da população. Os parâmetros genéticos populacionais utilizados foram: número efetivo de fundadores (fe) e ancestrais (fa); integridade do pedigree; relação genética aditiva (RGA); número de gerações completas (NGC), máximo plotado (NGT) e equivalentes (NGE); tamanho efetivo (Ne); consanguinidade (F); intervalo geracional (IG). O IG médio foi de 7,45 anos. Foram identificados 7.804 fundadores e 4.856 ancestrais, para fe 185 e 97 na fa. As médias e máximas para NGC, NGE e NGT foram 1,6 e 5,0, 2,5 e 6,5, 4,3 e 12, com estimativas de Ne 15,9, 25,9 e 69,0, respectivamente. O aumento de F, vinculado ao Ne, ficou na faixa de 0,72% a 3,1% por geração. A média para F 3,6% e 1,0% em RGA; a proporção de consanguíneos foi de 32,0%, com F na faixa de 0,01 a 62,2% e média de 11,3%. A taxa da população consanguínea foi de 1,3% ao ano. No RGA, a taxa ao ano era de 0,04%. Para a continuidade e projeção da raça, deve-se considerar a evolução de F em função de Ne e as possíveis implicações dos esquemas de seleção. A variabilidade genética sustentada ao longo do tempo resulta do Ne.
Assuntos
Animais , Bovinos , Linhagem , Bovinos/genética , Animais Endogâmicos , Variação Biológica da PopulaçãoRESUMO
The effect of inbreeding depression on sperm motility is well documented, but its influence on sperm morphometry has been scarcely examined to date. Here, we combined the use of computer-assisted sperm morphometry analysis (CASMA) with a SNP-based genomic approach to determine and characterize the effect of inbreeding on the sperm shape of a highly inbred cattle population. We determined seven morphometric parameters on frozen-thawed sperm samples of 57 Retinta bulls: length (L, µm), width (W, µm), area (A, µm2 ), perimeter (P, µm), ellipticity (ELI; L/W), elongation (L-W)/(L + W) and perimeter-to-area shape factor (p2a; P2 /4 × π × A). The comparison of highly inbred (HI) and lowly inbreed (LI) individuals based on runs of homozygosity (ROH) inbreeding values (F ROH ) showed no differences between groups. An additional two-step unsupervised sperm subpopulation analysis based on morphometric parameters showed significant differences in the abundance of different sperm subpopulations between groups (p < 0.05). This analysis revealed that HI bulls harbored a higher percentage of narrow-head sperm as opposed to the higher percentage of large- and round-headed sperm detected in LI. A further genomic characterization revealed 23 regions differentially affected by inbreeding in both groups, detecting six genes (SPAG6, ARMC3, PARK7, VAMP3, DYNLRB2, and PHF7) previously related to different spermatogenesis-associated processes.
Assuntos
Bovinos/genética , Depressão por Endogamia/genética , Endogamia , Espermatozoides/ultraestrutura , Animais , Animais Endogâmicos , Variação Biológica Individual , Forma Celular , DNA/genética , Estudos de Associação Genética , Genótipo , Haplótipos/genética , Masculino , Cabeça do Espermatozoide/ultraestruturaRESUMO
The objective of the present study was to assess the association between the inbreeding coefficient (F) of German Spitz dogs (litter, sires, and dams) and number of live newborn dogs for this breed. Records of dams and sires of a breeding system were used to calculate the F of 105 litters and their sires and dams and the number of live newborn dogs. The analysis performed through the GLM procedure showed a negative influence of F of litter and mother on litter size. This influence was investigated through models that considered linear and quadratic influences. Although the model that considered quadratic effect of F of the litter achieved the best adjustment, only linear coefficients were significant in both analyses. According to these results, the studied sample of German Spitz dogs exhibits inbreeding depression for litter size, which is an important information for breeders and professionals that assist in dog breeding. In addition to all the known effects of inbreeding on canine health, the results indicate that monitoring inbreeding through F is important for the reproductive success of the breed.
