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1.
Proc Natl Acad Sci U S A ; 121(30): e2319628121, 2024 Jul 23.
Artigo em Inglês | MEDLINE | ID: mdl-39012821

RESUMO

Heterotrophic protists are vital in Earth's ecosystems, influencing carbon and nutrient cycles and occupying key positions in food webs as microbial predators. Fossils and molecular data suggest the emergence of predatory microeukaryotes and the transition to a eukaryote-rich marine environment by 800 million years ago (Ma). Neoproterozoic vase-shaped microfossils (VSMs) linked to Arcellinida testate amoebae represent the oldest evidence of heterotrophic microeukaryotes. This study explores the phylogenetic relationship and divergence times of modern Arcellinida and related taxa using a relaxed molecular clock approach. We estimate the origin of nodes leading to extant members of the Arcellinida Order to have happened during the latest Mesoproterozoic and Neoproterozoic (1054 to 661 Ma), while the divergence of extant infraorders postdates the Silurian. Our results demonstrate that at least one major heterotrophic eukaryote lineage originated during the Neoproterozoic. A putative radiation of eukaryotic groups (e.g., Arcellinida) during the early-Neoproterozoic sustained by favorable ecological and environmental conditions may have contributed to eukaryotic life endurance during the Cryogenian severe ice ages. Moreover, we infer that Arcellinida most likely already inhabited terrestrial habitats during the Neoproterozoic, coexisting with terrestrial Fungi and green algae, before land plant radiation. The most recent extant Arcellinida groups diverged during the Silurian Period, alongside other taxa within Fungi and flowering plants. These findings shed light on heterotrophic microeukaryotes' evolutionary history and ecological significance in Earth's ecosystems, using testate amoebae as a proxy.


Assuntos
Ecossistema , Fósseis , Processos Heterotróficos , Filogenia , Biodiversidade , Evolução Biológica , Amebozoários/genética , Amebozoários/classificação , Amoeba/genética , Amoeba/classificação , Amoeba/fisiologia , Eucariotos/genética , Eucariotos/classificação
2.
Int J Paleopathol ; 45: 46-54, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38657471

RESUMO

OBJECTIVE: To analyze the presence of protozoan parasites in bird coprolites from the Tremembé Formation (Oligocene of the Taubaté Basin). MATERIALS: Twenty avian coprolites embedded in pyrobituminous shale matrices. METHODS: Samples were rehydrated and subjected to spontaneous sedimentation. RESULTS: Paleoparasitological analyses revealed oocysts compatible with the Eimeriidae family (Apicomplexa) and one single Archamoebae (Amoebozoa) cyst. CONCLUSIONS: The present work increases the amount of information about the spread of infections throughout the Cenozoic Era and reveals that the Brazilian paleoavifauna played an important role in the Apicomplexa and Amoebozoa life cycles. SIGNIFICANCE: This is the first record of protozoans in avian coprolites from the Oligocene of Brazil. These findings can help in the interpretation of phylogenies of coccidian parasites of modern birds, as certain taxonomic characters observed in the Oligocene Protozoa characterize monophyletic groups in current molecular phylogenetic analyses. LIMITATIONS: None of the oocysts were sporulated; therefore, it is not possible to identify the morphotypes to genus or species. SUGGESTIONS FOR FURTHER RESEARCH: Our results create new perspectives related to biogeographic studies of the parasitic groups described and may improve the understanding of the temporal amplitude of parasitic evolutionary relationships between Protozoans and birds.


Assuntos
Aves , Brasil , Animais , Fósseis , Fezes/parasitologia , Amebozoários/genética , Filogenia , Apicomplexa/genética , Oocistos , Paleopatologia , Doenças das Aves/parasitologia , Doenças das Aves/história
3.
Eur J Protistol ; 91: 126013, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-37690315

