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---A web resource for nutrient use efficiency-related genes, quantitative trait loci and microRNAs in important cereals and model plants.
Kumar, Anuj; Pandeya, Ajay; Malik, Girik; Sharma, Mansi; P, Hima Kumari; S, Anil Kumar; Gahlaut, Vijay; Gajula, M N V Prasad; Singh, Krishna Pal; Suravajhala, Prashanth; Balyan, Harindra Singh; Gupta, Pushpendra K.
Afiliación
  • Kumar A; Advanced Centre for Computational and Applied Biotechnology, Uttarakhand Council for Biotechnology (UCB), Dehradun, Uttarakhand, 248007, India.
  • Pandeya A; Department of Biotechnology, Graphic Era University, Dehradun, Uttarakhand, 248002, India.
  • Malik G; Bioclues.org, Hyderabad, 500072, India.
  • Sharma M; Labrynthe, New Delhi, India.
  • P HK; Bioinformatics Laboratory, Institute of Cytology and Preventative Oncology, Noida, 201301, India.
  • S AK; Department of Genetics, Osmania University, Hyderabad, Telengana, 500007, India.
  • Gahlaut V; Department of Genetics, Osmania University, Hyderabad, Telengana, 500007, India.
  • Gajula MNVP; Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, Uttar Pradesh, 250004, India.
  • Singh KP; Institute of Biotechnology, Professor Jayashankar Telangana State Agricultural University, Rajendranagar , Telangana, 500030, India.
  • Suravajhala P; Advanced Centre for Computational and Applied Biotechnology, Uttarakhand Council for Biotechnology (UCB), Dehradun, Uttarakhand, 248007, India.
  • Balyan HS; Bioclues.org, Hyderabad, 500072, India.
  • Gupta PK; Department of Biotechnology and Bioinformatics, Birla Institute of Technology & Science, Jaipur, Rajasthan, 302001, India.
F1000Res ; 72018.
Article en En | MEDLINE | ID: mdl-30135718
Cereals are key contributors to global food security. Genes involved in the uptake (transport), assimilation and utilization of macro- and micronutrients are responsible for the presence of these nutrients in grain and straw. Although many genomic databases for cereals are available, there is currently no cohesive web resource of manually curated nutrient use efficiency (NtUE)-related genes and quantitative trait loci (QTLs). In this study, we present a web-resource containing information on NtUE-related genes/QTLs and the corresponding available microRNAs for some of these genes in four major cereal crops (wheat ( Triticum aestivum), rice ( Oryza sativa), maize ( Zea mays), barley ( Hordeum vulgare)), two alien species related to wheat ( Triticum urartu and Aegilops tauschii), and two model species ( Brachypodium distachyon and Arabidopsis thaliana). Gene annotations integrated in the current web resource were manually curated from the existing databases and the available literature. The primary goal of developing this web resource is to provide descriptions of the NtUE-related genes and their functional annotation. MicroRNAs targeting some of the NtUE related genes and the QTLs for NtUE-related traits are also included. The genomic information embedded in the web resource should help users to search for the desired information.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Nutrientes / Grano Comestible / Biología Computacional / Internet / MicroARNs / Sitios de Carácter Cuantitativo Tipo de estudio: Prognostic_studies Idioma: En Revista: F1000Res Año: 2018 Tipo del documento: Article País de afiliación: India Pais de publicación: Reino Unido
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Nutrientes / Grano Comestible / Biología Computacional / Internet / MicroARNs / Sitios de Carácter Cuantitativo Tipo de estudio: Prognostic_studies Idioma: En Revista: F1000Res Año: 2018 Tipo del documento: Article País de afiliación: India Pais de publicación: Reino Unido