Assuntos
Animais , Cães , Animais Endogâmicos/genética , Fatores Raciais , Endogamia , Tamanho da Ninhada de Vivíparos/genéticaRESUMO
The aim of this study was to evaluate the reproductive traits of the non-inbred and inbred AquaAmérica, GIFT and AquaAmérica × GIFTgenetic groups. Six fish from each genetic group were used (2 females:1 male). Females were examined for the presence of eggs in their mouth at every four days, for 12 weeks. Reproduction occurred in all genetic groups (GIFT: 100%; non-inbred AquaAmérica and AquaAmérica ×GIFT: 75%; inbred AquaAmérica: 50%). Female weight, female standard length, total spawning weight, absolute fecundity, relative fecundity, spawn index and hatching rate did not differ significantly between the genetic groups. However, the non-inbred AquaAmérica variety showed lower values (P<0.05) for egg diameter (2.4mm) and egg weight (4.2mg) and higher values (P<0.05) for relative number of eggs (247.6 eggs/g of egg) than GIFT (egg diameter: 2.8mm; egg weight: 5.7mg; relative number of eggs: 175.4 eggs/g of egg) and AquaAmérica ×GIFT (egg diameter: 2.8mm; egg weight: 5.9mg; relative number of eggs: 168.8 eggs/g of egg). In conclusion, the non-inbred AquaAmérica variety produces smaller, lighter eggs but a higher relative number of eggs than the GIFT variety and the AquaAmérica ×GIFT cross; and inbreeding negatively affects spawning rate.(AU)
O objetivo deste estudo foi avaliar as características reprodutivas dos grupos genéticos AquaAmérica não endogâmicos e endogâmicos, GIFT e AquaAmérica × GIFT. Foram utilizados seis peixes de cada grupo genético (duas fêmeas:um macho). As fêmeas foram examinadas quanto à presença de ovos na boca a cada quatro dias, durante 12 semanas. A reprodução ocorreu em todos os grupos genéticos (GIFT: 100%; AquaAmérica não endogâmica e AquaAmérica × GIFT: 75%; AquaAmérica endogâmica: 50%). Peso e comprimento padrão de fêmea, peso total de desova, fecundidade absoluta, fecundidade relativa, índice de desova e taxa de eclosão não diferiram significativamente entre os grupos genéticos. Entretanto, a variedade não endogâmica da AquaAmérica apresentou valores mais baixos (P<0,05) para diâmetro do ovo (2,4mm) e peso do ovo (4,2mg) e maiores valores (P<0,05) para número relativo de ovos (247,6 ovos/g de ovo ) que GIFT (diâmetro do ovo: 2,8mm; peso do ovo: 5,7mg; número relativo de ovos: 175,4 ovos/g de ovo) e AquaAmérica × GIFT (diâmetro do ovo: 2,8mm; peso do ovo: 5,9mg; número relativo de ovos: 168,8 ovos/g de ovo). Em conclusão, a variedade AquaAmérica não endogâmica produz ovos menores e mais leves, mas um número relativo maior de ovos que a variedade GIFT e o cruzamento AquaAmérica × GIFT; a consanguinidade afeta negativamente a taxa de desova.(AU)
Assuntos
Animais , Reprodução/fisiologia , Ciclídeos/genética , Melhoramento Genético/métodos , Animais Endogâmicos/genética , Animais não Endogâmicos/genéticaRESUMO
BACKGROUND: The dawn of the "omics" technologies has changed allergy research, increasing the knowledge and identification of new allergens. However, these studies have been almost restricted to Dermatophagoides spp. Although Blomia tropicalis has long been established as a clinically important source of allergens, a thorough proteomic characterization is still lacking for this dust mite. OBJECTIVE: To increase knowledge of B. tropicalis allergens through proteomic analysis. METHODS: Eleven in-bred lineages of B. tropicalis were obtained from 11 unique different pregnant females. Their somatic extracts were analyzed and compared with a commercially available extract by liquid chromatography tandem mass spectrometry (LC-MS/MS). RESULTS: Considerable differences in the protein expression profiles were found among the breeds, and most of them displayed higher expression levels of major allergens than the commercially available extract. Blo t 2 was the most prominent allergenic protein in the analyzed extracts. Six identified allergens and 14 isoforms have not yet been recognized by IUIS. Conversely, 3 previously recognized B. tropicalis allergens were not found. CONCLUSIONS: The clear impact of inbreeding on allergen content shown by our study leads us to conclude that the quantification and/or identification of allergens from in-bred lines should be routinely considered for mite cultivation in order to select breeds with higher amounts of major allergens. In this sense, LC-MS/MS may be a useful method to achieve this quality control for research and commercial purposes.
Assuntos
Alérgenos/imunologia , Extratos Celulares/imunologia , Hipersensibilidade/imunologia , Feromônios/imunologia , Sarcoptidae/imunologia , Alérgenos/isolamento & purificação , Animais , Animais Endogâmicos , Variação Biológica da População , Extratos Celulares/química , Cromatografia Líquida , Feminino , Humanos , Feromônios/isolamento & purificação , Gravidez , Especificidade da Espécie , Espectrometria de Massas em Tandem , TranscriptomaRESUMO
Industry requires non-destructive real-time methods for quality control of meat in order to improve production efficiency and meet consumer expectations. Near Infrared Hyperspectral Images were used for tenderness evaluation of Nellore beef and the construction of tenderness distribution maps. To investigate whether the selection of the region of interest (ROI) in the image at the exact location where the shear force core was collected improves tenderness prediction and classification models, 50 samples from Longissimus muscle were imaged (1000-2500â¯nm) and shear force were measured (Warner-Bratzler). The data were analyzed by chemometric techniques (Partial Least Squares together with discriminant analysis - PLS-DA). Classification models using local ROI presented better performance than the ROI models of the whole sample (external validation sensitivity for the tough classâ¯=â¯33% and 70%, respectively), but none could be considered as successful model. However, the more general model had better performance in the tenderness distribution maps, with 72% of predicted images correctly classified.