RESUMO

Arcellinida is ascending in importance in protistology, but description of their diversity still presents multiple challenges. Furthermore, applicable tools for surveillance of these organisms are still in developing stages. Importantly, a good database that sets a correspondence between molecular barcodes and species morphology is lacking. Cytochrome oxidase (COI) has been suggested as the most relevant marker for species discrimination in Arcellinida. However, some major groups of Arcellinida are still lacking a COI sequence. Here we expand the database of COI marker sequences for Arcellinids, using single-cell PCR, transcriptomics, and database scavenging. In the present work, we added 24 new Arcellinida COI sequences to the database, covering all unsampled infra- and suborders. Additionally, we added six new SSUrRNA sequences and described four new species using morphological, morphometrical, and molecular evidence: Heleopera steppica, Centropyxis blatta, Arcella uspiensis, and Cylindrifflugia periurbana. This new database will provide a new starting point to address new research questions from shell evolution, biogeography, and systematics of arcellinids.


Assuntos
Amoeba , Amebozoários , Lobosea , Complexo IV da Cadeia de Transporte de Elétrons/genética , Filogenia
4.
Eur J Protistol ; 85: 125912, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-36027870

RESUMO

A strain with the characters of the genus Vannella was isolated from the water layer immediately above the deep-sea sediment collected in the south-western Atlantic Ocean, ca. 4.6 km deep. Small-subunit ribosomal RNA (SSU rRNA) and cytochrome c oxidase (Cox1) gene phylogenetic analyses showed that the new strain branches within the clade of previously isolated unnamed Vannella strains from different marine fish and invertebrate hosts. Although the SSU rRNA gene sequences of these strains show variability within 2% of all nucleotide positions without any regular pattern, the available Cox1 gene sequences from within this clade are identical. Given the morphological homogeneity of the revealed clade, all of its strains can be assigned under the same species name, and the variation of their SSU rRNA is comparable to its intragenomic variation, as shown by molecular cloning of the PCR amplicons. High variability of the SSU rRNA gene sequences within and between independently isolated morphologically identical strains in combination with highly conserved Cox1 gene sequences may be a feature in some clades of Vannella, but is not a general rule for this genus, as SSU rRNA genes conserved between different morphospecies occur in several other clades within Vannella.


Assuntos
Amebíase/veterinária , Amebozoários/isolamento & purificação , Doenças dos Peixes/virologia , Linguados/parasitologia , Amebíase/virologia , Amebozoários/classificação , Animais , Argentina , Oceano Atlântico , Complexo IV da Cadeia de Transporte de Elétrons/genética , Linguados/genética , Filogenia , RNA Ribossômico/genética , Água do Mar/parasitologia , Análise de Sequência de DNA , Espanha , Especificidade da Espécie
5.
Small GTPases ; 13(1): 100-113, 2022 01.
Artigo em Inglês | MEDLINE | ID: mdl-33779495

RESUMO

Rab GTPase is a paralog-rich gene family that controls the maintenance of the eukaryotic cell compartmentalization system. Diverse eukaryotes have varying numbers of Rab paralogs. Currently, little is known about the evolutionary pattern of Rab GTPase in most major eukaryotic 'supergroups'. Here, we present a comprehensive phylogenetic reconstruction of the Rab GTPase gene family in the eukaryotic 'supergroup' Amoebozoa, a diverse lineage represented by unicellular and multicellular organisms. We demonstrate that Amoebozoa conserved 20 of the 23 ancestral Rab GTPases predicted to be present in the last eukaryotic common ancestor and massively expanded several 'novel' in-paralogs. Due to these 'novel' in-paralogs, the Rab family composition dramatically varies between the members of Amoebozoa; as a consequence, 'supergroup'-based studies may significantly change our current understanding of the evolution and diversity of this gene family. The high diversity of the Rab GTPase gene family in Amoebozoa makes this 'supergroup' a key lineage to study and advance our knowledge of the evolution of Rab in Eukaryotes.


