RESUMO

INTRODUCCIÓN: La detección de patrones de resistencia de Mycobacterium tuberculosis se basa en pruebas de susceptibilidad fenotípicas y genotípicas. Los resultados discordantes entre ellas son un desafío clínico para el manejo de pacientes con tuberculosis resistente a fármacos. OBJETIVO: Evaluar la concordancia entre pruebas fenotípicas y moleculares en pacientes con tuberculosis resistente a fármacos atendidos en una institución de Cali, Colombia. MATERIALES Y MÉTODOS: Se realizó un estudio transversal en el que se obtuvo el perfil de sensibilidad fenotípico de cultivos de micobacterias y la susceptibilidad genotípica con las pruebas moleculares Xpert-MTB/ RIF® o Genotype-MDRTBplus ®. Se evaluó el porcentaje de resistencia y porcentaje de acuerdo entre los resultados de las pruebas fenotípicas y genotípicas. Se estimó un coeficiente de kappa de Cohen (κ) para cada tipo de resistencia según la prueba utilizada. RESULTADOS: Se incluyeron 30 casos con resultados de pruebas genotípicas y fenotípicas. Las pruebas fenotípicas detectaron resistencia a fármacos de primera línea en 29/30 casos, mientras que las moleculares detectaron la resistencia en todos los casos evaluados. El porcentaje de resistencia a rifampicina detectado entre la prueba fenotípica y Genotype-MDRTBplus ® &e 61,5% (acuerdo global 41,1%, κ = 0,40, p = 0,96), mientras que el porcentaje de resistencia detectado con Xpert-MTB/RIF® fue 100% (acuerdo global 81,82%, κ: 0,00, p < 0,001) para este mismo medicamento. El porcentaje de resistencia a isoniacida detectado entre la prueba fenotípica y Genotype-MDRTBplus ® fue 94,4% (acuerdo global 89,47%, κ: -0,055 p = 0,59). CONCLUSIONES: La discordancia entre los resultados de las pruebas genotípicas y fenotípicas es posible, por lo que es importante usar e interpretar ambos tipos de pruebas de manera complementaria en el diagnóstico de la resistencia a fármacos de primera línea en la infección por M. tuberculosis.

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BACKGROUND: The detection of Mycobacterium tuberculosis resistance patterns is based on phenotypic and genotypic susceptibility tests. The discordant results between them are a clinical challenge for the management of patients with drug-resistant tuberculosis. Aim: To evaluate the concordance between phenotypic and molecular tests in patients with drug-resistant tuberculosis treated in an institution in Cali, Colombia. METHODS: A cross-sectional study was conducted. A phenotypic sensitivity profile was obtained from mycobacterial cultures. The genotypic susceptibility was obtained with Xpert-MTB/ RIF® or Genotype-MDRTBplus ®. The percentage of resistance and percentage of agreement between the results of the phenotypic and genotypic tests were evaluated. A Cohen's kappa coefficient (κ) was estimated for each type of resistance according to the test used. RESULTS: A total of 30 cases with both genotypic and phenotypic testing were included. The phenotypic tests detected resistance to first-line drugs in 29/30 cases, while the molecular tests detected resistance in all the cases evaluated. The percentage of resistance detected between Genotype-MDRTBplus® and the phenotypic test for rifampicin was 61.5% (overall agreement 41.1%, κ = 0.40, p = 0.96), while the percentage of resistance detected with XpertMTB/RIF® was 100% (overall agreement 81.82%, κ: 0.00, p < 0.001) for this same drug. Resistance to isoniazid detected by both types of tests was 94.4% (overall agreement 89.47%, κ: -0.055 p = 0.59). CONCLUSIONS: Discordance between the results of genotypic and phenotypic tests is possible, so it is important to use and interpret both types of tests in a complementary way in the diagnosis of resistance to first-line drugs in M. tuberculosis infection.