Assuntos
Inspeção de Alimentos/métodos , Qualidade dos Alimentos , Carne/análise , Modelos Biológicos , Músculos Paraespinais/química , Matadouros , Animais , Animais Endogâmicos , Brasil , Calibragem , Bovinos , Análise Discriminante , Estudos de Viabilidade , Inspeção de Alimentos/instrumentação , Análise dos Mínimos Quadrados , Análise de Componente Principal , Reprodutibilidade dos Testes , Resistência ao Cisalhamento , Espectroscopia de Luz Próxima ao InfravermelhoRESUMO
Porcine ear size is an important characteristic for distinguishing among pig breeds. In a previous genome-wide association study of porcine ear size, LEM domain-containing 3 (LEMD3), methionine sulfoxide reductase B3 (MSRB3), high mobility group AT-hook 2 (HMGA2), and Wnt inhibitory factor 1 (WIF1) were implicated as important candidate genes for ear size. This study investigated the expression levels of four candidate genes for ear size in Erhualian and Large White pigs. Ten Erhualian pigs with large ears and eight Large White pigs with small ears at 60 days of age were examined. The mRNA expression levels of the four candidate genes were quantified by real-time polymerase chain reaction. WIF1 mRNA expression was significantly higher in Large White than in Erhualian pigs (P < 0.05), whereas the expression levels of the other three genes were not significantly different between the two breeds. The protein expression levels of the four genes were analyzed using western blot. WIF1 protein expression was significantly higher in Large White than in Erhualian pigs (P < 0.01), whereas MSRB3 protein expression was significantly higher in Erhualian than in Large White pigs (P < 0.05). There were no significant differences between the two breeds in residual protein expression. These results suggest that WIF1 is the main causal gene for ear size in pigs.
Assuntos
Orelha/crescimento & desenvolvimento , Locos de Características Quantitativas , Suínos/genética , Animais , Animais Endogâmicos , Proteínas da Matriz Extracelular/genética , Proteínas da Matriz Extracelular/metabolismo , Perfilação da Expressão Gênica , Estudo de Associação Genômica Ampla , Peptídeos e Proteínas de Sinalização Intercelular/genética , Peptídeos e Proteínas de Sinalização Intercelular/metabolismo , Metionina Sulfóxido Redutases/genética , Metionina Sulfóxido Redutases/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismoRESUMO
A total of 127 Nellore bulls classified as low and high residual feed intake (RFI), from three selection lines, were evaluated in five experiments aiming to identify associations between RFI, carcass, and meat quality traits. Feedlot performance, carcass traits, and meat quality of Longissimus muscle were evaluated. A mixed model including the fixed effects of RFI class, selection line, interaction between RFI class and selection line, and age at slaughter as a covariate, and the random effects of diet within experiment and experiment was used, with means compared by the t-test. Feed intake average difference was 0.962kg/day; low RFI animals consumed 0.479kg/day less feed and high RFI animals consumed 0.483kg/day more feed than expected. No differences between RFI classes were detected for most of studied variables, demonstrating the absence of unfavorable associations between RFI and carcass and meat quality traits. Low RFI Nellore animals use feed efficiently and produce good quality carcasses and meat.
Assuntos
Ingestão de Energia , Qualidade dos Alimentos , Carne/análise , Modelos Biológicos , Músculo Esquelético/crescimento & desenvolvimento , Matadouros , Animais , Animais Endogâmicos , Comportamento Animal , Brasil , Bovinos , Culinária , Gorduras na Dieta , Armazenamento de Alimentos , Concentração de Íons de Hidrogênio , Masculino , Músculo Esquelético/metabolismo , Pigmentos Biológicos/análise , Estações do Ano , Aumento de PesoRESUMO
The objective of this study was to compare SNP-BLUP, BayesCπ, BayesC and Bayesian Lasso methodologies to predict the direct genomic value for saturated, monounsaturated, and polyunsaturated fatty acid profile, omega 3 and 6 in the Longissimus thoracis muscle of Nellore cattle finished in feedlot. A total of 963 Nellore bulls with phenotype for fatty acid profiles, were genotyped using the Illumina BovineHD BeadChip (Illumina, San Diego, CA) with 777,962 SNP. The predictive ability was evaluated using cross validation. To compare the methodologies, the correlation between DGV and pseudo-phenotypes was calculated. The accuracy varied from -0.40 to 0.62. Our results indicate that none of the methods excelled in terms of accuracy, however, the SNP-BLUP method allows obtaining less biased genomic evaluations, thereby; this method is more feasible when taking into account the analyses' operating cost. Despite the lowest bias observed for EBV, the adjusted phenotype is the preferred pseudophenotype considering the genomic prediction accuracies regarding the context of the present study.
