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Watching a Single Enzyme at Work Using Single-Molecule Surface-Enhanced Raman Scattering and DNA Origami-Based Plasmonic Antennas.
Kanehira, Yuya; Kogikoski, Sergio; Titov, Evgenii; Tapio, Kosti; Mostafa, Amr; Bald, Ilko.
Afiliación
  • Kanehira Y; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
  • Kogikoski S; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
  • Titov E; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
  • Tapio K; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
  • Mostafa A; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
  • Bald I; Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.
ACS Nano ; 2024 Jul 29.
Article en En | MEDLINE | ID: mdl-39074854
ABSTRACT
The detection of a single-enzyme catalytic reaction by surfaced-enhanced Raman scattering (SERS) is presented by utilizing DNA origami-based plasmonic antennas. A single horseradish peroxidase (HRP) was accommodated on a DNA origami nanofork plasmonic antenna (DONA) containing gold nanoparticles, enabling the tracing of single-molecule SERS signals during the peroxide reduction reaction. This allows monitoring of the structure of a single enzymatic catalytic center and products under suitable liquid conditions. Herein, we demonstrate the chemical changes of HRP and the appearance of tetramethylbenzidine (TMB), which works as a hydrogen donor before and after the catalytic reaction. The results show that the iron in HRP adopts Fe4+ and low spin states with the introduction of H2O2, indicating compound-I formation. Density functional theory (DFT) calculations were performed for later catalytic steps to rationalize the experimental Raman/SERS spectra. The presented data provide several possibilities for tracking single biomolecules in situ during a chemical reaction and further developing plasmon-enhanced biocatalysis.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: ACS Nano Año: 2024 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: ACS Nano Año: 2024 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Estados Unidos