Assuntos

Humanos , Masculino , Feminino , Adulto , Tuberculose Resistente a Múltiplos Medicamentos/diagnóstico , Tuberculose Resistente a Múltiplos Medicamentos/genética , Fenótipo , Rifampina/farmacologia , Testes de Sensibilidade Microbiana , Estudos Transversais , Colômbia , Técnicas de Genotipagem , Isoniazida/farmacologia , Mycobacterium tuberculosis/efeitos dos fármacos

RESUMO

BACKGROUND: Fungal endocarditis is a low-frequency disease with a challenging diagnosis, as it can be mistaken with bacterial endocarditis. Fungal endocarditis causes higher mortality rates in immunocompromised patients. In the clinical practice, the endocarditis caused by fungi represents up to 10% of all infectious endocarditis cases and has a mortality rate of nearly 50%. CASE REPORT: Here we present the case of a 53-year-old woman under corticosteroid therapy with a history of rheumatic heart disease, aortic valve replacement, and rheumatoid arthritis, who presented with fungal endocarditis caused by Candida albicans. Even though the patient received 3 years of antifungal prophylaxis with fluconazole, had valve replacement surgery, and received intensive care, the patient finally worsened and died. CONCLUSIONS: Comorbidities and corticosteroid therapy predisposed the patient to acquire fungal endocarditis. This case highlights the importance of implementing procedures for the isolation and identification of fungi, and for carrying out antifungal-susceptibility testing, as well as establishing surveillance programs to identify infection-causing species and drug resistance patterns in hospitals. Moreover, designing and upgrading the algorithm for infectious endocarditis is the key to future improvements in diagnosis.

Assuntos

Candidíase , Endocardite , Micoses , Feminino , Humanos , Pessoa de Meia-Idade , Candida albicans , Antifúngicos/uso terapêutico , Candidíase/microbiologia , Fluconazol/uso terapêutico , Endocardite/diagnóstico , Endocardite/tratamento farmacológico , Endocardite/etiologia , Micoses/tratamento farmacológico , Corticosteroides

RESUMO

INTRODUCTION: Urinary tract infection is the second-leading reason for consults in primary health care. Bacterial urinary tract infections are the most common, of which Escherichia coli is the main etiologic agent. Antimicrobial resistance and multidrug resistance complicate effective community treatment, especially if resistance is caused by extended-spectrum beta-lactamase production. WHO recommends that antimicrobial susceptibility be evaluated in different regions of the world at different times. Community-acquired E. coli's susceptibility to colistin has not yet been studied in Cuba, and mcr-1 gene screening is necessary. OBJECTIVE: Evaluate community-acquired uropathogenic E. coli isolates' susceptibility to antibiotics, including colistin, and identify extended-spectrum beta-lactamase-producing bacteria. METHODS: We conducted a descriptive cross-sectional study that included 281 community-acquired uropathogenic E. coli isolates (153 from the Isle of Youth Special Municipality's Hygiene, Epidemiology, and Microbiology Center and 128 from Microbiology Laboratories of 7 institutions in Havana) from June 2016 through July 2018. We used the disk diffusion method to determine susceptibility to ampicillin, ampicillin/sulbactam, cefazolin, trimethoprim/sulfamethoxazole, ciprofloxacin, nitrofurantoin and fosfomycin. The disk elution method was used to determine susceptibility to colistin. The combined disk method was used to identify extended-spectrum beta-lactamases. Estimates were made regarding the frequency and percentages of antimicrobial susceptibility and resistance, as well as multidrug-resistance patterns. RESULTS: Of the 281 isolates, 68.3% (192/281) were resistant to ampicillin, 54.8% (154/281) were resistant to ciprofloxacin, and 49.5% (139/281) were resistant to trimethoprim/sulfamethoxazole. Resistance to colistin was not detected. On the other hand, 14.2% (40/281) were susceptible to the 8 antibiotics we evaluated, 22.1% (62/281) showed resistance to only 1 antibiotic, and 63.7% (179/281) were resistant to 2 or more antibiotics. In the extended-spectrum beta-lactamase determination, 34.5% (97/281) had inhibition zones ≤14 mm with cefazolin. Of those with inhibition zones, 64.9% (63/97) were positive in the phenotype test, and 35.1% (34/97) were negative. In extended-spectrum beta-lactamase-producing bacteria, 1.6% (1/63) were resistant to fosfomycin, and 3.2% (2/63) were resistant to nitrofurantoin. The most common multidrug-resistance pattern (22.9%; 30/131) was to ampicillin/sulbactam, ampicillin, cefazolin, ciprofloxacin, and trimethoprim/sulfamethoxazole. CONCLUSIONS: Uropathogenic E. coli resistance to the antibiotics most frequently used in community medical practice is quite common, and extended-spectrum beta-lactamase-producing bacteria is the mechanism for beta-lactam antibiotic resistance. Multidrug-resistance patterns include resistance to the antibiotics most used in community-acquired infections. Fosfomycin and nitrofurantoin are the most active in extended-spectrum beta-lactamase producing bacteria. All the isolates were susceptible to colistin.