Assuntos
Ácidos Graxos/análise , Genômica/métodos , Carne/análise , Modelos Genéticos , Proteínas Musculares/genética , Músculo Esquelético/metabolismo , Polimorfismo de Nucleotídeo Único , Animais , Animais Endogâmicos , Teorema de Bayes , Brasil , Bovinos , Ácidos Graxos/metabolismo , Ácidos Graxos Monoinsaturados/metabolismo , Ácidos Graxos Ômega-3/metabolismo , Ácidos Graxos Ômega-6/metabolismo , Estudos de Viabilidade , Humanos , Masculino , Proteínas Musculares/metabolismo , Músculo Esquelético/crescimento & desenvolvimento , Valor Nutritivo , Seleção GenéticaRESUMO
Dietary rumen-protected polyunsaturated fatty acids (PUFAs) rich in linoleic acid (LA) may affect embryo yield, and LA can modulate the molecular mechanisms of lipid uptake in bovine blastocysts produced in vitro. In embryos, membrane lipids, such as phosphatidylcholines (PCs) and sphingomyelins (SMs), affect cryopreservation success. The aim of the present study was to evaluate embryonic developmental rates after the IVF of oocytes retrieved from Nellore heifers fed for approximately 90 days with rumen-protected PUFAs rich in LA. In addition, we evaluated embryo cryotolerance and the membrane structure lipid composition using matrix-assisted laser desorption ionisation mass spectrometry of fresh and vitrified embryos. Embryo development to the blastocyst stage (mean 43.2%) and embryo survival after vitrification and warming (mean 79.3%) were unaffected by diet. The relative abundance of one lipid species (PC ether (PCe; 38:2, which means that this lipid has 38 carbon atoms and 2 double bonds in the fatty acyl residues) was increased after PUFAs supplementation. However, 10 ions were affected by cryopreservation; ions consistent with PC 32:0, PC 34:1, SM 24:1, PC 40:6 or PC 42:9, PC plasmalogen (PCp) 44:10 or PC 42:7, triacylglycerol (TAG) 54:9 and a not assigned ion (m/z 833.2) were lower in blastocysts that survived to the cryopreservation process compared with fresh blastocysts, whereas the abundance of the ions PC 36:3 or PC 34:0, PCe 38:2 or PC 36:6 and PC 36:5 or PCe 38:1 were increased after cryopreservation. Thus, the results demonstrate that the mass spectrometry profiles of PC, SM and TAG species differ significantly in bovine blastocysts upon cryopreservation. Because the lipid ion abundances of fresh and vitrified-warmed embryos were distinct, they can be used as potential markers of post-cryopreservation embryonic survival.
Assuntos
Criopreservação/veterinária , Gorduras Insaturadas na Dieta/administração & dosagem , Ectogênese , Embrião de Mamíferos/metabolismo , Fenômenos Fisiológicos da Nutrição Materna , Lipídeos de Membrana/metabolismo , Oocistos/metabolismo , Animais , Animais Endogâmicos , Blastocisto , Brasil , Bovinos , Estudos Cross-Over , Embrião de Mamíferos/citologia , Feminino , Fertilização in vitro/veterinária , Técnicas de Maturação in Vitro de Oócitos/veterinária , Ácido Linoleico/administração & dosagem , Ácido Linoleico/metabolismo , Masculino , Lipídeos de Membrana/química , Oocistos/citologia , Oocistos/isolamento & purificação , Recuperação de Oócitos/veterinária , Plasmalogênios/química , Plasmalogênios/metabolismo , Preservação do Sêmen/veterinária , VitrificaçãoRESUMO
Glyphosate is the active ingredient of several herbicide formulations. Different reports suggest that glyphosate-based herbicides (GBHs) may act as endocrine disruptors. We evaluated the potential estrogenic effects of a GBH formulation using the uterotrophic assay. Adult ovariectomized rats were sc injected for 3 consecutive days with: saline solution (vehicle control), 2.10-5 g E2 /kg/day (uterotrophic dose; UE2 ), 2.10-7 g E2 /kg/day (nonuterotrophic dose; NUE2 ), or 0.5, 5, or 50 mg GBH/kg/day of the. Twenty-four hours after the last injection, the uterus was removed and weighed and processed for histopathology and mRNA extraction. Epithelial cell proliferation and height and expression of estrogen-responsive genes were evaluated (estrogen receptors, ERα and ERß; progesterone receptor, PR; complement 3, C3). Uterine weight and epithelial proliferation were not affected by GBH. However, the luminal epithelial cell height increased at GBH0.5. ERα mRNA was downregulated by all GBH doses and E2 groups, whereas PR and C3 mRNA were diminished by GBH0.5. GBH5-, GBH50-, and UE2 -treated rats showed downregulated ERα protein expression in luminal epithelial cells, while the receptor was upregulated in the stroma. GBH upregulated ERß (GBH0.5-50) and PR (GBH5) expressions in glandular epithelial cells, similar effect to that of NUE2 group. These results indicate that, although the uterine weight was not affected, GBH modulates the expression of estrogen-sensitive genes. © 2016 Wiley Periodicals, Inc. Environ Toxicol 32: 1191-1201, 2017.
