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De novo emergence of a remdesivir resistance mutation during treatment of persistent SARS-CoV-2 infection in an immunocompromised patient: A case report
Shiv Gandhi; Jonathan Klein; Alexander Robertson; Mario A. Pena-Hernandez; Michelle J Lin; Pavitra Roychoudhury; Peiwen Lu; John Fournier; David Ferguson; Shah A. Mohamed Bakhash; M. Catherine Muenker; Ariktha Srivathsan; Elsio A. Wunder Jr.; Nicholas Kerantzas; Wenshuai Wang; Brett Lindenbach; Anna Pyle; Craig B. Wilen; Onyema Ogbuagu; Alexander L. Greninger; Akiko Iwasaki; Wade L. Schulz; Albert I. Ko.
Afiliación
  • Shiv Gandhi; Yale University School of Medicine
  • Jonathan Klein; Yale University School of Medicine
  • Alexander Robertson; Yale School of Public Health
  • Mario A. Pena-Hernandez; Yale University School of Medicine
  • Michelle J Lin; University of Washington School of Medicine
  • Pavitra Roychoudhury; University of Washington School of Medicine
  • Peiwen Lu; Yale University School of Medicine
  • John Fournier; Yale University School of Medicine
  • David Ferguson; Yale New Haven Hospital
  • Shah A. Mohamed Bakhash; University of Washington School of Medicine
  • M. Catherine Muenker; Yale School of Public Health
  • Ariktha Srivathsan; Yale School of Public Health
  • Elsio A. Wunder Jr.; Yale School of Public Health
  • Nicholas Kerantzas; Yale University School of Medicine
  • Wenshuai Wang; Yale University
  • Brett Lindenbach; Yale University School of Medicine
  • Anna Pyle; Yale University
  • Craig B. Wilen; Yale University School of Medicine
  • Onyema Ogbuagu; Yale University School of Medicine
  • Alexander L. Greninger; University of Washington School of Medicine
  • Akiko Iwasaki; Yale University School of Medicine
  • Wade L. Schulz; Yale University School of Medicine
  • Albert I. Ko; Yale School of Public Health
Preprint en En | PREPRINT-MEDRXIV | ID: ppmedrxiv-21266069
ABSTRACT
SARS-CoV-2 remdesivir resistance mutations have been generated in vitro but have not been reported in patients receiving treatment with the antiviral agent. We present a case of an immunocompromised patient with acquired B-cell deficiency who developed an indolent, protracted course of SARS-CoV-2 infection. Remdesivir therapy alleviated symptoms and produced a transient virologic response, but her course was complicated by recrudescence of high-grade viral shedding. Whole genome sequencing identified a mutation, E802D, in the nsp12 RNA-dependent RNA polymerase, which was not present in pre-treatment specimens. In vitro experiments demonstrated that the mutation conferred a [~]6-fold increase in remdesivir IC50 but resulted in a fitness cost in the absence of remdesivir. Sustained clinical and virologic response was achieved after treatment with casirivimab-imdevimab. Although the fitness cost observed in vitro may limit the risk posed by E802D, this case illustrates the importance of monitoring for remdesivir resistance and the potential benefit of combinatorial therapies in immunocompromised patients with SARS-CoV-2 infection.
Licencia
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Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Case_reports / Prognostic_studies Idioma: En Año: 2021 Tipo del documento: Preprint
Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Case_reports / Prognostic_studies Idioma: En Año: 2021 Tipo del documento: Preprint