Assuntos

Fosfomicina , Infecções Urinárias , Escherichia coli Uropatogênica , Ampicilina/uso terapêutico , Antibacterianos/farmacologia , Antibacterianos/uso terapêutico , Cefazolina/uso terapêutico , Ciprofloxacina/uso terapêutico , Colistina/farmacologia , Colistina/uso terapêutico , Estudos Transversais , Cuba , Proteínas de Escherichia coli , Fosfomicina/farmacologia , Fosfomicina/uso terapêutico , Humanos , Testes de Sensibilidade Microbiana , Nitrofurantoína/uso terapêutico , Sulbactam/uso terapêutico , Sulfametoxazol/uso terapêutico , Trimetoprima/uso terapêutico , Infecções Urinárias/tratamento farmacológico , Infecções Urinárias/epidemiologia , Infecções Urinárias/microbiologia , beta-Lactamases/uso terapêutico

RESUMO

We evaluated the performance of ceftazidime-avibactam and ceftolozane-tazobactam MicroScan Neg multidrug-resistant MIC 1 (NMR1) panel for clinical carbapenem-nonsusceptible Gram-negative bacilli isolates. We evaluated 212 clinically significant carbapenem-nonsusceptible Gram-negative bacilli (139 Pseudomonas aeruginosa and 73 KPC-producing Enterobacterales) from 71 Brazilian hospitals (2013 to 2020). Ceftazidime-avibactam and ceftolozane-tazobactam MICs from the panel were compared with a broth microdilution (BMD) test as the reference method. Essential agreement (EA) and categorical agreement (CA) were assessed. For P. aeruginosa, antimicrobial susceptibility testing error rates were calculated using the error-rate bound method. Discrepancies were initially observed with 11 isolates; 4 resolved after retesting, 2 in favor of the NMR1 and 2 in favor of the BMD method. The ceftazidime-avibactam EA (overall and evaluable) was 100% for P. aeruginosa and Enterobacterales. The CA was 100% for Enterobacterales and 98.6% for P. aeruginosa. The ceftolozane-tazobactam EA was 98.6% and 100% (overall and evaluable, respectively), and the CA was 96.4% for P. aeruginosa. For ceftazidime/avibactam, no very major error (VME) was found, and the major error (ME) rate was 4.2% (2/48). For ceftolozane-tazobactam and P. aeruginosa, using the CLSI breakpoints, the minor error (mE) was 11.4%, and no VME or ME was found. While using EUCAST breakpoints, the VME was 11.4% with no ME. The mE becomes ME or VME in the absence of the intermediate category. All categorical errors were also within 1 log of MIC variation, and the adjusted error rate for CLSI/EUCAST was 0% (0/212). The NMR1 panel is an option to test ceftazidime-avibactam for KPC-producing Enterobacterales and carbapenem-nonsusceptible P. aeruginosa. When a MIC of 4 mg/liter for ceftolozane-tazobactam is obtained using this method, an alert could be created, and the results could be confirmed by an alternative method.

Assuntos

Carbapenêmicos , Ceftazidima , Antibacterianos/farmacologia , Antibacterianos/uso terapêutico , Compostos Azabicíclicos , Ceftazidima/farmacologia , Cefalosporinas/farmacologia , Combinação de Medicamentos , Humanos , Testes de Sensibilidade Microbiana , Pseudomonas aeruginosa , Tazobactam/farmacologia