Assuntos
Glicina/análogos & derivados , Herbicidas/toxicidade , Útero/efeitos dos fármacos , Animais , Animais Endogâmicos , Estradiol/fisiologia , Receptor alfa de Estrogênio/genética , Receptor alfa de Estrogênio/metabolismo , Receptor beta de Estrogênio/genética , Receptor beta de Estrogênio/metabolismo , Feminino , Expressão Gênica/efeitos dos fármacos , Glicina/toxicidade , Tamanho do Órgão/efeitos dos fármacos , Ovariectomia , Ratos , Ratos Wistar , Receptores de Progesterona/genética , Receptores de Progesterona/metabolismo , Útero/metabolismo , Útero/patologia , GlifosatoRESUMO
Objetivou-se avaliar a estrutura populacional de 91.579 animais da raça Nelore criados no Semiárido Nordestino, nascidos entre 1965 e 2011. Analisaram-se o pedigree e a estimação dos parâmetros populacionais baseados na probabilidade de origem do gene. Nos primeiros anos, registraram-se nascimentos superiores de fêmeas, tendendo ao equilíbrio entre os sexos com o passar dos anos. Os números de efetivo de animais fundadores (fe) e ancestrais (fa) indicaram a utilização reduzida de animais na formação genética do rebanho. Dentre 24.676 ancestrais, 450 foram responsáveis por 50% da variabilidade genética da população. Dos 10 fundadores de maior importância, 8 se apresentam dentre os 10 ancestrais; o indivíduo com maior expressão apresentou coeficiente de relação médio (CR) de 1,31%, explicando 1,81% da variabilidade. 72% dos animais têm pais e mães identificados, observando-se perda de informação entre as gerações. 100% dos rebanhos utilizam touros externos e 61% deles vendem touros, não havendo classificação núcleo ou isolado. Endogamia variou de 0,14% na segunda geração a 0,73% na oitava, enquanto que o CR oscilou de 0,8% a 0,35% entre a primeira e a quarta geração, decrescendo a partir da quinta. Observou-se um intervalo médio de gerações de 8,3 anos. O rebanho possui número reduzido de animais na formação genética e pequena integralidade do pedigree, dificultando a estimativa de alguns parâmetros populacionais.(AU)
The objective of this study was to evaluate the population structure of 91,579 Nellore cattle reared in the Northeast semi-arid, born between 1965 and 2011. We analyzed the pedigree and the estimation of population parameters based on the probability of gene origin. In the early years, a higher number of female births occured, tending to gender balance over the years. The number of founder animals (fe) and ancestors (fa) indicated the reduced use of animals in the genetic formation of the herd. Among 2,4676 ancestors, 450 were responsible for 50% of the genetic variability of the population. Of the 10 most important founders, 8 were among the 10 ancestors. The individual with the highest expression presented a mean coefficient of relationship (CR) of 1.31%, explaining 1.81% of the variability. 72% of animals have identified fathers and mothers, revealing loss of information between generations. 100% of the herds use external bulls and 61% of them sell bulls, with no core classification or isolate. Inbreeding ranged from 0.14% in the second generation to 0.73% in the eighth, while the CR ranged from 0.8% to 0.35% between the first and fourth generations, decreasing from the fifth on. The average generation interval observed was of 8.3 years. The herd has a small number of animals in the genetic make-up, and small completeness of pedigree, making it difficult to estimate some population parameters.(AU)
Assuntos
Animais , Bovinos , Endogamia/estatística & dados numéricos , Intervalo entre Gerações , Variação Genética , Animais Endogâmicos , Relação entre Gerações , Genética PopulacionalRESUMO
Objetivou-se avaliar a estrutura populacional de 91.579 animais da raça Nelore criados no Semiárido Nordestino, nascidos entre 1965 e 2011. Analisaram-se o pedigree e a estimação dos parâmetros populacionais baseados na probabilidade de origem do gene. Nos primeiros anos, registraram-se nascimentos superiores de fêmeas, tendendo ao equilíbrio entre os sexos com o passar dos anos. Os números de efetivo de animais fundadores (fe) e ancestrais (fa) indicaram a utilização reduzida de animais na formação genética do rebanho. Dentre 24.676 ancestrais, 450 foram responsáveis por 50% da variabilidade genética da população. Dos 10 fundadores de maior importância, 8 se apresentam dentre os 10 ancestrais; o indivíduo com maior expressão apresentou coeficiente de relação médio (CR) de 1,31%, explicando 1,81% da variabilidade. 72% dos animais têm pais e mães identificados, observando-se perda de informação entre as gerações. 100% dos rebanhos utilizam touros externos e 61% deles vendem touros, não havendo classificação núcleo ou isolado. Endogamia variou de 0,14% na segunda geração a 0,73% na oitava, enquanto que o CR oscilou de 0,8% a 0,35% entre a primeira e a quarta geração, decrescendo a partir da quinta. Observou-se um intervalo médio de gerações de 8,3 anos. O rebanho possui número reduzido de animais na formação genética e pequena integralidade do pedigree, dificultando a estimativa de alguns parâmetros populacionais.
