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A web application for gene-based queries of CaeNDR RNA-seq data.
Bell, Avery Davis; Paaby, Annalise B.
Afiliación
  • Bell AD; School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, United States.
  • Paaby AB; School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, United States.
MicroPubl Biol ; 20242024.
Article en En | MEDLINE | ID: mdl-38911436
ABSTRACT
Variation in gene expression is a feature of all living systems and has recently been characterized extensively among wild strains of the model organism Caenorhabditis elegans. To enable researchers to query gene expression and gene expression variation at any gene of interest, we have created a user-friendly web application that shares RNA-seq transcription data for 208 wild C. elegans strains generated by the Caenorhabditis Natural Diversity Resource (CaeNDR). Here, we describe the features of the web application and the details of the data and data processing underlying it. We hope that this website, wildworm.biosci.gatech.edu/cendrexp/ , will help C. elegans researchers better understand their favorite genes and strains.

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: MicroPubl Biol Año: 2024 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: MicroPubl Biol Año: 2024 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Estados Unidos