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Effects of SARS-CoV-2 Alpha, Beta, and Delta variants, age, vaccination, and prior infection on infectiousness of SARS-CoV-2 infections
Suelen H. Qassim; Mohammad R. Hasan; Patrick Tang; Hiam Chemaitelly; Houssein Ayoub; HADI M. YASSINE; Hebah A. Al-Khatib; Maria K. Smatti; Hanan F. Abdul-Rahim; Gheyath Nasrallah; Mohamed Ghaith Al-Kuwari; Abdullatif Al-Khal; Peter Coyle; Imtiaz Gillani; Anvar Hassan Kaleeckal; Riyazuddin Mohammad Shaik; Ali Nizar Latif; Einas Al-Kuwari; Andrew Jeremijenko; Adeel A Butt; Roberto Bertollini; Hamad Eid Al-Romaihi; Mohamed H. Al-Thani; Laith J Abu-Raddad.
Afiliación
  • Suelen H. Qassim; Weill Cornell Medicine-Qatar
  • Mohammad R. Hasan; Sidra Medicine
  • Patrick Tang; Sidra Medicine
  • Hiam Chemaitelly; Weill Cornell Medicine-Qatar
  • Houssein Ayoub; Qatar University
  • HADI M. YASSINE; Qatar University
  • Hebah A. Al-Khatib; Qatar University
  • Maria K. Smatti; Qatar University
  • Hanan F. Abdul-Rahim; Qatar University
  • Gheyath Nasrallah; Qatar University
  • Mohamed Ghaith Al-Kuwari; Primary Health Care Corporation
  • Abdullatif Al-Khal; Hamad Medical Corporation
  • Peter Coyle; Hamad Medical Corporation
  • Imtiaz Gillani; Hamad Medical Corporation
  • Anvar Hassan Kaleeckal; Hamad Medical Corporation
  • Riyazuddin Mohammad Shaik; Hamad Medical Corporation
  • Ali Nizar Latif; Hamad Medical Corporation
  • Einas Al-Kuwari; Hamad Medical Corporation
  • Andrew Jeremijenko; Hamad Medical Corporation
  • Adeel A Butt; Hamad Medical Corporation
  • Roberto Bertollini; Ministry of Public Health
  • Hamad Eid Al-Romaihi; Ministry of Public Health
  • Mohamed H. Al-Thani; Ministry of Public Health
  • Laith J Abu-Raddad; Weill Cornell Medicine-Qatar
Preprint en En | PREPRINT-MEDRXIV | ID: ppmedrxiv-22277257
ABSTRACT
In 2021, Qatar experienced considerable incidence of SARS-CoV-2 infection that was dominated sequentially by the Alpha, Beta, and Delta variants. Using the cycle threshold (Ct) value of an RT-qPCR-positive test to proxy the inverse of infectiousness, we investigated infectiousness of SARS-CoV-2 infections by variant, age, sex, vaccination status, prior infection status, and reason for testing in a random sample of 18,355 RT-qPCR-genotyped infections. Regression analyses were conducted to estimate associations with the Ct value of RT-qPCR-positive tests. Compared to Beta infections, Alpha and Delta infections demonstrated 2.56 higher Ct cycles (95% CI 2.35-2.78), and 4.92 fewer cycles (95% CI 4.67-5.16), respectively. The Ct value declined gradually with age and was especially high for children <10 years of age, signifying lower infectiousness of small children. Children <10 years of age had 2.18 higher Ct cycles (95% CI 1.88-2.48) than those 10-19 years of age. Compared to unvaccinated individuals, the Ct value was higher among individuals who had received one or two vaccine doses, but the Ct value decreased gradually with time since the second-dose vaccination. Ct value was 2.07 cycles higher (95% CI 1.42-2.72) for those with a prior infection than those without prior infection. The Ct value was lowest among individuals tested because of symptoms and was highest among individuals tested as a travel requirement. Delta was substantially more infectious than Beta. Prior immunity, whether due to vaccination or prior infection, is associated with lower infectiousness of breakthrough infections, but infectiousness increases gradually with time since the second-dose vaccination.
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Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Experimental_studies / Observational_studies / Rct Idioma: En Año: 2022 Tipo del documento: Preprint
Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Experimental_studies / Observational_studies / Rct Idioma: En Año: 2022 Tipo del documento: Preprint