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On the flexibility of the cellular amination network in E coli.
Schulz-Mirbach, Helena; Müller, Alexandra; Wu, Tong; Pfister, Pascal; Aslan, Selçuk; Schada von Borzyskowski, Lennart; Erb, Tobias J; Bar-Even, Arren; Lindner, Steffen N.
Afiliación
  • Schulz-Mirbach H; Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
  • Müller A; Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
  • Wu T; Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
  • Pfister P; Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
  • Aslan S; Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
  • Schada von Borzyskowski L; Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
  • Erb TJ; Institute of Biology Leiden, Leiden University, Leiden, Netherlands.
  • Bar-Even A; Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
  • Lindner SN; Center for Synthetic Microbiology (SYNMIKRO), Marburg, Germany.
Elife ; 112022 07 25.
Article en En | MEDLINE | ID: mdl-35876664
Nitrogen is an essential part of many of the cell's building blocks, including amino acids and nucleotides, which form proteins and DNA respectively. Therefore, nitrogen has to be available to cells so that they can survive and grow. In nature, some microorganisms convert the gaseous form of nitrogen into ammonium, which then acts as the nitrogen source of most organisms, including bacteria, plants and animals. Once cells take up ammonium, it is 'fixed' by becoming part of an amino acid called glutamate, which has a so-called 'amine group' that contains a nitrogen. Glutamate then becomes the central source for passing these amines on to other molecules, distributing nitrogen throughout the cell. This coupling between ammonium fixation and glutamate production evolved over millions of years and occurs in all organisms. However, the complete metabolic network that underlies the distribution of amines remains poorly understood despite decades of research. Furthermore, it is not clear whether ammonium can be fixed in a way that is independent of glutamate. To answer these questions, Schulz-Mirbach et al. used genetic engineering to create a strain of the bacterium E. coli that was unable to make glutamate. These mutant cells could only grow in the presence of certain amino acids, which acted as alternative amine sources. Schulz-Mirbach et al. found that enzymes called transaminases, and one called AspC in particular, were required for the cells to be able to produce glutamate using the amine groups from other amino acids. Notably, Schulz-Mirbach et al. showed that AspC, which had previously been shown to use an amino acid called aspartate as a source of amine groups, is indispensable if the cell is to use the amine groups from other amino acids ­ including histidine, tyrosine, phenylalanine, tryptophan, methionine, isoleucine and leucine. Schulz-Mirbach et al. also discovered that if they engineered the E. coli cells to produce transaminases from other species, the repertoire of molecules that the cells could use as the source of amines to generate glutamate increased. In a final set of experiments, Schulz-Mirbach et al. were able to engineer the cells to fix ammonium by producing aspartate and leucine, thus entirely bypassing the deleted routes of glutamate synthesis. These data suggest that fixing ammonium and distributing nitrogen in E. coli can be very flexible. The results from these experiments may shed light on how cells adapt when there is not a lot of ammonium available. Moreover, this study could advance efforts at metabolic engineering, for example, to create molecules through new pathways or to boost the production of amino acids needed for industrial purposes.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Escherichia coli / Compuestos de Amonio Idioma: En Revista: Elife Año: 2022 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Escherichia coli / Compuestos de Amonio Idioma: En Revista: Elife Año: 2022 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Reino Unido