RESUMO

INTRODUCTION: The recalcitrant nature of patients with acute exacerbation of chronic rhinosinusitis (AECRS) potentially involves persisting colonization of the sinonasal mucosa by bacterial biofilms. Biofilms are known to be highly resistant to antibiotics, which may trigger or maintain chronic inflammation in the sinonasal mucosa. However, little is known about the relationship between the minimum inhibitory concentration (MIC) and antibiofilm concentrations of bacteria obtained from AECRS patients. MATERIAL AND METHODS: Thirty bacterial strains from 25 patients with AECRS were identified and underwent MIC determination (VITEK® 2). The planktonic isolates were submitted to an in vitro formation of biofilms (Modified Calgary Biofilm Device) and determination of minimum biofilm inhibitory concentration (MBIC) and minimum biofilm eradication concentration (MBEC) for amoxicillin, amoxicillin/clavulanic acid, clarithromycin, and levofloxacin. MIC of the planktonic forms was compared with MBIC and MBEC levels, according to the breakpoints established by the Clinical Laboratory Standards Institute guidelines. RESULTS: The main bacteria retrieved was S. aureus (60%), followed by other Gram-positive and Gram-negative bacteria in lower frequencies. 76.7% of strains formed biofilm in vitro (n=23/30). The planktonic isolates presented high rates of resistance for amoxicillin (82.6%) and clarithromycin (39.1%), and lower rates for amoxicillin/clavulanic acid (17.4%). The biofilm-forming bacteria counterparts presented higher levels of MBIC and MBEC compared to the MIC levels for amoxicillin, amoxicillin/clavulanic acid, and clarithromycin. Levofloxacin was highly effective against both planktonic and biofilm forms. Planktonic resistant forms were associated with levels of antibiofilm concentrations (MBIC and MBEC). CONCLUSIONS: Biofilm-forming bacteria from AECRS patients are prevalent, and biofilm forms are highly resistant to antibiotics compared to their planktonic counterparts. Antibiotic resistance observed in planktonic forms is a good indicator of biofilm resistance, although near 20% of susceptible planktonic bacteria can produce antibiotic tolerant biofilms.

Assuntos

Antibacterianos , Plâncton , Antibacterianos/farmacologia , Biofilmes , Resistência Microbiana a Medicamentos , Bactérias Gram-Negativas , Bactérias Gram-Positivas , Humanos , Testes de Sensibilidade Microbiana , Staphylococcus aureus

RESUMO

Aim: To evaluate an assay to detect minimum bactericidal concentration (MBC) in Mycobacterium tuberculosis, using as single model rifampicin, isoniazid, levofloxacin (LVX) and linezolid (LNZ) and in combination. Material & methods: MBCs were carried out directly from resazurin microtiter assay plate and 3D checkerboard in M. tuberculosis H37Rv and five resistant clinical isolates. Results: The proposed MBC assay showed similar values to those determined by MGIT™, used as control. LVX and LNZ's MBC values were close to their MIC values. LNZ or LVX combined with isoniazid and rifampicin showed MBC value reduced in 63.7% of the assays. Conclusion: The proposed assay to determine MBCs of drugs can be applied to the study of new compounds with anti-M. tuberculosis activity to detect their bactericidal effect and also in laboratory routine for clinical dose adjustment of drugs according to the patient's profile.

Assuntos

Antituberculosos/farmacologia , Mycobacterium tuberculosis/efeitos dos fármacos , Tuberculose/tratamento farmacológico , Farmacorresistência Bacteriana Múltipla , Sinergismo Farmacológico , Humanos , Isoniazida/farmacologia , Levofloxacino/farmacologia , Linezolida/farmacologia , Testes de Sensibilidade Microbiana , Rifampina/farmacologia

RESUMO

Antimicrobial resistance (AMR) is a major public health threat of global proportions, which has the potential to lead to approximately ten million deaths per year by 2050. Pressured by this wicked problem, in 2014, the World Health Organization launched a call for member states to share AMR data through the implementation of the Global Antimicrobial Resistance Surveillance System (GLASS), to appropriately scale and monitor the general situation world-widely. In 2017, Brazil joined GLASS and, in 2018, started its own national antimicrobial surveillance program (BR-GLASS) to understand the impact of resistance in the country. We compiled data obtained from the complete routine of three hospitals' microbiology labs during the year of 2018. This pilot data sums up to 200,874 antimicrobial susceptibility test results from 11,347 isolates. It represents 119 different microorganisms recovered from 44 distinct types of clinical samples. Specimens came from patients originating from 301 Brazilian cities, with 4,950 of these isolates from presumed Healthcare-Associated Infections (HAIs) and the other 6,397 community-acquired cases. The female population offered 58% of the collected samples, while the other 42% were of male origin. The urinary tract was the most common topography (6,372/11,347 isolates), followed by blood samples (2,072/11,347). Gram-negative predominated the bacterial isolates: Escherichia coli was the most prevalent in general, representing 4,030 isolates (89.0% of these from the urinary tract). Coagulase-negative Staphylococci were the most prevalent bacteria in blood samples. Besides these two species, the ESKAPE group have consolidated their prevalence. Regarding drug susceptibility results, 141,648 (70.5%) were susceptible, 9,950 (4.9%) intermediate, and 49,276 (24.5%) resistant. Acinetobacter baumannii was the most worrisome microorganism, with 65.3% of the overall antimicrobial susceptibility tests showing resistance, followed by ESBL-producing Klebsiella pneumoniae, with a global resistance rate of 59%. Although this is a pilot project (still limited to one state), this database shows the importance of a nation-wide surveillance program,[153mm][-12mm] Q14 especially considering it already had patients coming from 301 distinct counties and 18 different states. The BR-GLASS Program is an ongoing project that intends to encompass at least 95 hospitals distributed in all five geographical regions in Brazil within the next 5 years.

