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Deep learning and computer vision will transform entomology.
Høye, Toke T; Ärje, Johanna; Bjerge, Kim; Hansen, Oskar L P; Iosifidis, Alexandros; Leese, Florian; Mann, Hjalte M R; Meissner, Kristian; Melvad, Claus; Raitoharju, Jenni.
Afiliación
  • Høye TT; Department of Bioscience, Aarhus University, DK-8410 Rønde, Denmark; tth@bios.au.dk.
  • Ärje J; Arctic Research Centre, Aarhus University, DK-8410 Rønde, Denmark.
  • Bjerge K; Department of Bioscience, Aarhus University, DK-8410 Rønde, Denmark.
  • Hansen OLP; Arctic Research Centre, Aarhus University, DK-8410 Rønde, Denmark.
  • Iosifidis A; Unit of Computing Sciences, Tampere University, FI-33720 Tampere, Finland.
  • Leese F; School of Engineering, Aarhus University, DK-8200 Aarhus N, Denmark.
  • Mann HMR; Department of Bioscience, Aarhus University, DK-8410 Rønde, Denmark.
  • Meissner K; Arctic Research Centre, Aarhus University, DK-8410 Rønde, Denmark.
  • Melvad C; Natural History Museum Aarhus, DK-8000 Aarhus C, Denmark.
  • Raitoharju J; Department of Biology-Center for Biodiversity Dynamics in a Changing World, Aarhus University, DK-8000 Aarhus C, Denmark.
Proc Natl Acad Sci U S A ; 118(2)2021 01 12.
Article en En | MEDLINE | ID: mdl-33431561
Most animal species on Earth are insects, and recent reports suggest that their abundance is in drastic decline. Although these reports come from a wide range of insect taxa and regions, the evidence to assess the extent of the phenomenon is sparse. Insect populations are challenging to study, and most monitoring methods are labor intensive and inefficient. Advances in computer vision and deep learning provide potential new solutions to this global challenge. Cameras and other sensors can effectively, continuously, and noninvasively perform entomological observations throughout diurnal and seasonal cycles. The physical appearance of specimens can also be captured by automated imaging in the laboratory. When trained on these data, deep learning models can provide estimates of insect abundance, biomass, and diversity. Further, deep learning models can quantify variation in phenotypic traits, behavior, and interactions. Here, we connect recent developments in deep learning and computer vision to the urgent demand for more cost-efficient monitoring of insects and other invertebrates. We present examples of sensor-based monitoring of insects. We show how deep learning tools can be applied to exceptionally large datasets to derive ecological information and discuss the challenges that lie ahead for the implementation of such solutions in entomology. We identify four focal areas, which will facilitate this transformation: 1) validation of image-based taxonomic identification; 2) generation of sufficient training data; 3) development of public, curated reference databases; and 4) solutions to integrate deep learning and molecular tools.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Entomología / Seguimiento de Parámetros Ecológicos / Aprendizaje Profundo / Insectos Límite: Animals Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2021 Tipo del documento: Article Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Entomología / Seguimiento de Parámetros Ecológicos / Aprendizaje Profundo / Insectos Límite: Animals Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2021 Tipo del documento: Article Pais de publicación: Estados Unidos