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Spatial transcriptomics reveals light-induced chlorenchyma cells involved in promoting shoot regeneration in tomato callus.
Song, Xiehai; Guo, Pengru; Xia, Keke; Wang, Meiling; Liu, Yongqi; Chen, Lichuan; Zhang, Jinhui; Xu, Mengyuan; Liu, Naixu; Yue, Zhiliang; Xu, Xun; Gu, Ying; Li, Gang; Liu, Min; Fang, Liang; Deng, Xing Wang; Li, Bosheng.
Afiliación
  • Song X; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Guo P; Beijing Genomics Institute Research, Beijing 102601, China.
  • Xia K; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Wang M; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Liu Y; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Chen L; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Zhang J; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Xu M; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Liu N; Beijing Genomics Institute Research, Beijing 102601, China.
  • Yue Z; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Xu X; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Gu Y; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, Shandong 261325, China.
  • Li G; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Liu M; Beijing Genomics Institute Research, Shenzhen 518083, China.
  • Fang L; State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong 271018, China.
  • Deng XW; Baimaike Intelligent Manufacturing, Qingdao, Shandong 266500, China.
  • Li B; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong 518005, China.
Proc Natl Acad Sci U S A ; 120(38): e2310163120, 2023 09 19.
Article en En | MEDLINE | ID: mdl-37703282
Callus is a reprogrammed cell mass involved in plant regeneration and gene transformation in crop engineering. Pluripotent callus cells develop into fertile shoots through shoot regeneration. The molecular basis of the shoot regeneration process in crop callus remains largely elusive. This study pioneers the exploration of the spatial transcriptome of tomato callus during shoot regeneration. The findings reveal the presence of highly heterogeneous cell populations within the callus, including epidermis, vascular tissue, shoot primordia, inner callus, and outgrowth shoots. By characterizing the spatially resolved molecular features of shoot primordia and surrounding cells, specific factors essential for shoot primordia formation are identified. Notably, chlorenchyma cells, enriched in photosynthesis-related processes, play a crucial role in promoting shoot primordia formation and subsequent shoot regeneration. Light is shown to promote shoot regeneration by inducing chlorenchyma cell development and coordinating sugar signaling. These findings significantly advance our understanding of the cellular and molecular aspects of shoot regeneration in tomato callus and demonstrate the immense potential of spatial transcriptomics in plant biology.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Solanum lycopersicum Tipo de estudio: Prognostic_studies Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2023 Tipo del documento: Article País de afiliación: China Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Solanum lycopersicum Tipo de estudio: Prognostic_studies Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2023 Tipo del documento: Article País de afiliación: China Pais de publicación: Estados Unidos