Assuntos

Antibacterianos , Anti-Infecciosos , Antibacterianos/farmacologia , Brasil/epidemiologia , Farmacorresistência Bacteriana , Feminino , Humanos , Masculino , Projetos Piloto

RESUMO

The present study proposes a discussion about the use of breakpoints when plant derivatives are used for investigating potential agents against Mycobacterium tuberculosis strains. A systematic review on these aspects was performed and supported that an arbitrary breakpoint may be considered inadequate in this kind of study. In addition, we propose that the adoption of this limiter should be done from the toxicity value found using the same plant derivative.

Assuntos

Antituberculosos/farmacologia , Descoberta de Drogas/métodos , Testes de Sensibilidade Microbiana/métodos , Mycobacterium tuberculosis/efeitos dos fármacos , Extratos Vegetais/farmacologia , Antituberculosos/administração & dosagem , Relação Dose-Resposta a Droga , Farmacorresistência Bacteriana , Humanos , Fitoterapia/métodos , Extratos Vegetais/administração & dosagem

RESUMO

BACKGROUND: Pythium insidiosum is the etiological agent of pythiosis, an emerging life-threatening infectious disease in tropical and subtropical regions. The pathogen is a fungus-like organism resistant to antifungal therapy, for this reason, most cases need extensive surgical debridments as treatment, but depending on the size and anatomical region of the lesion, such approach is unfeasible. We investigate the fungicidal effect and toxicity of crude bark extract of Stryphnodendron adstringens and commercially available tannin on Pythium insidiosum both in vitro and in vivo. METHODS: Standardized fragments of mycelia of fifteen isolates of P. insidiosum were tested with different concentrations of bark extract (10 to 30% v/v) and tannin (0.5, 1.0 and 1.5 mg/mL). For in vivo study, fifteen rabbits were experimentally infected with zoospores of P. insidiosum and treated by oral and intralesional applications of bark extract and tannin. Acute toxicity tests with both substances were also performed in rats. RESULTS: In vitro studies showed fungicidal effect for both substances at different concentrations and the SEM showed alteration on the cell wall surface of the pathogen. All infected rabbits developed a firm nodular mass that reached around 90 mm2 ninety days after inoculation, but neither the intralesional inoculation of tannin, nor the oral administration of crude extract and tannin were able to promote remission of the lesions. CONCLUSIONS: Lesions developed by rabbits presented an encapsulated abscess being quite different of naturally acquired pythiosis, which is characterized by ulcerated lesions. Since no toxicity was observed in rats or rabbits inoculated with these products, while in vitro experiments showed direct antifungal effect, therapeutic activity of S. adstringens and tannin should be clinically tested as an alternative for healing wounds in naturally acquired pythiosis.

Assuntos

Antifúngicos/farmacologia , Fabaceae/química , Micélio/efeitos dos fármacos , Pitiose/tratamento farmacológico , Pythium/efeitos dos fármacos , Taninos/farmacologia , Administração Oral , Animais , Modelos Animais de Doenças , Relação Dose-Resposta a Droga , Humanos , Injeções Intralesionais , Masculino , Micélio/crescimento & desenvolvimento , Micélio/ultraestrutura , Casca de Planta/química , Extratos Vegetais/química , Pitiose/microbiologia , Pitiose/patologia , Pythium/crescimento & desenvolvimento , Pythium/ultraestrutura , Coelhos , Ratos , Ratos Wistar

