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City-level SARS-CoV-2 sewage surveillance
Karin Yaniv; Marilou Shagan; Esti Kramarsky-Winter; Victoria Indenbaum; Merav Weil; Michal Elul; Oran Erster; Alin Sela Brown; Ella Mendelson; Batya Mannasse; Rachel Shirazi; Satish Lakkakula; Oren Miron; Ehud Rinott; Ricardo Gilead Baibich; Iris Bigler; Matan Malul; Rotem Rishti; Asher Brenner; Yair E. Lewis; Eran Friedler; Yael Gilboa; Sara Sabach; Yuval Alfiya; Uta Cheruti; Nadav Davidovitch; Natalya Bilenko; Jacob Moran-Gilad; Yakir Berchenko; Itay Bar-Or; Ariel Kushmaro.
Afiliación
  • Karin Yaniv; Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben Gurion University, Beer Sheva, 84105, Israel.
  • Marilou Shagan; Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben Gurion University, Beer Sheva, 84105, Israel.
  • Esti Kramarsky-Winter; Avram and Stella Goldstein-Goren, Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
  • Victoria Indenbaum; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Merav Weil; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Michal Elul; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Oran Erster; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Alin Sela Brown; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Ella Mendelson; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Batya Mannasse; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Rachel Shirazi; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Satish Lakkakula; Avram and Stella Goldstein-Goren, Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
  • Oren Miron; Department of Health Systems Management, School of Public Health, Faculty of Health Science, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Ehud Rinott; Department of Health Systems Management, School of Public Health, Faculty of Health Science, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Ricardo Gilead Baibich; KANDO, Environment Services Ltd, Tsor St 8, Kokhav Ya'ir Tzur Yigal, Israel.
  • Iris Bigler; KANDO, Environment Services Ltd, Tsor St 8, Kokhav Ya'ir Tzur Yigal, Israel.
  • Matan Malul; KANDO, Environment Services Ltd, Tsor St 8, Kokhav Ya'ir Tzur Yigal, Israel.
  • Rotem Rishti; KANDO, Environment Services Ltd, Tsor St 8, Kokhav Ya'ir Tzur Yigal, Israel
  • Asher Brenner; Unit of Environmental Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Yair E. Lewis; Faculty of Medicine, Technion-Israel Institute of Technology, Israel
  • Eran Friedler; Faculty of Civ. and Env. Eng., Technion-Israel Inst. of Technology; Haifa 32000, Israel
  • Yael Gilboa; Faculty of Civ. and Env. Eng., Technion-Israel Inst. of Technology; Haifa 32000, Israel
  • Sara Sabach; Faculty of Civ. and Env. Eng., Technion-Israel Inst. of Technology; Haifa 32000, Israel
  • Yuval Alfiya; Faculty of Civ. and Env. Eng., Technion-Israel Inst. of Technology; Haifa 32000, Israel
  • Uta Cheruti; Faculty of Civ. and Env. Eng., Technion-Israel Inst. of Technology; Haifa 32000, Israel
  • Nadav Davidovitch; Department of Health Systems Management, School of Public Health, Faculty of Health Science, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Natalya Bilenko; Department of Health Systems Management, School of Public Health, Faculty of Health Science, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Jacob Moran-Gilad; Department of Health Systems Management, School of Public Health, Faculty of Health Science, Ben-Gurion University of the Negev, Beer-Sheva, Israel
  • Yakir Berchenko; Department of Industrial Engineering and Management, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel
  • Itay Bar-Or; Central Virology Lab, Ministry of Health, Sheba Medical Center, Israel
  • Ariel Kushmaro; Avram and Stella Goldstein-Goren, Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Preprint en En | PREPRINT-MEDRXIV | ID: ppmedrxiv-20215244
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ABSTRACT
The COVID-19 pandemic created a global crisis impacting not only healthcare systems, but also world economies and society. Recent data have indicated that fecal shedding of SARS-CoV-2 is common, and that viral RNA can be detected in wastewater. This suggests that wastewater monitoring is a potentially efficient tool for both epidemiological surveillance, and early warning for SARS-CoV-2 circulation at the population level. In this study we sampled an urban wastewater infrastructure in the city of Ashkelon, Israel, during the end of the first COVID-19 wave in May 2020 when the number of infections seemed to be waning. We were able to show varying presence of SARS-CoV-2 RNA in wastewater from several locations in the city during two sampling periods. This was expressed as a new index, Normalized Viral Load (NVL), which can be used in different area scales to define levels of virus activity such as red (high) or green (no), and to follow morbidity in the population at tested area. Our index showed the rise in viral load between the two sampling periods (one week apart) and indicated an increase in morbidity that was evident a month later in the population. Thus, this methodology may provide an early indication for SARS-CoV-2 infection outbreak in a population before an outbreak is clinically apparent. HIGHLIGHTSO_LIDetecting the presence of SARS-CoV-2 virus RNA in urban wastewater C_LIO_LIThe city sewer system may provide an early indication for SARS-CoV-2 infection and may be used as early warning for SARS-CoV-2 outbreaks C_LIO_LINVL index defines various infected urban zones from red (high) to green (low) C_LI Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=128 SRC="FIGDIR/small/20215244v1_ufig1.gif" ALT="Figure 1"> View larger version (54K) org.highwire.dtl.DTLVardef@360a84org.highwire.dtl.DTLVardef@1ec8004org.highwire.dtl.DTLVardef@1c8ae93org.highwire.dtl.DTLVardef@3d670c_HPS_FORMAT_FIGEXP M_FIG C_FIG
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Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Prognostic_studies Idioma: En Año: 2020 Tipo del documento: Preprint
Texto completo: 1 Colección: 09-preprints Base de datos: PREPRINT-MEDRXIV Tipo de estudio: Prognostic_studies Idioma: En Año: 2020 Tipo del documento: Preprint