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Novel Alzheimer Disease Risk Loci and Pathways in African American Individuals Using the African Genome Resources Panel: A Meta-analysis.
Kunkle, Brian W; Schmidt, Michael; Klein, Hans-Ulrich; Naj, Adam C; Hamilton-Nelson, Kara L; Larson, Eric B; Evans, Denis A; De Jager, Phil L; Crane, Paul K; Buxbaum, Joe D; Ertekin-Taner, Nilufer; Barnes, Lisa L; Fallin, M Daniele; Manly, Jennifer J; Go, Rodney C P; Obisesan, Thomas O; Kamboh, M Ilyas; Bennett, David A; Hall, Kathleen S; Goate, Alison M; Foroud, Tatiana M; Martin, Eden R; Wang, Li-Sao; Byrd, Goldie S; Farrer, Lindsay A; Haines, Jonathan L; Schellenberg, Gerard D; Mayeux, Richard; Pericak-Vance, Margaret A; Reitz, Christiane; Graff-Radford, Neill R; Martinez, Izri; Ayodele, Temitope; Logue, Mark W; Cantwell, Laura B; Jean-Francois, Melissa; Kuzma, Amanda B; Adams, L D; Vance, Jeffery M; Cuccaro, Michael L; Chung, Jaeyoon; Mez, Jesse; Lunetta, Kathryn L; Jun, Gyungah R; Lopez, Oscar L; Hendrie, Hugh C; Reiman, Eric M; Kowall, Neil W; Leverenz, James B; Small, Scott A.
Afiliación
  • Kunkle BW; The John P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida.
  • Schmidt M; Dr. John T. MacDonald Foundation, Department of Human Genetics, University of Miami, Miami, Florida.
  • Klein HU; The John P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida.
  • Naj AC; Dr. John T. MacDonald Foundation, Department of Human Genetics, University of Miami, Miami, Florida.
  • Hamilton-Nelson KL; Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York.
  • Larson EB; Gertrude H. Sergievsky Center, Columbia University, New York, New York.
  • Evans DA; Department of Neurology, Columbia University, New York, New York.
  • De Jager PL; Department of Biostatistics and Epidemiology, University of Pennsylvania Perelman School of Medicine, Philadelphia.
  • Crane PK; Penn Neurodegeneration Genomics Center, Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia.
  • Buxbaum JD; The John P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida.
  • Ertekin-Taner N; Department of Medicine, University of Washington, Seattle.
  • Barnes LL; Group Health Research Institute, Group Health, Seattle, Washington.
  • Fallin MD; Rush Institute for Healthy Aging, Rush University Medical Center, Chicago, Illinois.
  • Manly JJ; Department of Internal Medicine, Rush University Medical Center, Chicago, Illinois.
  • Go RCP; Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York.
  • Obisesan TO; Gertrude H. Sergievsky Center, Columbia University, New York, New York.
  • Kamboh MI; Department of Neurology, Columbia University, New York, New York.
  • Bennett DA; Penn Neurodegeneration Genomics Center, Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia.
  • Hall KS; Department of Psychiatry, Mount Sinai School of Medicine, New York, New York.
  • Goate AM; Department of Genetics and Genomics Sciences, Mount Sinai School of Medicine, New York, New York.
  • Foroud TM; Department of Neuroscience, Mount Sinai School of Medicine, New York, New York.
  • Martin ER; Friedman Brain Institute, Mount Sinai School of Medicine, New York, New York.
  • Wang LS; Department of Neuroscience, Mayo Clinic, Jacksonville, Florida.
  • Byrd GS; Department of Neurology, Mayo Clinic, Jacksonville, Florida.
  • Farrer LA; Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois.
  • Haines JL; Department of Behavioral Sciences, Rush University Medical Center, Chicago, Illinois.
  • Schellenberg GD; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, Illinois.
  • Mayeux R; Department of Epidemiology, Johns Hopkins University School of Public Health, Baltimore, Maryland.
  • Pericak-Vance MA; Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York.
  • Reitz C; Gertrude H. Sergievsky Center, Columbia University, New York, New York.
  • Graff-Radford NR; Department of Epidemiology, University of Alabama at Birmingham, Birmingham.
  • Martinez I; Howard University, Howard University Hospital, Washington, DC.
  • Ayodele T; Department of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania.
  • Logue MW; Alzheimer's Disease Research Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
  • Cantwell LB; Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois.
  • Jean-Francois M; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, Illinois.
  • Kuzma AB; Department of Psychiatry, Indiana University School of Medicine, Indianapolis.
  • Adams LD; Department of Genetics and Genomics Sciences, Mount Sinai School of Medicine, New York, New York.
  • Vance JM; Department of Neuroscience, Mount Sinai School of Medicine, New York, New York.
