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Single cell transcriptomes of normal endometrial derived organoids uncover novel cell type markers and cryptic differentiation of primary tumours.
Cochrane, Dawn R; Campbell, Kieran R; Greening, Kendall; Ho, Germain C; Hopkins, James; Bui, Minh; Douglas, J Maxwell; Sharlandjieva, Vassilena; Munzur, Asli D; Lai, Daniel; DeGrood, Maya; Gibbard, Evan W; Leung, Samuel; Boyd, Niki; Cheng, Angela S; Chow, Christine; Lim, Jamie Lp; Farnell, David A; Kommoss, Stefan; Kommoss, Friedrich; Roth, Andrew; Hoang, Lien; McAlpine, Jessica N; Shah, Sohrab P; Huntsman, David G.
Afiliación
  • Cochrane DR; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Campbell KR; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Greening K; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
  • Ho GC; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
  • Hopkins J; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Bui M; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Douglas JM; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Sharlandjieva V; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Munzur AD; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Lai D; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • DeGrood M; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
  • Gibbard EW; Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada.
  • Leung S; Genetic Pathology Evaluation Centre, Vancouver General Hospital, Vancouver, BC, Canada.
  • Boyd N; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Cheng AS; Genetic Pathology Evaluation Centre, Vancouver General Hospital, Vancouver, BC, Canada.
  • Chow C; Genetic Pathology Evaluation Centre, Vancouver General Hospital, Vancouver, BC, Canada.
  • Lim JL; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA.
  • Farnell DA; Department of Anatomical Pathology, Vancouver General Hospital, Vancouver, BC, Canada.
  • Kommoss S; Department of Obstetrics and Gynecology, University of Tübingen, Tübingen, Germany.
  • Kommoss F; Institute of Pathology, Medizin Campus Bodensee, Friedrichshafen, Germany.
  • Roth A; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
  • Hoang L; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
  • McAlpine JN; Department of Gynecology and Obstetrics, University of British Columbia, Vancouver, BC, Canada.
  • Shah SP; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA.
  • Huntsman DG; Department of Molecular Oncology, BC Cancer Agency, Vancouver, BC, Canada.
J Pathol ; 252(2): 201-214, 2020 10.
Article en En | MEDLINE | ID: mdl-32686114
Endometrial carcinoma, the most common gynaecological cancer, develops from endometrial epithelium which is composed of secretory and ciliated cells. Pathologic classification is unreliable and there is a need for prognostic tools. We used single cell sequencing to study organoid model systems derived from normal endometrial endometrium to discover novel markers specific for endometrial ciliated or secretory cells. A marker of secretory cells (MPST) and several markers of ciliated cells (FAM92B, WDR16, and DYDC2) were validated by immunohistochemistry on organoids and tissue sections. We performed single cell sequencing on endometrial and ovarian tumours and found both secretory-like and ciliated-like tumour cells. We found that ciliated cell markers (DYDC2, CTH, FOXJ1, and p73) and the secretory cell marker MPST were expressed in endometrial tumours and positively correlated with disease-specific and overall survival of endometrial cancer patients. These findings suggest that expression of differentiation markers in tumours correlates with less aggressive disease, as would be expected for tumours that retain differentiation capacity, albeit cryptic in the case of ciliated cells. These markers could be used to improve the risk stratification of endometrial cancer patients, thereby improving their management. We further assessed whether consideration of MPST expression could refine the ProMiSE molecular classification system for endometrial tumours. We found that higher expression levels of MPST could be used to refine stratification of three of the four ProMiSE molecular subgroups, and that any level of MPST expression was able to significantly refine risk stratification of the copy number high subgroup which has the worst prognosis. Taken together, this shows that single cell sequencing of putative cells of origin has the potential to uncover novel biomarkers that could be used to guide management of cancers. © 2020 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biomarcadores de Tumor / Neoplasias Endometriales / Análisis de Secuencia de ARN / Carcinoma Endometrioide Tipo de estudio: Prognostic_studies Límite: Female / Humans Idioma: En Revista: J Pathol Año: 2020 Tipo del documento: Article País de afiliación: Canadá Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biomarcadores de Tumor / Neoplasias Endometriales / Análisis de Secuencia de ARN / Carcinoma Endometrioide Tipo de estudio: Prognostic_studies Límite: Female / Humans Idioma: En Revista: J Pathol Año: 2020 Tipo del documento: Article País de afiliación: Canadá Pais de publicación: Reino Unido