The objective of this study was to evaluate the population structure of 91,579 Nellore cattle reared in the Northeast semi-arid, born between 1965 and 2011. We analyzed the pedigree and the estimation of population parameters based on the probability of gene origin. In the early years, a higher number of female births occured, tending to gender balance over the years. The number of founder animals (fe) and ancestors (fa) indicated the reduced use of animals in the genetic formation of the herd. Among 2,4676 ancestors, 450 were responsible for 50% of the genetic variability of the population. Of the 10 most important founders, 8 were among the 10 ancestors. The individual with the highest expression presented a mean coefficient of relationship (CR) of 1.31%, explaining 1.81% of the variability. 72% of animals have identified fathers and mothers, revealing loss of information between generations. 100% of the herds use external bulls and 61% of them sell bulls, with no core classification or isolate. Inbreeding ranged from 0.14% in the second generation to 0.73% in the eighth, while the CR ranged from 0.8% to 0.35% between the first and fourth generations, decreasing from the fifth on. The average generation interval observed was of 8.3 years. The herd has a small number of animals in the genetic make-up, and small completeness of pedigree, making it difficult to estimate some population parameters.
Assuntos
Animais , Bovinos , Animais Endogâmicos , Endogamia/estatística & dados numéricos , Intervalo entre Gerações , Variação Genética , Genética Populacional , Relação entre GeraçõesRESUMO
An extremely high (about 100 %) increase in longevity is reported for a subset of recombinant inbred lines (RILs) of Drosophila melanogaster subjected to a cyclic heat stress throughout the adult life. Previous work showed that both longevity and heat sensitivity highly differed among RILs. The novel heat stress treatment used in this study consisted of 5 min at 38 °C applicated approximately every 125 min throughout the adult life starting at the age of 2 days. In spite of the exceptionally high increase in longevity in a set of RILs, the same heat stress treatment reduced rather than increased longevity in other RILs, suggesting that heat-induced hormesis is dependent on the genotype and/or the genetic background. Further, one quantitative trait locus (QTL) was identified for heat-induced hormesis on chromosome 2 (bands 28A1-34D2) in one RIL panel (RIL-D48) but it was not significant in its reciprocal panel (RIL-SH2). The level of heat-induced hormesis showed a sexual dimorphism, with a higher number of lines exhibiting higher hormesis effects in males than in females. The new heat stress treatment in this study suggests that longevity can be further extended than previously suggested by applying a cyclic and mild stress throughout the life, depending on the genotype.
Assuntos
Envelhecimento/genética , Drosophila melanogaster/genética , Resposta ao Choque Térmico/genética , Longevidade/genética , Animais , Animais Endogâmicos/genética , Proteínas de Drosophila/genética , Feminino , Regulação da Expressão Gênica no Desenvolvimento/genética , Hormese/genética , Masculino , Locos de Características Quantitativas/genética , Recombinação Genética/genética , Caracteres Sexuais , Termotolerância/genéticaRESUMO
BACKGROUND: The restoration of complex tissue deficits with vascularized composite allotransplantation is a paradigm shift in reconstructive surgery. Clinical adoption of vascularized composite allotransplantation is limited by the need for systemic immunosuppression, with associated morbidity and mortality. Small-animal models lack the biological fidelity and preclinical relevance to enable translation of immunologic insights to humans. Large-animal models have been described; however, limitations persist, including the inability of heterotopic models to evaluate functional nerve regeneration, and the sensitivity of primates to toxicity of immunosuppressive drugs. The authors' novel orthotopic porcine limb transplant model has broad applicability and translational relevance to both immunologic and functional outcomes after vascularized composite allotransplantation. METHODS: Recipients underwent amputation at a level corresponding to the mid forearm. Replantation or transplantation of grafts was performed by plate fixation of the radio-ulna, microsurgical repair of brachial artery and median nerve, and extensor and flexor tendon repairs. Viability of replants was monitored clinically and radiologically. Transplants were monitored for clinicopathologic signs of rejection. Animals mobilized freely postoperatively. RESULTS: Replantations remained viable until the endpoint of 14 days. Transplants developed Banff grade 4 acute rejection by postoperative day 7. Doppler sonography and angiography confirmed vascular patency. Serial biopsy specimens of skin and histopathology of replants at endpoint confirmed tissue viability and bone healing. CONCLUSIONS: An orthotopic load-bearing porcine forelimb vascularized composite allotransplantation model was successfully established. Technical, procedural, and logistic considerations were optimized to allow model use for immunologic, bone healing, functional nerve regeneration, and other translational studies.