RESUMO

ABSTRACT INTRODUCTION: Vulvovaginal candidiasis is a prevalent opportunistic mucosal infection, caused predominantly by Candida albicans. Candida species vary in their susceptibility to the antifungal agents, thus, the susceptibility tests have clinical significance in determining the appropriate therapeutic choice. OBJECTIVE: To investigate the distribution of vulvovaginal yeasts and the susceptibility pattern to azoles antifungal isolated in southern Mato Grosso State, Brazil. MATERIAL AND METHODS: Clinical samples from 166 patients were obtained regardless signs and symptoms of vulvovaginal candidiasis. Vaginal swabs were collected, seeded onto plates containing Sabouraud Dextrose agar and incubated at 35ºC, for five days. A pool of colonies that grown on each plate was subcultured in CHROMagar Candida medium. On the basis of a pure culture, the yeasts were identified using traditional phenotypic identification methods. Susceptibility tests for antifungal fluconazole and ketoconazole were performed using the broth microdilution method according to the reference protocol M27A3 of the Clinical Laboratory Standards Institute (CLSI). RESULTS: The frequency of Candida spp. in the study population was 30%, of which 28% were in the group of asymptomatic women and 35% among symptomatic. Among the isolated strains were C. albicans (50%), C. glabrata (33%) and C. tropicalis (17%). The minimum inhibitory concentration (MIC) for fluconazole ranged from 0.5 μg/ml to 16 μg/ml and for ketoconazole from 0.03 μg/ml to 4 μg/ml. The resistance rates were 1.7% for fluconazole and 3.4% for ketoconazole. CONCLUSION: C. albicans was the predominant species. We observed a high susceptibility of Candida spp. to fluconazole and ketoconazole antifungal.

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RESUMO INTRODUÇÃO: A candidíase vulvovaginal é uma prevalente infeccção mucosa oportunista, causada predominantemente por Candida albicans. As espéceis de Candida variam de acordo com a suscetibilidade aos agentes antifúngicos, assim os testes de sensibilidade têm importância clínica para uma adequada escolha terapêutica. OBJETIVO: Investigar a distribuição de leveduras vulvovaginais e o padrão de suscetibilidade a antifúngicos azólicos em isolados do sul de Mato Grosso. MATERIAL E MÉTODOS: Foram obtidas amostras clínicas de 166 pacientes, independentemente de sinais e sintomas para candidíase vulvovaginal. Swabs vaginais foram coletados, semeados em placas contendo ágar Sabouraud e incubados a 35ºC. Uma amostra das colônias que cresceram em cada placa foi subcultivada em meio CHROMagar Candida. Partindo de uma cultura pura, as leveduras foram identificadas por métodos fenotípicos clássicos. Os testes de suscetibilidade aos antifúngicos cetoconazol e fluconazol foram realizados, usando o método de microdiluição de acordo com o protocolo de referência M27A3 do Clinical Laboratory Standards Institute (CLSI). RESULTADOS: A frequência de Candida spp. na população em estudo foi de 30%, sendo 28% no grupo de mulheres assintomáticas e 35% entre as sintomáticas. As espécies isoladas foram C. albicans (50%), C. glabrata (33%) e C. tropicalis (17%). A concentração inibitória mínima (CIM) para o fluconazol variou de 0,5 μg/ml a 16 μg/ml e para o cetoconazol, de 0,03 μg/ml a 4 μg/ml. A frequência de resistência ao fluconazol foi de 1,7% e ao cetoconazol, de 3,4%. CONCLUSÃO: C. albicans foi a espécie predominante. Observamos elevada sensibilidade de Candida spp. aos antifúngicos fluconazol e cetoconazol.

RESUMO

The naturally high minimum inhibitory concentration exhibited by echinocandins against Candida parapsilosis has been known since the first introduction of these antifungal agents. Despite this awareness, clinical failures have not been reported; consequently, the resistance of C. parapsilosis to echinocandins remains unexplored. We exposed 30 isolates of C. parapsilosis to echinocandins (caspofungin, micafungin, and anidulafungin) in vitro and studied the effects of this exposure. After 60 exposures, 80, 67, and 60 % of the isolates changed from susceptible to non-susceptible to caspofungin, micafungin, and anidulafungin, respectively. In addition, four strains exhibited cross-resistance to all three echinocandins. Based on the M27-A3 (CLSI, 2008) and M27-S4 (CLSI, 2012) techniques, the susceptibility of the resistant strains to other antifungal agents was assayed. All of the tested echinocandin-resistant strains were susceptible to amphotericin B, and the resistance rate to fluconazole, voriconazole, and flucytosine was 73.3, 43.3, and 20 %, respectively. The exposure of C. parapsilosis to the three echinocandins generated cross-resistant strains and an unexpected in vitro resistance to azoles and flucytosine.

