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Association mapping of loci linked to copper, phosphorus, and potassium concentrations in the seeds of C. arietinum and C. reticulatum.
Ozkuru, Esin; Ates, Duygu; Nemli, Seda; Erdogmus, Semih; Karaca, Nur; Yilmaz, Hasan; Yagmur, Bulent; Kartal, Canan; Tosun, Muzaffer; Ozdestan, Ozgul; Otles, Semih; Kahriman, Abdullah; Tanyolac, Bahattin.
Afiliación
  • Ozkuru E; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Ates D; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Nemli S; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Erdogmus S; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Karaca N; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Yilmaz H; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey.
  • Yagmur B; Ege University, Department of Plant and Soil Science, 35040 Bornova-Izmir, Turkey.
  • Kartal C; Ege University, Department of Food Science, 35040 Bornova-Izmir, Turkey.
  • Tosun M; Ege University, Department of Field Crops, 35040 Bornova-Izmir, Turkey.
  • Ozdestan O; Ege University, Department of Food Science, 35040 Bornova-Izmir, Turkey.
  • Otles S; Ege University, Department of Food Science, 35040 Bornova-Izmir, Turkey.
  • Kahriman A; Harran University, Department of Field Crops, 63000 Sanli Urfa, Turkey.
  • Tanyolac B; Ege University, Department of Bioengineering, 35040 Bornova-Izmir, Turkey. Electronic address: bahattin.tanyolac@gmail.com.
Genomics ; 111(6): 1873-1881, 2019 12.
Article en En | MEDLINE | ID: mdl-30594584
Due to its high nutritional value, chickpea is one of the most important and cost-effective legumes for human diet. Nutrient elements, such as Cu, P, K have numerous essential functions for the human metabolism. In this study, association mapping of loci linked to the seed Cu, P and K concentrations were performed on a population consisting of 107 Cicer reticulatum and 73 Cicer arietinum individuals in four environments (two locations x two years). A total of 121,840 SNPs were genotyped across 180 individuals by GBS analysis. The association mapping between the SNP markers and the seed Cu, P, K concentrations were identified and eight SNPs were found to be significantly associated with variations in three nutrient elements in more than two environments This research suggests that association mapping is a useful methodology for the identification of loci controlling the Cu, P and K uptake in chickpea seeds for further association mapping, molecular breeding, and marker-assisted selection and plant breeding studies and provides a broader understanding of the relationship between the investigated Cicer species and the effects of environmental conditions.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Fósforo / Potasio / Semillas / Cobre / Polimorfismo de Nucleótido Simple / Cicer / Sitios Genéticos Tipo de estudio: Risk_factors_studies Idioma: En Revista: Genomics Asunto de la revista: GENETICA Año: 2019 Tipo del documento: Article País de afiliación: Turquía Pais de publicación: Estados Unidos
Texto completo
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Fósforo / Potasio / Semillas / Cobre / Polimorfismo de Nucleótido Simple / Cicer / Sitios Genéticos Tipo de estudio: Risk_factors_studies Idioma: En Revista: Genomics Asunto de la revista: GENETICA Año: 2019 Tipo del documento: Article País de afiliación: Turquía Pais de publicación: Estados Unidos