Assuntos
Membro Anterior/transplante , Pesquisa Translacional Biomédica , Alotransplante de Tecidos Compostos Vascularizados/métodos , Animais , Animais Endogâmicos , Regeneração Óssea/fisiologia , Rejeição de Enxerto/patologia , Rejeição de Enxerto/fisiopatologia , Sobrevivência de Enxerto/fisiologia , Haplótipos , Teste de Histocompatibilidade , Suínos , Coleta de Tecidos e Órgãos/métodos , Suporte de Carga/fisiologiaRESUMO
Angus steers were grazed on unsupplemented pasture (CNTRL), pasture supplemented with 0.7% BW cracked corn (FLAX-0), FLAX-0 with 0.125% and 0.250% BW of whole flaxseed (FLAX-1 and FLAX-2). Six steers were grazed per treatment for 70 days, with start and finish weights of 458 and 508 kg. At 24 h post slaughter, longissimus thoracis were harvested, and steaks assigned to treatments of postmortem aging time under vacuum (PM; 3, 14 and 56 days) with or without five days of aerobic exposure (AE). Meat antioxidant status was higher (P<0.05) when feeding CNTRL and FLAX-1 than FLAX-0 and FLAX-2. Under AE, lipid oxidation was highest for FLAX-2 (P<0.05), and lowest for FLAX-1. Greatest TBARs and lowest antioxidant capacity and redness values were obtained with AE and the longer PM (P<0.05). Beef oxidative stability through AE improved by adding a low flaxseed level to supplemented corn grain, but deteriorated by adding a high flaxseed level or by extending PM.
Assuntos
Antioxidantes/metabolismo , Dieta/veterinária , Linho/química , Peroxidação de Lipídeos , Músculo Esquelético/metabolismo , Sementes/química , Zea mays/química , Animais , Animais Endogâmicos , Antioxidantes/análise , Argentina , Bovinos , Dieta/efeitos adversos , Gorduras na Dieta/análise , Linho/efeitos adversos , Embalagem de Alimentos , Qualidade dos Alimentos , Armazenamento de Alimentos , Herbivoria , Humanos , Masculino , Carne/análise , Músculo Esquelético/crescimento & desenvolvimento , Oxirredução , Pigmentos Biológicos/análise , Pigmentos Biológicos/biossíntese , Sementes/efeitos adversos , Aumento de PesoRESUMO
The aim of the present study was to evaluate the effects of heat stress (HS) and methionine supplementation on the markers of stress and on the gene expression levels of uncoupling proteins (UCP), betaine-homocysteine methyltransferase (BHMT), cystathionine ß-synthase (CBS), glutathione synthetase (GSS) and glutathione peroxidase 7 (GPx7). Broilers from 1 to 21 d and from 22 to 42 d of age were divided into three treatment groups related to methionine supplementation: without methionine supplementation (MD); recommended level of methionine supplementation (DL1); excess methionine supplementation (DL2). The broilers were either kept at a comfortable thermal temperature or exposed to HS (38°C for 24 h). During the starter period, we observed the effects of the interaction between diet and environment on the gene expression levels of UCP, BHMT and GSS. Higher gene expression levels of UCP and BHMT were observed in broilers that were maintained at thermal comfort conditions and received the MD diet. HS broilers fed the DL1 and DL2 diets had the highest expression level of GSS. The expression levels of the CBS and GPx7 genes were influenced by both the environment and methionine supplementation. During the grower period, the gene expression levels of BHMT, CBS, GSS and GPx7 were affected by the diet × environment interaction. A higher expression level of BHMT was observed in broilers maintained at thermal comfort conditions and on the MD diet. HS induced higher expression levels of CBS, GSS and GPx7 in broilers that received the DL1 and DL2 diets. The present results suggest that under HS conditions, methionine supplementation could mitigate the effects of stress, since methionine contributed to the increased expression levels of genes related to antioxidant activity.
