The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing.

Rodriguez, Rebecca M; Hernandez, Brenda Y; Menor, Mark; Deng, Youping; Khadka, Vedbar S

Rodriguez, Rebecca M; Hernandez, Brenda Y; Menor, Mark; Deng, Youping; Khadka, Vedbar S.

Afiliación

Rodriguez RM; Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii Manoa, Honolulu, HI, United States.
Hernandez BY; Population Sciences in the Pacific Program-Cancer Epidemiology, University of Hawaii Cancer Center, Honolulu, HI, United States.
Menor M; Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, United States.
Deng Y; Population Sciences in the Pacific Program-Cancer Epidemiology, University of Hawaii Cancer Center, Honolulu, HI, United States.
Khadka VS; Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii Manoa, Honolulu, HI, United States.

Comput Struct Biotechnol J ; 18: 631-641, 2020.

Article en En | MEDLINE | ID: mdl-32257046

Palabras clave

BLCA, bladder carcinoma; CESC, cervical & endocervical squamous cell carcinomas; COAD, colon adenocarcinoma; COREAD, colon and rectal adenocarcinoma TCGA cohorts; Cancer microbiome; Exome sequencing; HNSC, head & neck squamous cell carcinoma; L2FC, log 2 fold change; LIHC, liver hepatocellular carcinoma; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma; Microbial landscape; READ, rectal adenocarcinoma; STAD, stomach adenocarcinoma; TCGA; TCGA, The Cancer Genome Atlas

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Comput Struct Biotechnol J Año: 2020 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Países Bajos

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