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Determination of Multimodal Isotopic Distributions: The Case of a (15)N Labeled Protein Produced into Hairy Roots.
Trouillard, Romain; Hubert-Roux, Marie; Tognetti, Vincent; Guilhaudis, Laure; Plasson, Carole; Menu-Bouaouiche, Laurence; Coquet, Laurent; Guerineau, François; Hardouin, Julie; Ele Ekouna, Jean-Pierre; Cosette, Pascal; Lerouge, Patrice; Boitel-Conti, Michèle; Afonso, Carlos; Ségalas-Milazzo, Isabelle.
Afiliación
  • Trouillard R; †Normandie Université, COBRA, UMR6014 and IRIB; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Hubert-Roux M; ‡Normandie Université, COBRA, UMR6014 and FR3038; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Tognetti V; ‡Normandie Université, COBRA, UMR6014 and FR3038; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Guilhaudis L; †Normandie Université, COBRA, UMR6014 and IRIB; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Plasson C; §Normandie Université, Glyco-MEV, EA 4358 and IRIB, Université de Rouen, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Menu-Bouaouiche L; §Normandie Université, Glyco-MEV, EA 4358 and IRIB, Université de Rouen, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Coquet L; ∥CNRS UMR 6270, PBS, Plateforme Protéomique PISSARO, IRIB, FR3038 INC3M, Normandie Université, Université de Rouen, Boulevard Maurice de Broglie, 76821 Mont-Saint-Aignan Cedex, France.
  • Guerineau F; ⊥Biologie des plantes et innovation (BioPI), Université de Picardie Jules Verne, 33 rue St Leu, 80039 Amiens, France.
  • Hardouin J; ∥CNRS UMR 6270, PBS, Plateforme Protéomique PISSARO, IRIB, FR3038 INC3M, Normandie Université, Université de Rouen, Boulevard Maurice de Broglie, 76821 Mont-Saint-Aignan Cedex, France.
  • Ele Ekouna JP; ⊥Biologie des plantes et innovation (BioPI), Université de Picardie Jules Verne, 33 rue St Leu, 80039 Amiens, France.
  • Cosette P; ∥CNRS UMR 6270, PBS, Plateforme Protéomique PISSARO, IRIB, FR3038 INC3M, Normandie Université, Université de Rouen, Boulevard Maurice de Broglie, 76821 Mont-Saint-Aignan Cedex, France.
  • Lerouge P; §Normandie Université, Glyco-MEV, EA 4358 and IRIB, Université de Rouen, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Boitel-Conti M; ⊥Biologie des plantes et innovation (BioPI), Université de Picardie Jules Verne, 33 rue St Leu, 80039 Amiens, France.
  • Afonso C; ‡Normandie Université, COBRA, UMR6014 and FR3038; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
  • Ségalas-Milazzo I; †Normandie Université, COBRA, UMR6014 and IRIB; Université de Rouen; INSA de Rouen; CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France.
Anal Chem ; 87(12): 5938-46, 2015 Jun 16.
Article en En | MEDLINE | ID: mdl-25973921
Isotopic labeling is widely used in various fields like proteomics, metabolomics, fluxomics, as well as in NMR structural studies, but it requires an efficient determination of the isotopic enrichment. Mass spectrometry is the method of choice for such analysis. However, when complex expression systems like hairy roots are used for production, multiple populations of labeled proteins may be obtained. If the isotopic incorporation determination is actually well-known for unimodal distributions, the multimodal distributions have scarcely been investigated. Actually, only a few approaches allow the determination of the different labeled population proportions from multimodal distributions. Furthermore, they cannot be used when the number of the populations and their respective isotope ratios are unknown. The present study implements a new strategy to measure the (15)N labeled populations inside a multimodal distribution knowing only the peptide sequence and peak intensities from mass spectrometry analyses. Noteworthy, it could be applied to other elements, like carbon and hydrogen, and extended to a larger range of biomolecules.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Raíces de Plantas / Brassica rapa / Proteínas Fluorescentes Verdes Límite: Humans Idioma: En Revista: Anal Chem Año: 2015 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Raíces de Plantas / Brassica rapa / Proteínas Fluorescentes Verdes Límite: Humans Idioma: En Revista: Anal Chem Año: 2015 Tipo del documento: Article País de afiliación: Francia Pais de publicación: Estados Unidos