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1.
Phys Chem Chem Phys ; 17(7): 4945-51, 2015 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-25594082

RESUMEN

Because of their high electrical conductivity CoSi2 nanostructures are potential candidates for preparing ordered nano-arrays to be used as electrode interconnectors and contacts in microelectronic devices. We here describe a controlled procedure for the endotaxial growth of hexagonal CoSi2 nanoplatelets buried in differently oriented single crystalline Si wafers on which a Co-doped SiO2 thin film was previously deposited. These nanomaterials were obtained by a clean procedure consisting of isothermal annealing at 750 °C under a He atmosphere of Co-doped SiO2 thin films deposited onto the surface of three differently oriented flat Si substrates, namely Si(001), Si(011) and Si(111). Buried CoSi2 nanoplatelets are in all cases spontaneously formed as a consequence of the diffusion of Co atoms into the silicon wafer and their reaction with host Si atoms. Our TEM and GISAXS analyses demonstrated that these arrays, irrespective of host Si orientation, consist of CoSi2 hexagonal nanoplatelets in all cases parallel to Si{111} crystallographic planes. Additionally, the dimensions of the nanoplatelets were consistently determined by TEM and GISAXS for the three different host Si single crystal orientations.

2.
J Nanosci Nanotechnol ; 14(5): 3902-9, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24734661

RESUMEN

TiO2 thin films deposited by a vacuum arc on a glass substrate were characterized by X-ray reflectivity (XRR), X-ray diffraction (XRD), scanning electron microscopy (SEM) and atomic force microscopy (AFM). Several thin films with different amounts of deposited TiO2 mass and different deposition and annealing temperatures were studied. A qualitative analysis of the XRD patterns indicated the presence of the anatase and/or rutile crystalline phases in most of the studied samples. From the analysis of the experimental XRR curves--which exhibited a wide angular range of oscillatory behavior--the thickness, mass density and interface roughness were determined. All XRR patterns were well fitted by modeled curves that assume the presence of a single and homogeneous TiO2 layer over which a very thin H2O layer is adsorbed. The thickest H2O adsorption layers were developed in films with the highest anatase content. Our overall results of the XRR analyses are consistent with those derived from the imaging techniques (SEM and AFM).

3.
Rev Sci Instrum ; 84(1): 015102, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23387690

RESUMEN

The purpose of the designed reactor is (i) to obtain polycrystalline and∕or amorphous thin films by controlled deposition induced by a reactive sputtering magnetron and (ii) to perform a parallel in situ structural study of the deposited thin films by X-ray diffraction, in real time, during the whole growth process. The designed reactor allows for the control and precise variation of the relevant processing parameters, namely, magnetron target-to-sample distance, dc magnetron voltage, and nature of the gas mixture, gas pressure and temperature of the substrate. On the other hand, the chamber can be used in different X-ray diffraction scanning modes, namely, θ-2θ scanning, fixed α-2θ scanning, and also low angle techniques such as grazing incidence small angle X-ray scattering and X-ray reflectivity. The chamber was mounted on a standard four-circle diffractometer located in a synchrotron beam line and first used for a preliminary X-ray diffraction analysis of AlN thin films during their growth on the surface of a (100) silicon wafer.

4.
J Phys Chem B ; 109(43): 20093-104, 2005 Nov 03.
Artículo en Inglés | MEDLINE | ID: mdl-16853598

RESUMEN

Nd(3+)-based organic/inorganic hybrids have potential application in the field of integrated optics. Attractive sol-gel derived di-urea and di-urethane cross-linked poly(oxyethylene) (POE)/siloxane hybrids (di-ureasils and di-urethanesils, respectively) doped with neodymium triflate (Nd(CF(3)SO(3))(3)) were examined by Fourier transform mid-infrared (FT-IR), Raman (FT-Raman), (29)Si magic-angle spinning (MAS) nuclear magnetic resonance (NMR) and photoluminescence spectroscopies, and small-angle X-ray scattering (SAXS). The goals of this work were to determine which cation coordinating site of the host matrix (ether oxygen atoms or carbonyl oxygen atoms) is active in each of the materials analyzed, its influence on the nanostructure of the samples and its relation with the photoluminescence properties. The main conclusion derived from this study is that the hydrogen-bonded associations formed throughout the materials play a major role in the hybrids nanostructure and photoluminescence properties.