Assuntos
Amebozoários , Proteínas rab de Ligação ao GTP , Filogenia , Proteínas rab de Ligação ao GTP/genética , Proteínas rab de Ligação ao GTP/metabolismo , Evolução Molecular , Amebozoários/genética , Amebozoários/metabolismo , Eucariotos/metabolismo
6.
J Virol ; 93(14)2019 07 15.
Artigo em Inglês | MEDLINE | ID: mdl-31019058

RESUMO

Viruses depend on cells to replicate and can cause considerable damage to their hosts. However, hosts have developed a plethora of antiviral mechanisms to counterattack or prevent viral replication and to maintain homeostasis. Advantageous features are constantly being selected, affecting host-virus interactions and constituting a harsh race for supremacy in nature. Here, we describe a new antiviral mechanism unveiled by the interaction between a giant virus and its amoebal host. Faustovirus mariensis infects Vermamoeba vermiformis, a free-living amoeba, and induces cell lysis to disseminate into the environment. Once infected, the cells release a soluble factor that triggers the encystment of neighbor cells, preventing their infection. Remarkably, infected cells stimulated by the factor encyst and trap the viruses and viral factories inside cyst walls, which are no longer viable and cannot excyst. This unprecedented mechanism illustrates that a plethora of antiviral strategies remains to be discovered in nature.IMPORTANCE Understanding how viruses of microbes interact with its hosts is not only important from a basic scientific point of view but also for a better comprehension of the evolution of life. Studies involving large and giant viruses have revealed original and outstanding mechanisms concerning virus-host relationships. Here, we report a mechanism developed by Vermamoeba vermiformis, a free-living amoeba, to reduce Faustovirus mariensis dissemination. Once infected, V. vermiformis cells release a factor that induces the encystment of neighbor cells, preventing infection of further cells and/or trapping the viruses and viral factories inside the cyst walls. This phenomenon reinforces the need for more studies regarding large/giant viruses and their hosts.


Assuntos
Amebozoários/virologia , Vírus Gigantes/fisiologia , Replicação Viral/fisiologia , Vírus não Classificados/fisiologia
7.
Genome Biol Evol ; 10(11): 3118-3128, 2018 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-30380054

RESUMO

Sex and reproduction are often treated as a single phenomenon in animals and plants, as in these organisms reproduction implies mixis and meiosis. In contrast, sex and reproduction are independent biological phenomena that may or may not be linked in the majority of other eukaryotes. Current evidence supports a eukaryotic ancestor bearing a mating type system and meiosis, which is a process exclusive to eukaryotes. Even though sex is ancestral, the literature regarding life cycles of amoeboid lineages depicts them as asexual organisms. Why would loss of sex be common in amoebae, if it is rarely lost, if ever, in plants and animals, as well as in fungi? One way to approach the question of meiosis in the "asexuals" is to evaluate the patterns of occurrence of genes for the proteins involved in syngamy and meiosis. We have applied a comparative genomic approach to study the occurrence of the machinery for plasmogamy, karyogamy, and meiosis in Amoebozoa, a major amoeboid supergroup. Our results support a putative occurrence of syngamy and meiotic processes in all major amoebozoan lineages. We conclude that most amoebozoans may perform mixis, recombination, and ploidy reduction through canonical meiotic processes. The present evidence indicates the possibility of sexual cycles in many lineages traditionally held as asexual.


Assuntos
Amebozoários/genética , Genoma de Protozoário , Meiose , Genômica , Recombinação Genética , Sexo
8.
Microb Ecol ; 74(3): 681-690, 2017 10.
Artigo em Inglês | MEDLINE | ID: mdl-28389728

RESUMO

We investigated the role of leaf litter chemistry and richness in affecting testate amoeba communities of tropical rainforest in the Ecuadorian Andes. Litterbags containing leaf litter from four dominating tree species (Clusia sp., Myrcia pubescens, Graffenrieda emarginata, and Cecropia andina) with richness 1, 2, and 4 species were established and exposed in the field for 12 months at 2000 m a.s.l. Chemical elements and compounds of leaf litter were analyzed before exposure. At the end of exposure, microbial biomass and litter mass loss were measured, and living testate amoeba species number, density, biomass, and community composition were determined. In total, 125 testate amoeba species colonized the litter in litterbags. The results suggest that high litter nitrogen and low lignin concentrations are indicators of high litter quality for testate amoebae density and species richness. Their species number and density significantly declined in the order 1 > 4 > 2 leaf litter species and varied with leaf litter chemistry being at a maximum in high-quality single leaf litter species and low in low-quality leaf litter. Further, the addition of litter of high-quality to low-quality litter increased testate amoebae biomass and density; however, the values did not exceed the ones in single high-quality litter treatments. Moreover, the structure of testate amoeba communities varied with litter chemistry, with Fe, Na, lignin, and litter C-to-N ratio being of major importance, and indicating that litter chemistry reflects habitat quality for testate amoebae. Overall, the data show that leaf litter chemistry overrides leaf litter richness in structuring testate amoeba communities.


