Sequencing of historic samples provides complete coding sequences of chicken calicivirus from the United States.

Goraichuk, Iryna V; Davis, James F; Afonso, Claudio L; Suarez, David L

Goraichuk, Iryna V; Davis, James F; Afonso, Claudio L; Suarez, David L.

Afiliación

Goraichuk IV; Exotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, ARS, USDA, Athens, Georgia, USA.
Davis JF; Georgia Poultry Laboratory Network, Gainesville, Georgia, USA.
Afonso CL; Exotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, ARS, USDA, Athens, Georgia, USA.
Suarez DL; Exotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, ARS, USDA, Athens, Georgia, USA.

Microbiol Resour Announc ; 13(10): e0077724, 2024 Oct 10.

Article en En | MEDLINE | ID: mdl-39264163

ABSTRACT

ABSTRACT

Here, we report the coding-complete genomic sequences of two chicken caliciviruses from US poultry flocks in 2003 and 2004. They show the same genomic organization as that of other members of the Bavovirus genus and have the highest nucleotide identity (~88%) with strains from clinically normal chickens from Germany in 2004 and Netherlands in 2019.

Palabras clave

Bavovirus; Illumina; NGS; Nextera; RNA virus; WGS; calicivirus; next-generation sequencing; poultry; whole-genome sequencing

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Microbiol Resour Announc Año: 2024 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Estados Unidos

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