Your browser doesn't support javascript.
loading
Devosia ginsengisoli sp. nov., isolated from ginseng cultivation soil.
Quan, Xiao-Tian; Siddiqi, Muhammad Zubair; Liu, Qing-Zhen; Lee, Sang-Mi; Im, Wan-Taek.
Afiliación
  • Quan XT; Department of Biological Sciences, School of Life Sciences, Nantong University, 9 Seyuan-lu, Nantong, Jiangsu, 226-019, PR China.
  • Siddiqi MZ; AceEMzyme Co., Ltd., Room 403, Academic Industry Cooperation, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
  • Liu QZ; Department of Biotechnology, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
  • Lee SM; AceEMzyme Co., Ltd., Room 403, Academic Industry Cooperation, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
  • Im WT; Department of Biotechnology, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
Int J Syst Evol Microbiol ; 70(3): 1489-1495, 2020 Mar.
Article en En | MEDLINE | ID: mdl-32228770
A Gram-stain-negative, strictly aerobic, motile, ivory-coloured and rod-shaped bacterium (designated Gsoil 520T) isolated from ginseng cultivation soil was characterized by using a polyphasic approach to clarify its taxonomic position. Strain Gsoil 520T was observed to grow optimally at 30 °C and pH 7.0 on Reasoner's 2A agar medium. The results of phylogenetic analysis, based on 16S rRNA gene sequence similarities, indicated that Gsoil 520T belongs to the genus Devosia of the family Hyphomicrobiaceae and was most closely related to Devosia epidermidihirudinis E84T (98.0 %), Devosia yakushimensis Yak96BT (97.7 %), Devosia neptuniae J1T (97.7 %) and Devosia chinhatensis IPL18T (96.8 %). The complete genome of strain Gsoil 520T is a presumptive circular chromosome of 4 480 314 base pairs having G+C content of 63.7 mol%. A total of 4 354 genes, 4 303 CDS and 43 rRNA genes were assigned a putative function. The major isoprenoid quinone was Q-10. The main polar lipids were phosphatidylglycerol, diphosphatidylglycerol and two unidentified aminolipids (AL1 and AL3). The predominant fatty acids of strain Gsoil 520T were C18 : 1ω7c 11-methyl, C16 : 0 and C18 : 1ω7c/C18 : 1ω6c (summed feature 8) supporting the affiliation of strain Gsoil 520T to the genus Devosia. The low values of DNA-DNA hybridization distinguished strain Gsoil 520T from the recognized species of the genus Devosia. Thus, the novel isolate represents a novel species of the genus Devosia, for which the name Devosia ginsengisoli sp. nov. is proposed, with the type strain Gsoil 520T (=KACC 19440T=LMG 30329T).
Asunto(s)
Palabras clave
Texto completo
Añadir a Mi BVS
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Microbiología del Suelo / Hyphomicrobiaceae / Panax País/Región como asunto: Asia Idioma: En Revista: Int J Syst Evol Microbiol Asunto de la revista: MICROBIOLOGIA Año: 2020 Tipo del documento: Article Pais de publicación: Reino Unido
Texto completo
Añadir a Mi BVS
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Microbiología del Suelo / Hyphomicrobiaceae / Panax País/Región como asunto: Asia Idioma: En Revista: Int J Syst Evol Microbiol Asunto de la revista: MICROBIOLOGIA Año: 2020 Tipo del documento: Article Pais de publicación: Reino Unido