5.
Phys Rev Lett ; 89(23): 235503, 2002 Dec 02.
Artículo en Inglés | MEDLINE | ID: mdl-12485018

RESUMEN

A nanocomposite consisting of PbTe nanocrystals embedded in a silicate glass was studied by small-angle x-ray scattering during the early stage of isothermal annealing at 793 K. A theoretical function based on a model of spherical PbTe nanocrystals surrounded by a Pb and Te depleted shell fits well to all experimental curves. The time dependences of the nanocrystal radius and size of the depleted shell agree with the prediction of the theory of nucleation and growth by the classical mechanism of atomic diffusion.

6.
J Mol Biol ; 313(5): 1059-72, 2001 Nov 09.
Artículo en Inglés | MEDLINE | ID: mdl-11700062

RESUMEN

ATP-dependent phosphoenolpyruvate carboxykinase (PEPCK) (ATP: oxaloacetate carboxylyase (transphosphorylating), EC 4.1.1.49) is a key enzyme involved in the catabolism of glucose and amino acids in the parasite Trypanosoma cruzi, the causative agent of Chagas' disease. Due to the significant differences in the amino acid sequence and substrate specificity of the human enzyme (PEPCK (GTP-dependent), EC 4.1.1.32), the parasite enzyme has been considered a good target for the development of new anti-chagasic drugs. We have solved the crystal structure of the recombinant PEPCK of T. cruzi up to 2.0 A resolution, characterised the dimeric organisation of the enzyme by solution small angle X-ray scattering (SAXS) and compared the enzyme structure with the known crystal structure of the monomeric PEPCK from Escherichia coli. The dimeric structure possesses 2-fold symmetry, with each monomer sharing a high degree of structural similarity with the monomeric structure of the E. coli PEPCK. Each monomer folds into two complex mixed alpha/beta domains, with the active site located in a deep cleft between the domains. The two active sites in the dimer are far apart from each other, in an arrangement that seems to permit an independent access of the substrates to the two active sites. All residues of the E. coli PEPCK structure that had been found to interact with substrates and metal cofactors have been found conserved and in a substantially equivalent spatial disposition in the T. cruzi PEPCK structure. No substrate or metal ion was present in the crystal structure. A sulphate ion from the crystallisation medium has been found bound to the active site. Solution SAXS data suggest that, in solutions with lower sulphate concentration than that used for the crystallisation experiments, the actual enzyme conformation may be slightly different from its conformation in the crystal structure. This could be due to a conformational transition upon sulphate binding, similar to the ATP-induced transition observed in the E. coli PEPCK, or to crystal packing effects. The present structure of the T. cruzi PEPCK will provide a good basis for the modelling of new anti-chagasic drug leads.


Asunto(s)
Fosfoenolpiruvato Carboxiquinasa (ATP)/química , Trypanosoma cruzi/enzimología , Secuencia de Aminoácidos , Animales , Sitios de Unión , Enfermedad de Chagas/tratamiento farmacológico , Coenzimas/metabolismo , Secuencia Conservada , Cristalización , Dimerización , Diseño de Fármacos , Escherichia coli/enzimología , Modelos Moleculares , Datos de Secuencia Molecular , Fosfoenolpiruvato Carboxiquinasa (ATP)/antagonistas & inhibidores , Estructura Cuaternaria de Proteína , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Alineación de Secuencia , Sulfatos/metabolismo , Difracción de Rayos X
7.
J Synchrotron Radiat ; 5(Pt 3): 1157-61, 1998 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-15263777

RESUMEN

The synchrotron light source designed and constructed at the LNLS is composed of a 1.37 GeV electron storage ring and a 120 MeV linac for low-energy injection. The storage ring has been commissioned and has already reached the designed electron-beam energy, current and emittance. The electron lifetime is now 6 h at 60 mA, and is steadily increasing. Seven beamlines (TGM, SGM, SXS, XAFS, XRD, SAXS, PCr) have been constructed in parallel with the electron accelerators and are at present in operation. Beam time was allocated to 129 approved research projects for the second semester of 1997. A number of them are currently under way.

