Community characterization of soil from the Central Deccan Plateau dry tropical deciduous forest (Ceddtrof) in central India using 16S rRNA gene amplicon sequencing.

Rekadwad, Bhagwan Narayan; Shouche, Yogesh S; Jangid, Kamlesh

Rekadwad, Bhagwan Narayan; Shouche, Yogesh S; Jangid, Kamlesh.

Afiliación

Rekadwad BN; National Centre for Microbial Resource, DBT-National Centre for Cell Science, SP Pune University Campus, Pune, Maharashtra, India.
Shouche YS; Microbe AI Lab, Division of Microbiology and Biotechnology, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, Karnataka, India.
Jangid K; National Centre for Microbial Resource, DBT-National Centre for Cell Science, SP Pune University Campus, Pune, Maharashtra, India.

Microbiol Resour Announc ; 13(2): e0113423, 2024 Feb 15.

Article en En | MEDLINE | ID: mdl-38270452

ABSTRACT

ABSTRACT

We report a preliminary study of soil from the Central Deccan Plateau dry tropical deciduous forest in India using 16S rRNA gene amplicon sequencing. We report diverse taxa, e.g., Proteobacteria, Actinobacteria, Acidobacteria, Plactomycetes, Chloroflexi, Bacteroidetes, Verrucomicrobia, Gemmatimonadetes, Firmicutes, Crenarchaeota, Nitrospirae, Armatimonadetes, Elusimicrobia, Cyanobacteria, Chlamydiae, Chlorobi, Parvachaeota, Tenericutes, Euryarchaeota, Fibrobacteres, Calditrix, and Spirochaetes.

Palabras clave

16S rRNA gene sequencing; Acidobacteria; Chloroflexi; MTP microbiome pipeline; evolutionary microbiology; forest soil microbiome; host-microbe interaction; microbial dark matter; next-generation sequencing; planctomycetes

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Microbiol Resour Announc Año: 2024 Tipo del documento: Article País de afiliación: India Pais de publicación: Estados Unidos

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