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Implementation and use of whole exome sequencing for metastatic solid cancer.
Réda, Manon; Richard, Corentin; Bertaut, Aurelie; Niogret, Julie; Collot, Thomas; Fumet, Jean David; Blanc, Julie; Truntzer, Caroline; Desmoulins, Isabelle; Ladoire, Sylvain; Hennequin, Audrey; Favier, Laure; Bengrine, Leila; Vincent, Julie; Hervieu, Alice; Dusserre, Jean-Florian Guion; Lepage, Come; Foucher, Pascal; Borg, Christophe; Albuisson, Juliette; Arnould, Laurent; Nambot, Sophie; Faivre, Laurence; Boidot, Romain; Ghiringhelli, Francois.
Afiliación
  • Réda M; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
  • Richard C; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and Immunotherapy Medical Institute, Dijon, France; INSERM U1231, Dijon, France.
  • Bertaut A; Methodology, Data-Management, and Biostatistics Unit, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France.
  • Niogret J; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
  • Collot T; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
  • Fumet JD; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
  • Blanc J; Methodology, Data-Management, and Biostatistics Unit, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France.
  • Truntzer C; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Genomic and Immunotherapy Medical Institute, Dijon, France.
  • Desmoulins I; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France.
  • Ladoire S; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
  • Hennequin A; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France.
  • Favier L; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France.
  • Bengrine L; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France.
  • Vincent J; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; INSERM U1231, Dijon, France.
  • Hervieu A; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France.
  • Dusserre JG; Private hospital Sainte Marie, Chalon sur Saône, France.
  • Lepage C; INSERM U1231, Dijon, France; Department of Gastroenterology, Dijon University Hospital, Dijon, France.
  • Foucher P; Department of Thoracic Oncology, Dijon University Hospital, Dijon, France.
  • Borg C; Department of Medical Oncology, Besançon University Hospital, Besancon, France.
  • Albuisson J; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Genomic and Immunotherapy Medical Institute, Dijon, France; Department of Tumour Biology and Pathology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France.
  • Arnould L; Department of Tumour Biology and Pathology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France.
  • Nambot S; INSERM U1231, Dijon, France; Centre de Référence Maladies Rares "Anomalies du Développement et syndromes malformatifs", FHU-TRANSLAD, Dijon University Hospital, Dijon, France.
  • Faivre L; INSERM U1231, Dijon, France; Centre de Référence Maladies Rares "Anomalies du Développement et syndromes malformatifs", FHU-TRANSLAD, Dijon University Hospital, Dijon, France.
  • Boidot R; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and Immunotherapy Medical Institute, Dijon, France; INSERM U1231, Dijon, France; Department of Tumour Biology and Pathology, Georges F
  • Ghiringhelli F; Department of Medical Oncology, Georges François Leclerc Cancer Center - UNICANCER, 1 rue Professeur Marion, Dijon 21000, France; Platform of Transfer in Cancer Biology, Georges François Leclerc Cancer Center - UNICANCER, Dijon, France; Université Bourgogne Franche-Comté, Dijon, France; Genomic and
EBioMedicine ; 51: 102624, 2020 Jan.
Article en En | MEDLINE | ID: mdl-31923800
BACKGROUND: Genomically-guided clinical trials are performed across different tumor types sharing genetic mutations, but trial organization remains complex. Here we address the feasibility and utility of routine somatic and constitutional exome analysis in metastatic cancer patients. METHODS: Exoma trial (NCT02840604) is a multicenter, prospective clinical trial. Eligible patients presented a metastatic cancer progressing after at least one line of systemic therapy. Constitutional genetics testing required geneticist consultation. Somatic and germline exome analysis was restricted to 317 genes. Variants were classified and molecular tumor board made therapeutic recommendations based on ESMO guidelines. Primary endpoint was the feasibility of the approach evaluated by the proportion of patient that received a therapeutic proposal. FINDINGS: Between May 2016 and October 2018, 506 patients were included. Median time required for tumor sample reception was 8 days. Median time from sample reception to results was 52 days. Somatic analysis was performed for 456 patients (90.1%). Both somatic and constitutional analyses were successfully performed for 386 patients (76.3%). In total, 342 patients (75%) received a therapeutic proposal. Genetic susceptibility to cancer was found in 35 (9%) patients. Only, 79 patients (23.1%) were treated with NGS matched therapy mainly PI3K/AKT/mTOR inhibitors 22 (27.8%), followed by PARP inhibitors 19 (24.1%), antiangiogenics 17 (21.5%), MEK inhibitors 7 (8.9%) and immunotherapy 5 (6.3%). Matched treatment was finally stopped because of disease progression 50 (63%), treatment toxicity 18 (23%), patients' death 4 (5%). PFS2/PFS1 ratio was > 1,3 for 23,5% of patients treated with the NGS matched therapy and 23,7% of patients treated with standard therapy. INTERPRETATION: Study shows that exome analysis is feasible in cancer routine care. This strategy improves detection of genetic predispositions and enhances access to target therapies. However, no differences were observed between PFS ratios of patients treated with matched therapy versus standard therapy. FUNDING: This work was funding by the centre Georges Francois Leclerc.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Secuenciación del Exoma / Neoplasias Tipo de estudio: Clinical_trials / Guideline Límite: Adult / Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: EBioMedicine Año: 2020 Tipo del documento: Article Pais de publicación: Países Bajos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Secuenciación del Exoma / Neoplasias Tipo de estudio: Clinical_trials / Guideline Límite: Adult / Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: EBioMedicine Año: 2020 Tipo del documento: Article Pais de publicación: Países Bajos