Gene regulation network inference using k-nearest neighbor-based mutual information estimation: revisiting an old DREAM.

Shachaf, Lior I; Roberts, Elijah; Cahan, Patrick; Xiao, Jie

Shachaf, Lior I; Roberts, Elijah; Cahan, Patrick; Xiao, Jie.

Afiliación

Shachaf LI; Department of Biophysics, Johns Hopkins University, 3400 N. Charles Street, Baltimore, MD, 21218, USA. lshacha1@jhu.edu.
Roberts E; Department of Biophysics, Johns Hopkins University, 3400 N. Charles Street, Baltimore, MD, 21218, USA.
Cahan P; 10x Genomics, 6230 Stoneridge Mall Road, Pleasanton, CA, 94588-3260, USA.
Xiao J; Department of Biomedical Engineering, Department of Molecular Biology and Genetics, Institute for Cell Engineering, Johns Hopkins School of Medicine, 733 N. Broadway, Baltimore, MD, 21205, USA.

BMC Bioinformatics ; 24(1): 84, 2023 Mar 06.

Article en En | MEDLINE | ID: mdl-36879188

Asunto(s)

Algoritmos; Redes Reguladoras de Genes; Análisis por Conglomerados

Palabras clave

Gene regulatory network inference; Mutual information; k-nearest neighbor

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Algoritmos / Redes Reguladoras de Genes Idioma: En Revista: BMC Bioinformatics Asunto de la revista: INFORMATICA MEDICA Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Reino Unido

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