Assuntos
Amebozoários/fisiologia , Biota , Folhas de Planta/química , Floresta Úmida , Solo/química , Equador , Árvores/química
9.
Eur J Protistol ; 58: 175-186, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-28222945

RESUMO

Molecular phylogeny is an indispensable tool for assessing evolutionary relationships among protists. The most commonly used marker is the small subunit ribosomal RNA gene, a conserved gene present in many copies in the nuclear genomes. However, this marker is not variable enough at a fine-level taxonomic scale, and intra-genomic polymorphism has already been reported. Finding a marker that could be useful at both deep and fine taxonomic resolution levels seemed like a utopic dream. We designed Amoebozoa-specific primers to amplify a region including partial sequences of two subunits of the mitochondrial nicotinamide adenine dinucleotide dehydrogenase gene (NAD9/NAD7). We applied them to arcellinids belonging to distantly related genera (Arcella, Difflugia, Netzelia and Hyalosphenia) and to Arcellinid-rich environmental samples to obtain additional Amoebozoa sequences. Tree topology was congruent with previous phylogenies, all nodes being highly supported, suggesting that this marker is well-suited for deep phylogenies in Arcellinida and perhaps Amoebozoa. Furthermore, it enabled discrimination of close-related taxa. This short genetic marker (ca. 250bp) can therefore be used at different taxonomic levels, due to a fast-varying intergenic region presenting either a small intergenic sequence or an overlap, depending on the species.


Assuntos
Amebozoários/classificação , Amebozoários/genética , Código de Barras de DNA Taxonômico/normas , NADH Desidrogenase/genética , Filogenia , Amebozoários/enzimologia , Genes de Protozoários/genética , Marcadores Genéticos/genética , Especificidade da Espécie
10.
Eur J Protistol ; 58: 187-194, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-28073604

RESUMO

Testate amoebae are eukaryotic microorganisms characterized by the presence of an external shell (test). The shell morphology is used as a diagnostic character, but discordance between morphological and molecular data has been demonstrated in groups of arcellinids (Amoebozoa), one of the principal groups of testate amoebae. Morphology of the test is supposed to differentiate genera and species and it is applied in ecological, monitoring and paleontological studies. However, if phenotype does not reflect genotype, conclusions in these types of studies become severely impaired. The objective of this work is to evaluate the morphometrical and morphological variation of the closely related and morphologically similar taxa Arcella intermedia laevis Tsyganov and Mazei, 2006 and Arcella intermedia (Deflandre 1928) Tsyganov and Mazei, 2006 in nature and in cultured individuals and see how these are correlated with molecular data. Our results demonstrate that phenotypic plasticity in Arcella intermedia make morphological distinctions impossible in both taxa. Arcella intermedia and Arcella intermedia laevis are molecularly identical for SSU rDNA and a mitochondrial molecular marker (NAD9/7). We conclude that morphological techniques alone cannot identify phenotypic plasticity from natural populations. More work is clearly needed to better understand the morphological, morphometric and molecular variability in these organisms.


