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Pan-cancer driver copy number alterations identified by joint expression/CNA data analysis.
Wang, Gaojianyong; Anastassiou, Dimitris.
Afiliación
  • Wang G; Department of Electrical Engineering, Columbia University, New York, NY, 10027, USA.
  • Anastassiou D; Department of Electrical Engineering, Columbia University, New York, NY, 10027, USA. d.anastassiou@columbia.edu.
Sci Rep ; 10(1): 17199, 2020 10 14.
Article en En | MEDLINE | ID: mdl-33057153
Analysis of large gene expression datasets from biopsies of cancer patients can identify co-expression signatures representing particular biomolecular events in cancer. Some of these signatures involve genomically co-localized genes resulting from the presence of copy number alterations (CNAs), for which analysis of the expression of the underlying genes provides valuable information about their combined role as oncogenes or tumor suppressor genes. Here we focus on the discovery and interpretation of such signatures that are present in multiple cancer types due to driver amplifications and deletions in particular regions of the genome after doing a comprehensive analysis combining both gene expression and CNA data from The Cancer Genome Atlas.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Oncogenes / Variaciones en el Número de Copia de ADN / Neoplasias Límite: Humans Idioma: En Revista: Sci Rep Año: 2020 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Oncogenes / Variaciones en el Número de Copia de ADN / Neoplasias Límite: Humans Idioma: En Revista: Sci Rep Año: 2020 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Reino Unido