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Non-covalent interactions reveal the protein chain δ conformation in a flexible single-residue model.
Imani, Zeynab; Mundlapati, Venkateswara Rao; Brenner, Valérie; Gloaguen, Eric; Le Barbu-Debus, Katia; Zehnacker-Rentien, Anne; Robin, Sylvie; Aitken, David J; Mons, Michel.
Afiliación
  • Imani Z; Université Paris-Saclay, CNRS, ICMMO, Orsay 91400, France.
  • Mundlapati VR; Université Paris-Saclay, CEA, CNRS, LIDYL, Gif-sur-Yvette 91191, France.
  • Brenner V; Université Paris-Saclay, CEA, CNRS, LIDYL, Gif-sur-Yvette 91191, France.
  • Gloaguen E; Université Paris-Saclay, CEA, CNRS, LIDYL, Gif-sur-Yvette 91191, France.
  • Le Barbu-Debus K; Université Paris-Saclay, CNRS, ISMO, Orsay 91400, France.
  • Zehnacker-Rentien A; Université Paris-Saclay, CNRS, ISMO, Orsay 91400, France.
  • Robin S; Université Paris-Saclay, CNRS, ICMMO, Orsay 91400, France.
  • Aitken DJ; Université de Paris, Faculté de Pharmacie, Paris 75006, France.
  • Mons M; Université Paris-Saclay, CNRS, ICMMO, Orsay 91400, France.
Chem Commun (Camb) ; 59(9): 1161-1164, 2023 Jan 26.
Article en En | MEDLINE | ID: mdl-36625351
The δ conformation is a local secondary structure in proteins that implicates a πamide N-H⋯N interaction between a backbone N atom and the NH of the following residue. Small-molecule models thereof have been limited so far to rigid proline-type compounds. We show here that in derivatives of a cyclic amino acid with a sulphur atom in the γ-position, specific side-chain/backbone N-H⋯S interactions stabilize the δ conformation sufficiently to allow it to compete with classical C5 and C7 H-bonded conformers.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Proteínas / Amidas Idioma: En Revista: Chem Commun (Camb) Asunto de la revista: QUIMICA Año: 2023 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Proteínas / Amidas Idioma: En Revista: Chem Commun (Camb) Asunto de la revista: QUIMICA Año: 2023 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Reino Unido