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MHC-NP: predicting peptides naturally processed by the MHC.
Giguère, Sébastien; Drouin, Alexandre; Lacoste, Alexandre; Marchand, Mario; Corbeil, Jacques; Laviolette, François.
Afiliación
  • Giguère S; Department of Computer Science and Software Engineering, Pavillon Adrien-Pouliot, 1065, av. De la Médecine, Université Laval, Québec, Québec, G1V 0A6, Canada. Electronic address: sebastien.giguere.8@ulaval.ca.
J Immunol Methods ; 400-401: 30-6, 2013 Dec 31.
Article en En | MEDLINE | ID: mdl-24144535
We present MHC-NP, a tool for predicting peptides naturally processed by the MHC pathway. The method was part of the 2nd Machine Learning Competition in Immunology and yielded state-of-the-art accuracy for the prediction of peptides eluted from human HLA-A*02:01, HLA-B*07:02, HLA-B*35:01, HLA-B*44:03, HLA-B*53:01, HLA-B*57:01 and mouse H2-D(b) and H2-K(b) MHC molecules. We briefly explain the theory and motivations that have led to developing this tool. General applicability in the field of immunology and specifically epitope-based vaccine are expected. Our tool is freely available online and hosted by the Immune Epitope Database at http://tools.immuneepitope.org/mhcnp/.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Péptidos / Programas Informáticos / Inteligencia Artificial / Mapeo Epitopo / Complejo Mayor de Histocompatibilidad Tipo de estudio: Prognostic_studies / Risk_factors_studies Límite: Animals / Humans Idioma: En Revista: J Immunol Methods Año: 2013 Tipo del documento: Article Pais de publicación: Países Bajos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Péptidos / Programas Informáticos / Inteligencia Artificial / Mapeo Epitopo / Complejo Mayor de Histocompatibilidad Tipo de estudio: Prognostic_studies / Risk_factors_studies Límite: Animals / Humans Idioma: En Revista: J Immunol Methods Año: 2013 Tipo del documento: Article Pais de publicación: Países Bajos