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Sequencing and description of the genome of a strain of Stenotrophomonas geniculata isolated from a patient infected with COVID-19 at Hospital Regional No.1 de Charo, Michoacán, México.
Flores-Alvarez, Luis Jose; Martínez-Flores, Irma; Bustos, Patricia; Gómez-García, Anel; Gutiérrez-Castellanos, Sergio; Poot-Hernández, Augusto César; Arredondo-Santoyo, Marina.
Afiliación
  • Flores-Alvarez LJ; Centro de Investigación Biomédica de Michoacán-IMSS. Morelia, Michoacán, México, Mexican Social Security Institute, Mexico City, Mexico City, Mexico.
  • Martínez-Flores I; Centro de Ciencias Genomicas, UNAM. Cuernavaca, Morelos, Universidad Nacional Autónoma de México, Mexico City, Mexico City, Mexico.
  • Bustos P; Centro de Ciencias Genomicas, UNAM. Cuernavaca, Morelos, Universidad Nacional Autónoma de México, Mexico City, Mexico City, Mexico.
  • Gómez-García A; Centro de Investigación Biomédica de Michoacán-IMSS. Morelia, Michoacán, México, Mexican Social Security Institute, Mexico City, Mexico City, Mexico.
  • Gutiérrez-Castellanos S; Centro de Investigación Biomédica de Michoacán-IMSS. Morelia, Michoacán, México. , Mexican Social Security Institute, Mexico City, Mexico City, Mexico.
  • Poot-Hernández AC; Instituto de Fisiología Celular, UNAM. Cd de México, Universidad Nacional Autónoma de México, Mexico City, Mexico City, Mexico.
  • Arredondo-Santoyo M; Centro de Investigación Biomédica de Michoacán-IMSS. Morelia, Michoacán, México, Mexican Social Security Institute, Mexico City, Mexico City, Mexico.
MicroPubl Biol ; 20242024.
Article en En | MEDLINE | ID: mdl-38415072
ABSTRACT
Stenotrophomonas is a bacterial genus that can be found in various environments, such as water, soil, and clinical samples. Due to their high genetic and phenotypic diversity, it is difficult to properly identify and classify all isolates. The COVID-19 pandemic caused an increase in nosocomial infections, which played a major role in the high mortality rate among patients in intensive care. This is the first report of the identification of S. geniculata as a nosocomial opportunistic pathogen isolated from a patient with COVID-19. Their genome was isolated, sequenced, and assembled, and it consists of 4,488,090 bp in 24 contigs, 4,103 coding sequences, and a G+C content of 66.58%.

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE País/Región como asunto: Mexico Idioma: En Revista: MicroPubl Biol Año: 2024 Tipo del documento: Article País de afiliación: México Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE País/Región como asunto: Mexico Idioma: En Revista: MicroPubl Biol Año: 2024 Tipo del documento: Article País de afiliación: México Pais de publicación: Estados Unidos