RESUMO

The opposing forces of gene flow and isolation are two major processes shaping genetic diversity. Understanding how these vary across space and time is necessary to identify the environmental features that promote diversification. The detection of considerable geographic structure in taxa from the arid Nearctic has prompted research into the drivers of isolation in the region. Several geographic features have been proposed as barriers to gene flow, including the Colorado River, Western Continental Divide (WCD), and a hypothetical Mid-Peninsular Seaway in Baja California. However, recent studies suggest that the role of barriers in genetic differentiation may have been overestimated when compared to other mechanisms of divergence. In this study, we infer historical and spatial patterns of connectivity and isolation in Desert Spiny Lizards (Sceloporus magister) and Baja Spiny Lizards (Sceloporus zosteromus), which together form a species complex composed of parapatric lineages with wide distributions in arid western North America. Our analyses incorporate mitochondrial sequences, genomic-scale data, and past and present climatic data to evaluate the nature and strength of barriers to gene flow in the region. Our approach relies on estimates of migration under the multispecies coalescent to understand the history of lineage divergence in the face of gene flow. Results show that the S. magister complex is geographically structured, but we also detect instances of gene flow. The WCD is a strong barrier to gene flow, while the Colorado River is more permeable. Analyses yield conflicting results for the catalyst of differentiation of peninsular lineages in S. zosteromus. Our study shows how large-scale genomic data for thoroughly sampled species can shed new light on biogeography. Furthermore, our approach highlights the need for the combined analysis of multiple sources of evidence to adequately characterize the drivers of divergence.

Assuntos

Fluxo Gênico , Lagartos , Animais , Lagartos/genética , Lagartos/classificação , Clima Desértico , Filogenia , México , Genômica

RESUMO

Organisms rapidly diversifying across unstable environments such as mountain tops provide substantial challenges for resolving evolutionary histories and delimiting species. The Liolaemus leopardinus clade is a group of five species of lizards adapted to high altitudes in central Chile, with most species found in the Andes, but one species, L. frassinettii is found in the independent Costa Cordillera. Despite their allopatric distributions, they display shallow mitochondrial divergences, making phylogenetics and species delimitation of this clade hard to resolve. We use an integrative approach to delimit species by considering morphological data (linear and landmark-based), mitochondrial DNA (mtDNA), and nuclear DNA (Sequences and SNPs collected with ddRADseq). We find strong conflicting signals between phylogenetic analyses of the nuclear and mtDNA data. While mtDNA places L. frassinettii as sister to the rest of the clade, the SNPs support a south to north order of divergences, with southernmost species (new taxon described here) as sister to the rest of the clade. Moreover, species delimitation using mtDNA only supports two species (one in the Costa and one in the Andes), whereas combined analyses using the nuclear data and morphology support multiple Andean taxa, including a new one we describe here. Based on these results, population structure analyses and our knowledge of the geological and climatic history of the Andes, we argue that this mito-nuclear discordance is explained by past introgression among the Andean taxa, likely during glacial periods that forced these lizards to lower altitudes where they would hybridize. The complete isolation between the Costa and Andes cordilleras has prevented any further contact between taxa on either mountain chain. Our study highlights the importance of using multiple lines of evidence to resolve evolutionary histories, and the potential misleading results from relying solely on mtDNA.

Assuntos

Especiação Genética , Lagartos/classificação , Lagartos/genética , Filogenia , Altitude , Animais , Chile , DNA Mitocondrial/genética , Genoma/genética , Hibridização Genética , Polimorfismo de Nucleotídeo Único/genética

