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A Closer Look at Type I Left-Handed ß-Helices Provides a Better Understanding in Their Sequence-Structure Relationship: Toward Their Rational Design.
Naudé, Maxime; Faller, Peter; Lebrun, Vincent.
Afiliación
  • Naudé M; Institute of Chemistry of Strasbourg (UMR 7177), University of Strasbourg-CNRS, Strasbourg, France.
  • Faller P; Institute of Chemistry of Strasbourg (UMR 7177), University of Strasbourg-CNRS, Strasbourg, France.
  • Lebrun V; Institute of Chemistry of Strasbourg (UMR 7177), University of Strasbourg-CNRS, Strasbourg, France.
Proteins ; 92(11): 1318-1328, 2024 Nov.
Article en En | MEDLINE | ID: mdl-38980225
ABSTRACT
Understanding the sequence-structure relationship in protein is of fundamental interest, but has practical applications such as the rational design of peptides and proteins. This relationship in the Type I left-handed ß-helix containing proteins is updated and revisited in this study. Analyzing the available experimental structures in the Protein Data Bank, we could describe, further in detail, the structural features that are important for the stability of this fold, as well as its nucleation and termination. This study is meant to complete previous work, as it provides a separate analysis of the N-terminal and C-terminal rungs of the helix. Particular sequence motifs of these rungs are described along with the structural element they form.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Proteínas / Modelos Moleculares / Secuencia de Aminoácidos / Bases de Datos de Proteínas Idioma: En Revista: Proteins Asunto de la revista: BIOQUIMICA Año: 2024 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Proteínas / Modelos Moleculares / Secuencia de Aminoácidos / Bases de Datos de Proteínas Idioma: En Revista: Proteins Asunto de la revista: BIOQUIMICA Año: 2024 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Estados Unidos