Assuntos
Amebozoários/citologia , Amebozoários/genética , Amebozoários/classificação , DNA de Protozoário/genética , NADH Desidrogenase/genética , Fenótipo , Filogenia , Especificidade da Espécie
11.
Proc Biol Sci ; 283(1840)2016 10 12.
Artigo em Inglês | MEDLINE | ID: mdl-27708147

RESUMO

Recombinase enzymes promote DNA repair by homologous recombination. The genes that encode them are ancestral to life, occurring in all known dominions: viruses, Eubacteria, Archaea and Eukaryota. Bacterial recombinases are also present in viruses and eukaryotic groups (supergroups), presumably via ancestral events of lateral gene transfer. The eukaryotic recA genes have two distinct origins (mitochondrial and plastidial), whose acquisition by eukaryotes was possible via primary (bacteria-eukaryote) and/or secondary (eukaryote-eukaryote) endosymbiotic gene transfers (EGTs). Here we present a comprehensive phylogenetic analysis of the recA genealogy, with substantially increased taxonomic sampling in the bacteria, viruses, eukaryotes and a special focus on the key eukaryotic supergroup Amoebozoa, earlier represented only by Dictyostelium We demonstrate that several major eukaryotic lineages have lost the bacterial recombinases (including Opisthokonta and Excavata), whereas others have retained them (Amoebozoa, Archaeplastida and the SAR-supergroups). When absent, the bacterial recA homologues may have been lost entirely (secondary loss of canonical mitochondria) or replaced by other eukaryotic recombinases. RecA proteins have a transit peptide for organellar import, where they act. The reconstruction of the RecA phylogeny with its EGT events presented here retells the intertwined evolutionary history of eukaryotes and bacteria, while further illuminating the events of endosymbiosis in eukaryotes by expanding the collection of widespread genes that provide insight to this deep history.


Assuntos
Proteínas de Bactérias/genética , Eucariotos/genética , Transferência Genética Horizontal , Recombinases Rec A/genética , Amebozoários/enzimologia , Amebozoários/genética , Dictyostelium/enzimologia , Dictyostelium/genética , Eucariotos/enzimologia , Evolução Molecular , Filogenia
12.
Acta Sci. Biol. Sci. ; 38(2): 229-240, abr. -jun. 2016. tab, ilus, graf
Artigo em Inglês | VETINDEX | ID: vti-15390

RESUMO

The pictorial key contributes to taxonomic analysis, as it lists the species found in a given environment, and points out the morphological characteristics that differs one specific taxon from the others. Arcellidae Ehrenberg, 1830 is one of the testate amoebae families with highest representativity in terms of richness and abundance, including three genera, that Arcella shows greater dispersion in different types of aquatic biotopes. The zooplankton community in the Paranoá Lake has been extensively studied over the decades. However, there are no studies on testate amoebae in this environment. The study aimed to develop a pictorial key to help in the identification of Arcella in the Paranoá Lake. Samples were taken with plankton net at 13 sites in the littoral zone of the lake. The elaboration of the key was based on morphological characteristics of the shell and pseudostoma of the individuals. There were identified 23 taxa, 16 species and seven subspecies. Two species with low incidence in Brazil were recorded (Arcella catinus and Arcella rota). The species richness was higher than the records published to date in Brazil, thus demonstrating the relevance of the data and the applicability of this pictorial key in other studies both in the Paranoá Lake, as in other regions.(AU)


A chave pictórica apresenta-se como uma ferramenta que contribui para análise taxonômica, pois além de apresentar uma listagem de espécies encontradas em determinado ambiente, pontua os caracteres morfológicos que difere um táxon específico dos demais. Arcellidae Ehrenberg, 1830 é considerada uma das famílias de amebas testáceas com maior representatividade em termos de riqueza e abundância, abrangendo três gêneros, dos quais, Arcella apresenta maior distribuição em diferentes tipos de biótopos aquáticos. O lago Paranoá tem sido foco de diversos trabalhos sobre a comunidade zooplanctônica. Entretanto, não há publicações com as amebas testáceas naquele ambiente. O presente estudo objetivou elaborar uma chave pictórica para auxiliar na identificação de Arcella para o lago Paranoá. Foram coletadas amostras em 13 pontos da região litorânea do lago, com rede de plâncton. A construção da chave baseou-se em características morfológicas da carapaça e do pseudostoma dos organismos. Foram identificados 23 táxons, 16 espécies e sete subespécies. Observou-se o registro de espécies com pouca incidência no Brasil (Arcella catinus e Arcella rota). A riqueza foi superior aos registros publicados até o momento para o Brasil, evidenciando, assim, a relevância dos dados encontrados e a aplicabilidade desta chave pictórica em outros estudos tanto no lago Paranoá, como em outras regiões.(AU)


