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Complete chloroplast genome sequencing of ten wild Fragaria species in China provides evidence for phylogenetic evolution of Fragaria.
Sun, Jian; Sun, Rui; Liu, Huabo; Chang, Linlin; Li, Shuangtao; Zhao, Mizhen; Shennan, Carol; Lei, Jiajun; Dong, Jing; Zhong, Chuanfei; Xue, Li; Gao, Yongshun; Wang, Guixia; Zhang, Yuntao.
Afiliación
  • Sun J; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Sun R; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Liu H; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Chang L; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Li S; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Zhao M; Institute of Pomology, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China.
  • Shennan C; Environmental Studies, University of California Santa Cruz, 95064 Santa Cruz, CA, USA. Electronic address: cshennan@ucsc.edu.
  • Lei J; Department of Horticulture, Shenyang Agricultural University, 110866 Shenyang, China.
  • Dong J; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Zhong C; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Xue L; Department of Horticulture, Shenyang Agricultural University, 110866 Shenyang, China.
  • Gao Y; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China.
  • Wang G; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China. Electronic address: wgxia1972@163.com.
  • Zhang Y; Beijing Academy of Forestry and Pomology Sciences; Beijing Engineering Research Center for Strawberry; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, 100093 Beijing, China. Electronic address: zhytao1963@126.com.
Genomics ; 113(3): 1170-1179, 2021 05.
Article en En | MEDLINE | ID: mdl-33705887
Complete chloroplast genomes of ten wild Fragaria species native to China were sequenced. Phylogenetic analysis clustered Fragaria species into two clades: The south clade (F. iinumae, F. chinensis, F. pentaphylla, F. nilgerrensis, F. daltoniana, F. corymbosa, F. moupinensis, F. tibetica, F. nipponica, F. gracilis, and F. nubicola and north clade (F. viridis, F. orientalis, F. moschata, F. mandshurica, F. vesca, F. chiloensis, F. virginiana, and F. × ananassa), while F. iinumae is the oldest extant species. Molecular clock analysis suggested present Fragaria species share a common ancestor 3.57 million years ago (Ma), F. moschata and octoploid species evolve 0.89 and 0.97 Ma, respectively, but F. moschata be not directly involved in current octoploid species formation. Drastic global temperature change since the Palaeocene-Eocene, approx. 55 Ma, especially during uplifting of the Qinghai-Tibet plateau and quaternary glaciation may have driven the formation of Fragaria, separation of two groups and polyploidization.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Fragaria / Genoma del Cloroplasto Idioma: En Revista: Genomics Asunto de la revista: GENETICA Año: 2021 Tipo del documento: Article País de afiliación: China Pais de publicación: Estados Unidos
Texto completo
Añadir a Mi BVS
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Fragaria / Genoma del Cloroplasto Idioma: En Revista: Genomics Asunto de la revista: GENETICA Año: 2021 Tipo del documento: Article País de afiliación: China Pais de publicación: Estados Unidos