RESUMO

Integrative taxonomy has been generally considered as a goal in systematics for more than a decade. Here, we employed environmental, molecular, and morphological data to evaluate the species boundaries within the short-nosed skink Plestiodon brevirostris from south-central Mexico, one member of the morphologically conservative P. brevirostris group. Our molecular dataset includes one mitochondrial and two nuclear loci. The mitochondrial fragment includes the full length of the gene coding for the NADH dehydrogenase subunit 1 protein, a segment of the gene coding for 16S ribosomal RNA, and flanking tRNAs. The nuclear dataset includes fragments of the genes coding for the megakaryoblastic leukemia 1 and RNA fingerprint 35 proteins. We employed phylogenetic reconstruction, analyses of population structure and morphological variation, and species delimitation methods (including the integration of the three kinds of data in a unified probabilistic framework) to evaluate species limits. Our results suggest that P. brevirostris represents four distinct species. The information provided by each kind of data allowed us to discern between alternative explanations for the observed patterns of geographic structure. Two of the newly recognized lineages are poorly differentiated morphologically but apparently differ in environmental preferences and are allopatric. Additionally, one lineage is microendemic and parapatric with respect to another one. Moreover, our phylogenetic analyses suggest that other taxa within the P. brevirostris group may represent species complexes. We discuss our results in the context of integrative species delimitation.

Assuntos

Lagartos/classificação , Filogenia , Animais , Teorema de Bayes , DNA Mitocondrial/genética , Loci Gênicos , Geografia , Lagartos/genética , México , Mitocôndrias/genética , RNA Ribossômico 16S/genética , Reprodutibilidade dos Testes , Especificidade da Espécie , Fatores de Tempo

RESUMO

A new species of the Rhadinaeadecorata group is described based on two specimens from the Sierra Madre del Sur, Guerrero, Mexico. The new species differs from all other members of the genus Rhadinaea by having: eight supralabials; 149-151 (male) ventrals; 63-77 (male) subcaudals; two large pale nuchal blotches, forming an incomplete collar that occupies two scales laterally and is bissected along the dorsal midline; a postocular pale marking consisting of a well-defined, narrow line beginning behind the upper posterior margin of the eye and extending posteriorly nearly horizontally until connecting with the nuchal blotches; and the dark ground color of the flanks extending to the lateral portion of the ventrals. The large nuchal blotches distinguish the new species from the other members of the R.decorata group, except for R.cuneata and some individuals of R.hesperia (pale nuchal marking one-scale wide in R.marcellae, absent in the other species). The condition of the postocular pale marking distinguishes it from R.cuneata and R.hesperia (postocular pale marking wedge-shaped in R.cuneata, not connected with the pale post-cephalic markings in R.hesperia). Furthermore, the number of subcaudals and the coloration of the lateral portion of the ventrals distinguish it from R.omiltemana and R.taeniata, the remaining congeners found in Guerrero (85-90 in males of R.omiltemana and 91-121 in R.taeniata; dark color of the flanks not reaching ventrals in the former species, occasionally and faintly in R.taeniata). Additionally, a new combination for R.stadelmani is proposed. The new species is the first described in the genus Rhadinaea in more than 40 years.

RESUMO

We describe a new species of Plestiodon in the P. brevirostris group from the Balsas Basin in central Mexico. It is distinguished from the other species in the group by the following combination of traits: supraoculars four; interparietal enclosed posteriorly by parietals; primary temporal present; seventh supralabial usually contacting upper secondary temporal; longitudinal dorsal scale rows around midbody 23-26; Toe-IV lamellae 13-15; limbs not overlapping when adpressed against body; dorsolateral light line extending posteriorly to level of posterior end of anterior fourth of body or beyond; light median line absent in all growth stages; primary lateral dark lines separated medially by six dorsal scale rows and upper half of adjacent row on each side at level of midbody; lower secondary dark line faint at level of neck; and light coloration of supralabials extending ventrally to lip border. Analyses based on DNA sequences of three loci support the distinctiveness of the new species, as well as its sister species relationship with P. ochoterenae. The Environmental Vulnerability Score of the new species places it in the high vulnerability category.

Assuntos

Lagartos , Animais , Tamanho Corporal , México , Tamanho do Órgão

RESUMO

A new species of the Geophis dubius group is described from the mountains of the Sierra Zongolica in west-central Veracruz and the Sierra de Quimixtlán in central-east Puebla. The new species is most similar to Geophis duellmani and Geophis turbidus, which are endemic to the mountains of northern Oaxaca and the Sierra Madre Oriental of Puebla and Hidalgo, respectively. However, the new species differs from Geophis duellmani by the presence of postocular and supraocular scales and from Geophis turbidus by having a bicolor dorsum. With the description of the new species, the species number in the genus increases to 50 and to 12 in the Geophis dubius group. Additionally, a key to the species of the Geophis dubius group is provided.