Assuntos
Amebozoários/classificação , Amebozoários/crescimento & desenvolvimento , Lista de Checagem , Biodiversidade
13.
Eur J Protistol ; 51(5): 437-49, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-26355868

RESUMO

There has only been one study on the ecology of testate amoebae from Amazonian peatlands, despite Amazonia being a biodiversity hotspot of global importance. During analysis of litter samples from Aucayacu peatland, western (Peruvian) Amazonia, we discovered a testate amoeba with a distinct morphology unlike any other species reported previously. We describe a new species, Arcella peruviana, based on its distinct morphology, compare it to morphologically similar species and provide information about its ecology. This new species is characterised by a distinct cruciform aperture (diameter ranges between 12 and 17µm) which is slightly invaginated. The test is small (height 43-57µm) and polygonal in cross-section. Our discovery suggests the existence of an unknown diversity of testate amoebae in Amazonia. The absence of the new Arcella species in more intensively-sampled regions supports the view that protists have restricted distributions.


Assuntos
Amebozoários/classificação , Ecossistema , Amebozoários/citologia , Microscopia de Contraste de Fase , Peru , Especificidade da Espécie , Clima Tropical
14.
J Eukaryot Microbiol ; 62(4): 444-53, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25515047

RESUMO

The isolate American Type Culture Collection (ATCC)® 50979™ is a small amoebozoan whose actin gene was previously characterized, but did not allow a stable phylogenetic placement. This isolate was originally mis-identified upon deposition, and subsequently mis-illustrated in a recent publication. Here, we provide both a detailed morphological description as well as additional molecular analyses in order to clarify the isolate's phylogenetic relationships. The amoeba is minute (less than 5 µm), and presents the behavior of staying in a fixed location, while emitting one or two thin pseudopods. Transmission electron microscopy reveals that the cell is covered in a layer with embedded scales, giving the cell an armored appearance. Molecular phylogenetic analyses of data (actin, alpha- and beta-tubulin, elongation factor 2, and 14-3-3) from transcriptomes of this and four other isolates reveals that ATCC® 50979(™) is closely related to the recently described Squamamoeba japonica and in a novel, stable clade. Due to the unique nature of the scale covering, as well as other gross morphological characters and the molecular phylogenetic analyses, we formally describe the isolate as Sapocribrum chincoteaguense n. gen. n. sp.


Assuntos
Amebozoários/classificação , Amebozoários/genética , Amebozoários/citologia , Amebozoários/isolamento & purificação , Animais , DNA de Protozoário/genética , Perfilação da Expressão Gênica , Microscopia Eletrônica de Transmissão , Dados de Sequência Molecular , Filogenia , Pseudópodes , Análise de Sequência de DNA , Tubulina (Proteína)/genética
15.
Dis Aquat Organ ; 109(3): 241-50, 2014 Jul 03.
Artigo em Inglês | MEDLINE | ID: mdl-24991850

RESUMO

The impacts of oocyte parasites on the reproductive success of molluscs are largely unknown. In this study, we evaluated the presence of gonad parasites in 6 species of marine bivalve molluscs native to southern Brazil. Cultured bivalves included the mangrove oyster Crassostrea gasar (sometimes called C. brasiliana), the brown mussel Perna perna, the lion's paw scallop Nodipecten nodosus and the wing pearl oyster Pteria hirundo. Another species of mangrove oyster, C. rhizophorae, and the carib pointed venus clam Anomalocardia brasiliana (syn. A. flexuosa) were collected from the wild. Molluscs were collected in winter 2009 and summer 2010 for histopathological and molecular evaluation. An unknown ovarian parasite (UOP) was observed in histopathological sections of female gonads of C. gasar and C. rhizophorae. The UOP possessed features suggestive of amoebae, including an irregular outer membrane, frothy cytoplasm, a nucleus with a prominent central nucleolus and a closely associated basophilic parasome. PCR analysis was negative for Marteilioides chungmuensis, Perkinsus spp. and Paramoeba perurans. However, real-time PCR successfully amplified DNA from oyster gonads when using universal Paramoeba spp. primers. Also, conventional PCR amplified DNA using primers specific for Perkinsela amoebae-like organisms (syn. Perkinsiella), which are considered as endosymbionts of Parameoba spp., previously thought to be the parasome. Our results suggest that this UOP is a species of amoeba belonging to 1 of the 2 families of the order Dactylopodida, possibly related to Paramoeba spp. This study represents the first report of this type of organism in oysters. We found that C. gasar and C. rhizophorae were the most susceptible molluscs to these UOPs.


