Your browser doesn't support javascript.
loading
Methylation Analyses Reveal Promoter Hypermethylation as a Rare Cause of "Second Hit" in Germline BRCA1-Associated Pancreatic Ductal Adenocarcinoma.
Zheng-Lin, Binbin; Rainone, Michael; Varghese, Anna M; Yu, Kenneth H; Park, Wungki; Berger, Michael; Mehine, Miika; Chou, Joanne; Capanu, Marinela; Mandelker, Diana; Stadler, Zsofia K; Birsoy, Ozge; Jairam, Sowmya; Yang, Ciyu; Li, Yirong; Wong, Donna; Benhamida, Jamal K; Ladanyi, Marc; Zhang, Liying; O'Reilly, Eileen M.
Afiliación
  • Zheng-Lin B; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Rainone M; Department of Medical Oncology, City of Hope National Medical Center, Duarte, CA, USA.
  • Varghese AM; Gastrointestinal Oncology Service, Division of Solid Tumor Oncology, Department of Medicine, Memorial Sloan Kettering Cancer Center, 300 East 66th Street, Office 1021, New York, NY, 10065, USA.
  • Yu KH; Gastrointestinal Oncology Service, Division of Solid Tumor Oncology, Department of Medicine, Memorial Sloan Kettering Cancer Center, 300 East 66th Street, Office 1021, New York, NY, 10065, USA.
  • Park W; Gastrointestinal Oncology Service, Division of Solid Tumor Oncology, Department of Medicine, Memorial Sloan Kettering Cancer Center, 300 East 66th Street, Office 1021, New York, NY, 10065, USA.
  • Berger M; Weill Cornell Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
  • Mehine M; David M. Rubenstein Center for Pancreatic Research, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Chou J; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Capanu M; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Mandelker D; Department of Epidemiology and Biostatistics, Weill Cornell Medical College, New York, NY, USA.
  • Stadler ZK; Department of Epidemiology and Biostatistics, Weill Cornell Medical College, New York, NY, USA.
  • Birsoy O; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Jairam S; Gastrointestinal Oncology Service, Division of Solid Tumor Oncology, Department of Medicine, Memorial Sloan Kettering Cancer Center, 300 East 66th Street, Office 1021, New York, NY, 10065, USA.
  • Yang C; Weill Cornell Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
  • Li Y; David M. Rubenstein Center for Pancreatic Research, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Wong D; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Benhamida JK; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Ladanyi M; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • Zhang L; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
  • O'Reilly EM; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Mol Diagn Ther ; 26(6): 645-653, 2022 11.
Article en En | MEDLINE | ID: mdl-36178671
BACKGROUND AND OBJECTIVE: Pancreatic ductal adenocarcinoma (PDAC) is characterized by the occurrence of pathogenic variants in BRCA1/2 in 5-6% of patients. Biallelic loss of BRCA1/2 enriches for response to platinum agents and poly (ADP-ribose) polymerase 1 inhibitors. There is a dearth of evidence on the mechanism of inactivation of the wild-type BRCA1 allele in PDAC tumors with a germline BRCA1 (gBRCA1) pathogenic or likely pathogenic variant (P/LPV). Herein, we examine promotor hypermethylation as a "second hit" mechanism in patients with gBRCA1-PDAC. METHODS: We evaluated patients with PDAC who underwent Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT) somatic and germline testing from an institutional database. DNA isolated from tumor tissue and matched normal peripheral blood were sequenced by MSK-IMPACT. In patients with gBRCA1-PDAC, we examined the somatic BRCA1 mutation status and promotor methylation status of the tumor BRCA1 allele via a methylation array analysis. In patients with sufficient remaining DNA, a second methylation analysis by pyrosequencing was performed. RESULTS: Of 1012 patients with PDAC, 19 (1.9%) were identified to harbor a gBRCA1 P/LPV. Fifteen patients underwent a methylation array and the mean percentage of BRCA1 promotor methylation was 3.62%. In seven patients in whom sufficient DNA was available, subsequent pyrosequencing confirmed an unmethylated BRCA1 promotor. Loss of heterozygosity was detected in 12 of 19 (63%, 95% confidence interval 38-84) patients, demonstrating loss of heterozygosity is the major molecular mechanism of BRCA1 inactivation in PDAC. Two (10.5%) cases had a somatic BRCA1 mutation. CONCLUSIONS: In patients with gBRCA1-P/LPV-PDAC, loss of heterozygosity is the main inactivating mechanism of the wild-type BRCA1 allele in the tumor, and methylation of the BRCA1 promoter is a distinctly uncommon occurrence.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Neoplasias Pancreáticas / Proteína BRCA1 / Carcinoma Ductal Pancreático Tipo de estudio: Risk_factors_studies Límite: Humans Idioma: En Revista: Mol Diagn Ther Asunto de la revista: BIOLOGIA MOLECULAR / FARMACOLOGIA / TECNICAS E PROCEDIMENTOS DE LABORATORIO Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Nueva Zelanda

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Neoplasias Pancreáticas / Proteína BRCA1 / Carcinoma Ductal Pancreático Tipo de estudio: Risk_factors_studies Límite: Humans Idioma: En Revista: Mol Diagn Ther Asunto de la revista: BIOLOGIA MOLECULAR / FARMACOLOGIA / TECNICAS E PROCEDIMENTOS DE LABORATORIO Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Nueva Zelanda