Assuntos
Doenças das Aves/prevenção & controle , Dieta/veterinária , Regulação da Expressão Gênica no Desenvolvimento , Transtornos de Estresse por Calor/veterinária , Metionina/uso terapêutico , Estresse Oxidativo , Músculos Peitorais/enzimologia , Animais , Animais Endogâmicos , Antioxidantes/administração & dosagem , Antioxidantes/uso terapêutico , Proteínas Aviárias/genética , Proteínas Aviárias/metabolismo , Betaína-Homocisteína S-Metiltransferase/genética , Betaína-Homocisteína S-Metiltransferase/metabolismo , Biomarcadores/sangue , Biomarcadores/metabolismo , Doenças das Aves/dietoterapia , Doenças das Aves/metabolismo , Doenças das Aves/patologia , Galinhas , Ingestão de Energia , Glutationa Peroxidase/genética , Glutationa Peroxidase/metabolismo , Glutationa Sintase/genética , Glutationa Sintase/metabolismo , Transtornos de Estresse por Calor/dietoterapia , Transtornos de Estresse por Calor/metabolismo , Transtornos de Estresse por Calor/prevenção & controle , Homocisteína/sangue , Canais Iônicos/genética , Canais Iônicos/metabolismo , Isoenzimas/genética , Isoenzimas/metabolismo , Masculino , Metionina/administração & dosagem , Proteínas Mitocondriais/genética , Proteínas Mitocondriais/metabolismo , Músculos Peitorais/metabolismo , Músculos Peitorais/patologia , Proteína Desacopladora 1 , Aumento de PesoRESUMO
O objetivo neste estudo foi avaliar a estrutura genética da população de bovinos da raça Girolando no Brasil. Analisou-se o arquivo de pedigree de 26.969 animais, composto de 3.031 machos e 23.938 fêmeas. O nível de conteúdo de informação do pedigree na geração atual foi 61%, mostrando ser de qualidade moderada. O coeficiente de endogamia médio e o coeficiente de relação médio da população Girolando foram 0,11 e 0,13%, respectivamente. O tamanho efetivo da população, considerando a geração completa traçada, foi 188, acima do nível crítico. Do total de 9.457 ancestrais que contribuíram para a população de referência, 457 explicaram 50% da variabilidade genética da população. O número efetivo de fundadores foi 551 e o de ancestrais 393. O intervalo médio de geração foi de 5,26 anos, sendo ligeiramente maior nas trilhas gaméticas mãe-filho e pai-filha. A partir dos coeficientes estimados, pode-se concluir que a endogamia nos rebanhos da raça Girolando foi de pequena magnitude e que as práticas de acasalamento foram adequadas durante o período avaliado. No entanto, é importante continuar com o monitoramento desses coeficientes a fim de prevenir perda de variabilidade genética.(AU)
The aim of this study was to evaluate the population structure of Girolando cattle in Brazil. The pedigree file contained 26,969 individuals, from which 3,031 were males and 23,938 were females. The average level of completeness of the pedigree in the current generation was of reasonable quality (61%). Inbreeding and average relatedness coefficients were low: 0.11 and 0.13%, respectively. Estimates of effective population size considering the full generations traced was 188, which is above the critical level range. The number of ancestors that contributed to the reference population was 9,457 animals, from which 457 explained 50% of the genetic variability of the population. The effective number of founders and the effective number of ancestors in this population were, respectively, 551 and 393. The average generation interval was 5.26 years, slightly higher in genetic pathways dam-son and sire-daughter. The inbreeding in the Girolando breed was of small magnitude, indicating that the current practices of mating were adequate during the study period. However, it is important to continue monitoring these coefficients in order to prevent loss of genetic variability.(AU)
Assuntos
Animais , Bovinos , Bovinos/genética , Variação Genética , Animais EndogâmicosRESUMO
O objetivo neste estudo foi avaliar a estrutura genética da população de bovinos da raça Girolando no Brasil. Analisou-se o arquivo de pedigree de 26.969 animais, composto de 3.031 machos e 23.938 fêmeas. O nível de conteúdo de informação do pedigree na geração atual foi 61%, mostrando ser de qualidade moderada. O coeficiente de endogamia médio e o coeficiente de relação médio da população Girolando foram 0,11 e 0,13%, respectivamente. O tamanho efetivo da população, considerando a geração completa traçada, foi 188, acima do nível crítico. Do total de 9.457 ancestrais que contribuíram para a população de referência, 457 explicaram 50% da variabilidade genética da população. O número efetivo de fundadores foi 551 e o de ancestrais 393. O intervalo médio de geração foi de 5,26 anos, sendo ligeiramente maior nas trilhas gaméticas mãe-filho e pai-filha. A partir dos coeficientes estimados, pode-se concluir que a endogamia nos rebanhos da raça Girolando foi de pequena magnitude e que as práticas de acasalamento foram adequadas durante o período avaliado. No entanto, é importante continuar com o monitoramento desses coeficientes a fim de prevenir perda de variabilidade genética.
The aim of this study was to evaluate the population structure of Girolando cattle in Brazil. The pedigree file contained 26,969 individuals, from which 3,031 were males and 23,938 were females. The average level of completeness of the pedigree in the current generation was of reasonable quality (61%). Inbreeding and average relatedness coefficients were low: 0.11 and 0.13%, respectively. Estimates of effective population size considering the full generations traced was 188, which is above the critical level range. The number of ancestors that contributed to the reference population was 9,457 animals, from which 457 explained 50% of the genetic variability of the population. The effective number of founders and the effective number of ancestors in this population were, respectively, 551 and 393. The average generation interval was 5.26 years, slightly higher in genetic pathways dam-son and sire-daughter. The inbreeding in the Girolando breed was of small magnitude, indicating that the current practices of mating were adequate during the study period. However, it is important to continue monitoring these coefficients in order to prevent loss of genetic variability.