Assuntos

Antifúngicos/farmacologia , Candida/efeitos dos fármacos , Equinocandinas/farmacologia , Azóis/farmacologia , Candidíase/microbiologia , Farmacorresistência Fúngica , Humanos , Testes de Sensibilidade Microbiana

RESUMO

Tuberculosis (TB) is still considered a major global public health problem in the world and there is a concern about the worldwide increase of drug-resistance (DR). This paper describes the analysis of three Mycobacterium tuberculosis isolates from a single patient collected over a long treatment period of time. DR was initially investigated through phenotypic testing, followed by line probe assays (LPAs) and whole genome sequencing (WGS). It presents an intriguing situation where a multidrug-resistant (MDR-) TB case was diagnosed and treated based only on late phenotypic drug susceptibility testing of isolate 1. During the treatment, another two isolates were cultivated: isolate 2, nine months after starting MDR-TB treatment; and isolate 3, cultivated five months later, during regular use of anti-TB drugs. These two isolates were evaluated using molecular LPA and WGS, retrospectively. All mutations detected by LPA were also detected in the WGS, including conversion from fluoroquinolones susceptibility to resistance from isolate 2 to isolate 3. WGS showed additional mutations, including some which may confer resistance to other drugs not tested (terizidone/cycloserine) and mutations with no correspondent resistance in drug susceptibility testing (streptomycin and second-line injectable drugs).

Assuntos

Antituberculosos/farmacologia , Antituberculosos/uso terapêutico , Resistência a Medicamentos , Tuberculose Extensivamente Resistente a Medicamentos/genética , Mycobacterium tuberculosis/genética , Proteínas de Bactérias/genética , Tuberculose Extensivamente Resistente a Medicamentos/microbiologia , Humanos , Mycobacterium tuberculosis/efeitos dos fármacos , Fatores de Tempo

RESUMO

Introducción: la candidemia es una enfermedad grave, con elevada morbi-mortalidad y cuyo tratamientono siempre conduce a la cura. La distribución de especies de Candida y la sensibilidad antifúngica varía según el área geográfica, incluso entre centros de salud de una misma región. Objetivo:establecer la distribución de especies de Candida y su sensibilidad in vitro frente a diferentes antifúngicos. Materiales y métodos: se realizó un estudio descriptivo, prospectivo y transversal entre noviembre de 2013 y mayo de 2014 de casos de candidemias en una institución de salud de Valledupar,Colombia. Las Concentraciones Inhibitorias Mínimas (CIM) se determinaron según el protocolo estándar M27-A3-S4. Resultados: Se estudiaron 40 aislados clínicos de Candida spp. obtenidos de sangre (97,5%) y médula ósea (2,5%). Del total, 15 (37,5%) fueron caracterizados como Candida tropicalis, 13 (32,5%) del Complejo Candida albicans, cinco (12,5%) del Complejo Candida glabrata, tres (7,5%) como Candida guilliermondii, tres (7,5%) del Complejo Candida parapsilosis y uno (2,5%) como Candida krusei. No se observó resistencia a la anfotericina B ni al voriconazol en ninguno de los aislados, pero sí al fluconazol en uno (6,6%) de Candida tropicalis y uno (33,3%) del Complejo Candida parapsilosis y a la caspofungina en el aislado de Candida krusei y en uno (20%) del Complejo Candida glabrata...

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Introduction: candidemia is a serious disease with high morbidity and mortality whose treatment does not always lead to a cure. Candida species distribution and antifungal susceptibility varies by geographic area, even in health centers in a given region. Objective: To establish Candida species distributionand in vitro susceptibility to different antifungal agents. Material and methods: A descriptive, prospective, and cross-sectional study of candidemia cases was performed at a health institution in Valledupar, Colombia between November 2013 and May 2014. The Minimum Inhibitory Concentrations(MIC) were determined following the M27-A3-S4 standard protocol. Results: 40 isolates of Candida spp. obtained from blood (97.5%) and bone marrow (2.5%) were analyzed. Candida tropicalis, 15 (37.5%), Candida albicans Complex, 13 (32.5%), Candida glabrata Complex, five (12.5%), Candida guilliermondii, three (7.5%), Candida parapsilosis Complex 3 (7.5%) and Candida krusei, one (2.5%) were isolated. No resistance of isolates to amphotericin B and voriconazole was observed; in contrast, one (6.6%) isolate of Candida tropicalis and one (33.3%) of Candida parapsilosisComplex showed resistance to fluconazole and a single isolate of Candida krusei and one (20%) of Candida glabrata Complex to caspofungin...