8.
Eur Biophys J ; 24(2): 77-84, 1995.
Artículo en Inglés | MEDLINE | ID: mdl-8582321

RESUMEN

Small-angle X-ray scattering (SAXS) was used to study structural characteristics of human serum albumin (HSA) in solution under different pH conditions. Guinier analysis of SAXS results yielded values of the molecular radius of gyration ranging from 26.7 A to 34.5 A for pH varying from 2.5 to 7.0. This suggests the existence of significant differences in the overall shape of the molecule at different pH. Molecular models based on subdomains with different spatial configurations were proposed. The distance distribution functions associated with these models were calculated and compared with those determined from the experimental SAXS intensity functions. The conclusion of this SAXS study is that the arrangement of molecular subdomains is clearly pH dependent; the molecule adopting more or less compact configuration for different pH conditions. The conclusions of this systematic study on the modification in molecular shape of HSA as a response to pH changes is consistent with those of previous investigations performed for particular pH conditions.


Asunto(s)
Albúmina Sérica/química , Fenómenos Químicos , Química Física , Humanos , Concentración de Iones de Hidrógeno , Conformación Proteica , Dispersión de Radiación , Soluciones , Rayos X
9.
Biophys J ; 64(2): 560-4, 1993 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-8457680

RESUMEN

The structure of crotapotin, a protein extracted, from the venom of the Crotalus durissus terrificus, in solution at pH = 1.5, was studied by SAXS. The experimental results yield structural parameter values of the molecular radius of gyration Rg = 13.6 A, volume v = 16.2 x 10(3) A3 A3 and maximal dimension Dmax = 46 A. The distance distribution function deduced from the scattering measurements is consistent with an overall molecular shape of an oblate ellipsoid of revolution with asymmetry parameter v = 0.45.


Asunto(s)
Crotoxina/química , Animales , Fenómenos Biofísicos , Biofisica , Concentración de Iones de Hidrógeno , Dispersión de Radiación , Soluciones , Rayos X
10.
Eur Biophys J ; 17(6): 325-9, 1990.
Artículo en Inglés | MEDLINE | ID: mdl-2307140

RESUMEN

alpha-crotamine is a small toxic protein (42 amino acid residues with three disulphide bridges) present in the venom of Crotallus durissus terrificus. Molecular parameters (Rg = 13.7 A, S = 3,000 A2, V = 9,200 A3 and Dmax = 40 A) were derived from SAXS curves obtained from a solution of this protein at pH = 4.5. An excellent agreement between the experimental distance distribution curve and that calculated from a model consisting of two lobes linked by the Cys(18)-Cys(30) disulphide bridge.


Asunto(s)
Venenos de Crotálidos , Secuencia de Aminoácidos , Cromatografía en Gel , Venenos de Crotálidos/aislamiento & purificación , Disulfuros , Datos de Secuencia Molecular , Conformación Proteica , Programas Informáticos , Difracción de Rayos X/métodos
11.
Biophys J ; 47(1): 33-5, 1985 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-3978187

RESUMEN

The radius of gyration of crotamine is determined by the small angle x-ray scattering technique. Several molecular solutions have been studied to correct for concentration effects. The apparent molecular radius of gyration is also determined as a function of pH. An important change between pH 9.5 and 12.5 is attributed to a dominant effect of molecular aggregation.


Asunto(s)
Venenos de Crotálidos , Conformación Proteica , Dispersión de Radiación , Rayos X
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