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Pseudooceanicola algae sp. nov., isolated from the marine macroalga Fucus spiralis, shows genomic and physiological adaptations for an algae-associated lifestyle.
Wolter, Laura A; Wietz, Matthias; Ziesche, Lisa; Breider, Sven; Leinberger, Janina; Poehlein, Anja; Daniel, Rolf; Schulz, Stefan; Brinkhoff, Thorsten.
Afiliación
  • Wolter LA; Institute for Chemistry and Biology of the Marine Environment, Oldenburg, Germany; JST ERATO Nomura Project, Faculty of Life and Environmental Sciences, Tsukuba, Japan. Electronic address: laura.wolter@uni-oldenburg.de.
  • Wietz M; Institute for Chemistry and Biology of the Marine Environment, Oldenburg, Germany; Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany.
  • Ziesche L; Institute of Organic Chemistry, Technische Universität Braunschweig, Germany.
  • Breider S; Institute for Chemistry and Biology of the Marine Environment, Oldenburg, Germany.
  • Leinberger J; Institute for Chemistry and Biology of the Marine Environment, Oldenburg, Germany.
  • Poehlein A; Institute of Microbiology and Genetics, Genomic and Applied Microbiology, and Göttingen Genomics Laboratory, Germany.
  • Daniel R; Institute of Microbiology and Genetics, Genomic and Applied Microbiology, and Göttingen Genomics Laboratory, Germany.
  • Schulz S; Institute of Organic Chemistry, Technische Universität Braunschweig, Germany.
  • Brinkhoff T; Institute for Chemistry and Biology of the Marine Environment, Oldenburg, Germany. Electronic address: t.brinkhoff@icbm.de.
Syst Appl Microbiol ; 44(1): 126166, 2021 Jan.
Article en En | MEDLINE | ID: mdl-33310406
The genus Pseudooceanicola from the alphaproteobacterial Roseobacter group currently includes ten validated species. We herein describe strain Lw-13eT, the first Pseudooceanicola species from marine macroalgae, isolated from the brown alga Fucus spiralis abundant at European and North American coasts. Physiological and pangenome analyses of Lw-13eT showed corresponding adaptive features. Adaptations to the tidal environment include a broad salinity tolerance, degradation of macroalgae-derived substrates (mannitol, mannose, proline), and resistance to several antibiotics and heavy metals. Notably, Lw-13eT can degrade oligomeric alginate via PL15 alginate lyase encoded in a polysaccharide utilization locus (PUL), rarely described for roseobacters to date. Plasmid localization of the PUL strengthens the importance of mobile genetic elements for evolutionary adaptations within the Roseobacter group. PL15 homologs were primarily detected in marine plant-associated metagenomes from coastal environments but not in the open ocean, corroborating its adaptive role in algae-rich habitats. Exceptional is the tolerance of Lw-13eT against the broad-spectrum antibiotic tropodithietic acid, produced by Phaeobacter spp. co-occurring in coastal habitats. Furthermore, Lw-13eT exhibits features resembling terrestrial plant-bacteria associations, i.e. biosynthesis of siderophores, terpenes and volatiles, which may contribute to mutual bacteria-algae interactions. Closest described relative of Lw-13eT is Pseudopuniceibacterium sediminis CY03T with 98.4% 16S rRNA gene sequence similarity. However, protein sequence-based core genome phylogeny and average nucleotide identity indicate affiliation of Lw-13eT with the genus Pseudooceanicola. Based on phylogenetic, physiological and (chemo)taxonomic distinctions, we propose strain Lw-13eT (=DSM 29013T=LMG 30557T) as a novel species with the name Pseudooceanicola algae.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Fucus / Rhodobacteraceae Tipo de estudio: Risk_factors_studies País/Región como asunto: Europa Idioma: En Revista: Syst Appl Microbiol Año: 2021 Tipo del documento: Article Pais de publicación: Alemania

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Fucus / Rhodobacteraceae Tipo de estudio: Risk_factors_studies País/Región como asunto: Europa Idioma: En Revista: Syst Appl Microbiol Año: 2021 Tipo del documento: Article Pais de publicación: Alemania