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Effectiveness of Whole-Exome Sequencing for the Identification of Causal Mutations in Patients with Suspected Inherited Ocular Diseases
Ordoñez-Labastida, Vianey; Montes-Almanza, Luis; García-Martínez, Froylan; Zenteno, Juan C..
Afiliación
  • Ordoñez-Labastida, Vianey; Universidad Nacional Autónoma de México. Faculty of Medicine. Mexico City. MX
  • Montes-Almanza, Luis; Universidad Nacional Autónoma de México. Faculty of Medicine. Mexico City. MX
  • García-Martínez, Froylan; Universidad Nacional Autónoma de México. Faculty of Medicine. Mexico City. MX
  • Zenteno, Juan C.; Universidad Nacional Autónoma de México. Faculty of Medicine. Mexico City. MX
Rev. invest. clín ; 74(4): 219-226, Jul.-Aug. 2022. graf
Article en En | LILACS-Express | LILACS | ID: biblio-1409584
Biblioteca responsable: MX1.1
ABSTRACT
ABSTRACT

Background:

Genetic eye disorders, affecting around one in 1000 people, encompass a diverse group of diseases causing severe visual deficiency. The recent adoption of next-generation sequencing techniques, including whole-exome sequencing (WES), in medicine has greatly enhanced diagnostic rates of genetically heterogeneous diseases.

Objectives:

The objectives of the study were to assess the diagnostic yield of WES in a cohort of Mexican individuals with suspected genetic eye disorders and to evaluate the improvement of diagnostic rates by reanalysis of WES data in patients without an initial molecular diagnosis.

Methods:

A total of 90 probands with ocular anomalies of suspected genetic origin were ascertained. Patients underwent WES in leukocytic DNA. Bioinformatics analysis and Sanger sequencing were used to confirm the disease-causing variants. Only variants identified as pathogenic or likely pathogenic were considered as causal.

Results:

Initial analysis revealed causal mutations in 46 cases (51%). Reanalysis of WES data 12 months after first analysis resulted in the identification of additional causal variants in 6 patients (7%), increasing the molecular diagnostic yield to 58%. The highest diagnostic rates by disease categories corresponded to hereditary retinal dystrophies (77%) and to anomalies of the anterior segment of the eye (47%).

Conclusion:

Our study demonstrates that WES is an effective approach for genetic diagnosis of genetic ocular diseases and that reanalysis of WES data can improve the diagnostic yield.
Palabras clave

Texto completo: 1 Colección: 01-internacional Base de datos: LILACS Tipo de estudio: Diagnostic_studies Idioma: En Revista: Rev. invest. clín Asunto de la revista: MEDICINA Año: 2022 Tipo del documento: Article País de afiliación: México Pais de publicación: México

Texto completo: 1 Colección: 01-internacional Base de datos: LILACS Tipo de estudio: Diagnostic_studies Idioma: En Revista: Rev. invest. clín Asunto de la revista: MEDICINA Año: 2022 Tipo del documento: Article País de afiliación: México Pais de publicación: México