  • Cuccaro ML; Friedman Brain Institute, Mount Sinai School of Medicine, New York, New York.
  • Chung J; Ronald M. Loeb Center for Alzheimer's Disease, Icahn School of Medicine at Mount Sinai, New York, New York.
  • Mez J; Department of Medical and Molecular Genetics, Indiana University, Indianapolis.
  • Lunetta KL; The John P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida.
  • Jun GR; Dr. John T. MacDonald Foundation, Department of Human Genetics, University of Miami, Miami, Florida.
  • Lopez OL; Penn Neurodegeneration Genomics Center, Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia.
  • Hendrie HC; Maya Angelou Center for Health Equity, Wake Forest School of Medicine, Winston-Salem, North Carolina.
  • Reiman EM; Department of Medicine (Biomedical Genetics), Boston University School of Medicine, Boston, Massachusetts.
  • Kowall NW; Department of Neurology, Boston University School of Medicine, Boston, Massachusetts.
  • Leverenz JB; Department of Biostatistics, Boston University School of Public Health, Boston, Massachusetts.
  • Small SA; Department of Ophthalmology, Boston University School of Medicine, Boston, Massachusetts.
JAMA Neurol ; 78(1): 102-113, 2021 01 01.
Article en En | MEDLINE | ID: mdl-33074286
Importance: Compared with non-Hispanic White individuals, African American individuals from the same community are approximately twice as likely to develop Alzheimer disease. Despite this disparity, the largest Alzheimer disease genome-wide association studies to date have been conducted in non-Hispanic White individuals. In the largest association analyses of Alzheimer disease in African American individuals, ABCA7, TREM2, and an intergenic locus at 5q35 were previously implicated. Objective: To identify additional risk loci in African American individuals by increasing the sample size and using the African Genome Resource panel. Design, Setting, and Participants: This genome-wide association meta-analysis used case-control and family-based data sets from the Alzheimer Disease Genetics Consortium. There were multiple recruitment sites throughout the United States that included individuals with Alzheimer disease and controls of African American ancestry. Analysis began October 2018 and ended September 2019. Main Outcomes and Measures: Diagnosis of Alzheimer disease. Results: A total of 2784 individuals with Alzheimer disease (1944 female [69.8%]) and 5222 controls (3743 female [71.7%]) were analyzed (mean [SD] age at last evaluation, 74.2 [13.6] years). Associations with 4 novel common loci centered near the intracellular glycoprotein trafficking gene EDEM1 (3p26; P = 8.9 × 10-7), near the immune response gene ALCAM (3q13; P = 9.3 × 10-7), within GPC6 (13q31; P = 4.1 × 10-7), a gene critical for recruitment of glutamatergic receptors to the neuronal membrane, and within VRK3 (19q13.33; P = 3.5 × 10-7), a gene involved in glutamate neurotoxicity, were identified. In addition, several loci associated with rare variants, including a genome-wide significant intergenic locus near IGF1R at 15q26 (P = 1.7 × 10-9) and 6 additional loci with suggestive significance (P ≤ 5 × 10-7) such as API5 at 11p12 (P = 8.8 × 10-8) and RBFOX1 at 16p13 (P = 5.4 × 10-7) were identified. Gene expression data from brain tissue demonstrate association of ALCAM, ARAP1, GPC6, and RBFOX1 with brain ß-amyloid load. Of 25 known loci associated with Alzheimer disease in non-Hispanic White individuals, only APOE, ABCA7, TREM2, BIN1, CD2AP, FERMT2, and WWOX were implicated at a nominal significance level or stronger in African American individuals. Pathway analyses strongly support the notion that immunity, lipid processing, and intracellular trafficking pathways underlying Alzheimer disease in African American individuals overlap with those observed in non-Hispanic White individuals. A new pathway emerging from these analyses is the kidney system, suggesting a novel mechanism for Alzheimer disease that needs further exploration. Conclusions and Relevance: While the major pathways involved in Alzheimer disease etiology in African American individuals are similar to those in non-Hispanic White individuals, the disease-associated loci within these pathways differ.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Negro o Afroamericano / Predisposición Genética a la Enfermedad / Enfermedad de Alzheimer Tipo de estudio: Etiology_studies / Risk_factors_studies / Systematic_reviews Límite: Aged / Female / Humans / Male / Middle aged Idioma: En Revista: JAMA Neurol Año: 2021 Tipo del documento: Article Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Negro o Afroamericano / Predisposición Genética a la Enfermedad / Enfermedad de Alzheimer Tipo de estudio: Etiology_studies / Risk_factors_studies / Systematic_reviews Límite: Aged / Female / Humans / Male / Middle aged Idioma: En Revista: JAMA Neurol Año: 2021 Tipo del documento: Article Pais de publicación: Estados Unidos