Assuntos
Amebozoários/isolamento & purificação , Crassostrea/parasitologia , Gônadas/parasitologia , Animais , Brasil , Interações Hospedeiro-Parasita
16.
Mol Biol Evol ; 30(4): 951-63, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23303306

RESUMO

Proteins containing repetitive amino acid domains are widespread in all life forms. In parasitic organisms, proteins containing repeats play important roles such as cell adhesion and invasion and immune evasion. Therefore, extracellular and intracellular parasites are expected to be under different selective pressures regarding the repetitive content in their genomes. Here, we investigated whether there is a bias in the repetitive content found in the predicted proteomes of 6 exclusively extracellular and 17 obligate intracellular protozoan parasites, as well as 4 free-living protists. We also attempted to correlate the results with the distinct ecological niches they occupy and with distinct protein functions. We found that intracellular parasites have higher repetitive content in their proteomes than do extracellular parasites and free-living protists. In intracellular parasites, these repetitive proteins are located mainly at the parasite surface or are secreted and are enriched in amino acids known to be part of N- and O-glycosylation sites. Furthermore, in intracellular parasites, the developmental stages that are able to invade host cells express a higher proportion of proteins with perfect repeats relative to other life cycle stages, and these proteins have molecular functions associated with cell invasion. In contrast, in extracellular parasites, degenerate repetitive motifs are enriched in proteins that are likely to play roles in evading host immune response. Altogether, our results support the hypothesis that both the ability to invade host cells and to escape the host immune response may have shaped the expansion and maintenance of perfect and degenerate repeats in the genomes of intra- and extracellular parasites.


Assuntos
Alveolados/genética , Amebozoários/genética , Diplomonadida/genética , Proteínas de Protozoários/genética , Trypanosomatina/genética , Alveolados/imunologia , Amebozoários/imunologia , Animais , Diplomonadida/imunologia , Interações Hospedeiro-Parasita , Humanos , Evasão da Resposta Imune/genética , Processamento de Proteína Pós-Traducional , Proteoma/química , Proteoma/genética , Proteoma/metabolismo , Proteínas de Protozoários/química , Proteínas de Protozoários/metabolismo , Sequências Repetitivas de Aminoácidos , Trypanosomatina/imunologia
18.
Exp Parasitol ; 126(1): 42-4, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20117108

RESUMO

Free-living amoebae are widely distributed in aquatic environments and their hygienic, medical and ecological relationships to man are increasingly important. The purpose of this study was to isolate free-living amoebae from water-hyacinth root (Eichhornia crassipes) and the water of an urban lake in Mexico City. Five grams of wet root were seeded on non-nutritive agar with Enterobacter aerogenes (NNE). Water samples were concentrated by centrifugation at 1200g for 15min and the pellet was seeded on NNE. Of the 16 isolated genera, 10 were detected in both habitats. The most frequent were Vannella in root and Acanthamoeba and Naegleria in water. The total number of isolates and genera isolated from root was higher than that isolated from water. The differences between root and water are probably due to the morphological characteristics of water-hyacinth root, which provides a large habitat and refuge area for many organisms.


Assuntos
Amebíase/etiologia , Amebozoários/isolamento & purificação , Eichhornia/parasitologia , Água Doce/parasitologia , Acanthamoeba/isolamento & purificação , Amebíase/transmissão , Amebozoários/classificação , Humanos , México , Naegleria/isolamento & purificação , Raízes de Plantas/parasitologia , Saúde da População Urbana
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