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Transcriptome profiles of Streptomyces clavuligerus strains producing different titers of clavulanic acid.
Gong, Junpyo; Yi, Jeong Sang; Cho, Hang Su; Shin, Chang Hun; Won, Hyung-Jin; Cho, Byung-Kwan; Noh, Minsoo; Yoon, Yeo Joon.
Afiliación
  • Gong J; Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
  • Yi JS; Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
  • Cho HS; Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
  • Shin CH; Research Institute of CKD BiO, Ansan, 15604, Republic of Korea.
  • Won HJ; Research Institute of CKD BiO, Ansan, 15604, Republic of Korea.
  • Cho BK; Department of Biological Sciences and KI for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon, 34141, Republic of Korea.
  • Noh M; Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea. minsoonoh@snu.ac.kr.
  • Yoon YJ; Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea. yeojoonyoon@snu.ac.kr.
Sci Data ; 10(1): 804, 2023 11 16.
Article en En | MEDLINE | ID: mdl-37973966
Streptomyces clavuligerus NRRL 3585 is a native producer of clavulanic acid (CA), a clinically used ß-lactamase inhibitor, and is widely used as an industrial strain for the production of antibiotics. Selective random mutagenesis has successfully generated the improved CA-producing S. clavuligerus mutant strains as well as the strain with the loss of CA biosynthesis. To understand the molecular mechanisms associated with the improved CA-production potential, genome-scale RNA-sequencing-based transcriptional data were obtained for the wild-type S. clavuligerus strain and its three mutant strains. Total RNA samples for each strain were collected across four different growth stages, and all 32 sequencing data points exhibited an average Phred score of 36. The high-quality genome-scale transcriptional profile of S. clavuligerus strains with varied CA biosynthetic potential provides valuable insights and new opportunities for discovering efficient metabolic engineering strategies for the development of improved industrial strains.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Transcriptoma / Antibacterianos Idioma: En Revista: Sci Data Año: 2023 Tipo del documento: Article Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Transcriptoma / Antibacterianos Idioma: En Revista: Sci Data Año: 2023 Tipo del documento: Article Pais de publicación: Reino Unido