RESUMEN
Campylobacter is a major cause of gastroenteritis worldwide, with broiler meat accounting for most illnesses. Antimicrobial intervention is recommended in severe cases of campylobacteriosis. The emergence of antimicrobial resistance (AMR) in Campylobacter is a concerning food safety challenge, and monitoring the trends of AMR is vital for a better risk assessment. This study aimed to characterize the phenotypic profiles and molecular markers of AMR and virulence in the prevalent Campylobacter species contaminating chilled chicken carcasses sampled from supermarkets in the United Arab Emirates (UAE). Campylobacter was detected in 90 (28.6%) out of 315 tested samples, and up to five isolates from each were confirmed using multiplex PCR. The species C. coli was detected in 83% (75/90) of the positive samples. Whole-genome sequencing was used to characterize the determinants of AMR and potential virulence genes in 45 non-redundant C. coli isolates. We identified nine resistance genes, including four associated with resistance to aminoglycoside (aph(3')-III, ant(6)-Ia, aph(2â³)-Ib, and aac(6')-Im), and three associated with Beta-lactam resistance (blaOXA-61, blaOXA-193, and blaOXA-489), and two linked to tetracycline resistance (tet(O/32/O), and tet(O)), as well as point mutations in gyrA (fluoroquinolones resistance), 23S rRNA (macrolides resistance), and rpsL (streptomycin resistance) genes. A mutation in gyrA 2 p.T86I, conferring resistance to fluoroquinolones, was detected in 93% (42/45) of the isolates and showed a perfect match with the phenotype results. The simultaneous presence of blaOXA-61 and blaOXA-193 genes was identified in 86.6% (39/45) of the isolates. In silico analysis identified 7 to 11 virulence factors per each C. coli isolate. Some of these factors were prevalent in all examined strains and were associated with adherence (cadF, and jlpA), colonization and immune evasion (capsule biosynthesis and transport, lipooligosaccharide), and invasion (ciaB). This study provides the first published evidence from the UAE characterizing Campylobacter virulence, antimicrobial resistance genotype, and phenotype analysis from retail chicken. The prevalent C. coli in the UAE retail chicken carries multiple virulence genes and antimicrobial resistance markers and exhibits frequent phenotype resistance to macrolides, quinolones, and tetracyclines. The present investigation adds to the current knowledge on molecular epidemiology and AMR development in non-jejuni Campylobacter species in the Middle East and globally.
RESUMEN
Foodborne pathogens have become a major concern not only due to the diseases they cause, but also because of the rise of antibiotic resistant strains in human and animals. The purposes of this study were to determine the occurrence of Campylobacter jejuni and Escherichia coli and their antibiotic resistance profiles in wild birds, chickens, humans, and the environment in Malay villages in Malaysia. Three Malay villages in Kota Setar, Kedah were chosen. Three hundred nine (309) samples were collected in this study including wild birds (38), chickens (71), humans (47), and the environment (153). Subsequently, the C. jejuni and E coli isolates were tested against antibiotics using the disc diffusion method. Campylobacter jejuni was found positive in 17 (37.8%) flies and 8 (11.3%) chickens. Also, E. coli was found positive in 89.4% of human, 47.4% of bird, 44 62% of chicken and in 71.2% of the environmental samples. Ten antibiotics were used to determine the susceptibility of the isolates. Eighty four percent (84%) of C. jejuni and 100% of E. coli isolates were found to show resistance towards at least one antibiotic. The isolates showed high resistance to cefpodoxime and tetracycline.
RESUMEN
Aims@#Campylobacter is a major cause of gastroenteritis in humans worldwide, particularly in developed countries and is reported to show an increased trend in antibiotic resistance. The purpose of this study was to determine the occurrence of Campylobacter in wild birds, poultry and in poultry environments in Selangor, Malaysia as well as to determine the rate of antibiotic resistance among Campylobacter isolates from poultry and wild birds. @*Methodology and results@#The wild birds were trapped near poultry farm areas and in open areas which were more than 5 km away from poultry farms (refered to as open environment). Of 57 wild birds trapped near the farm environment, 17.5% were positive for Campylobacter and out of these, 90% were Campylobacter jejuni. Of a total of 77 birds in the open environment, 22.1% were positive for Campylobacter and of these 88.7% were C. jejuni. The poultry farms consisted of 3 chicken and 2 duck farms. About 60% of the chickens and 44.8% of the ducks were positive for Campylobacter of which 80% were C. jejuni, while 20% were Campylobacter coli. The Campylobacter isolates were subjected to antibiotic susceptibility test using disk diffusion method against 12 antibiotics. All the isolates (100%) from wild birds around poultry houses were resistant to at least one antibiotic. @*Conclusion, significance and impact of study@#The findings showed 93% of the isolates from wild birds were resistant to at least two antibiotics. Campylobacter isolates from poultry in the farms were resistant to at least one antibiotic. The antibiotic resistant Campylobacter is of public health importance.