Assuntos

Humanos , Antifúngicos , Candida , Candidemia , Testes de Sensibilidade Microbiana

RESUMO

Acinetobacter baumannii ha emergido como una bacteria de gran importancia clínica. Esta bacteria ha sido relacionada con altos porcentajes de mortalidad y posee una alta capacidad para diseminarse en el ambiente hospitalario. Con el paso del tiempo, Acinetobacter baumannii ha adquirido diferentes mecanismos de resistencia a los antibióticos y en la actualidad se reporta resistencia a carbapenémicos, aminoglicósidos, quinolonas y polimixinas, lo que ha complicado el manejo de las infecciones ocasionadas por esta bacteria. El problema se agrava aún más con las limitaciones en el diagnóstico y la carencia de métodos fenotípicos estandarizados que permitan detectar los mecanismos de resistencia específicos. En Colombia se han descrito altos porcentajes de resistencia a los carbapenémicos, lo que ha limitado las opciones terapéuticas y hace necesario el conocimiento de la epidemiología local para establecer medidas de control más certeras.

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Currently Acinetobacter baumannii has become in a microorganisms of great clinical importance. It has an extraordinary capacity to spread in the hospital environment and it has been associated with high mortality rates. Acinetobacter baumannii has acquired different resistance mechanisms to antibiotics with reports resistance to carbapenems, aminoglycosides, quinolones and polymyxins; which has complicated the therapy of the infections caused for this pathogen. The problem is further due to the limitations in the diagnosis and the lack of standardized phenotypic methods to detect specific resistance mechanisms. In Colombia has reported high percentages of resistance to carbapenems, which has reduced therapeutic options. The knowledge of local epidemiology is necessary for establish more assertive control measures.

RESUMO

El Complejo Fusarium solani (CFS) se encuentra distribuido en la naturaleza, causando un amplio espectro de infecciones en los humanos, desde superficiales, como la queratitis, hasta infecciones fúngicas invasoras, caracterizándose por su resistencia a los antimicóticos. El objetivo de esta investigación fue determinar la susceptibilidad in vitro del CFS frente a cinco antifúngicos. Se utilizaron 30 aislados obtenidos de úlceras corneales provenientes de la colección de cultivos del Departamento de Micología del Instituto Nacional de Higiene “Rafael Rangel” y se siguió el protocolo descrito en el documento M38-A2 del Instituto de Estándares Clínicos y de Laboratorio (CLSI), determinando las Concentraciones Mínimas Inhibitorias (CMI) por microdilución en caldo para anfotericina B, itraconazol, posaconazol, voriconazol y fluconazol. En general, todas las drogas presentaron CMI elevadas, siendo voriconazol y anfotericina B los antifúngicos que exhibieron mejor actividad, mientras que itraconazol, posaconazol y fluconazol mostraron actividad nula. Los resultados de este estudio aportaron información importante sobre el comportamiento del CFS frente a los antifúngicos de uso común en la práctica clínica por primera vez en Venezuela. Es imprescindible que el médico conozca la actividad de estas drogas para poder tomar decisiones y orientar una conducta terapéutica adecuada.

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The Fusarium solani Complex (FSC) is distributed in nature, producing a wide spectrum of infections in humans, from superficial ones such as keratitis, to invasive fungal infections, characterized by their resistance to antimycotics. The purpose of this investigation was to determine the in vitro susceptibility of the FSC to five antifungals. We used 30 isolates obtained from corneal ulcers kept at the culture collection of the Instituto Nacional de Higiene “Rafael Rangel” and we followed the protocol described in the M38-A2 document of the Clinical and Laboratory Standards Institute (CLSI) determining the Minimal Inhibitory Concentrations (MIC) by broth microdilution for amphotericin B, itraconazole, posaconazole, voriconazole and fluconazole. In general, all the drugs presented high MICs, voriconazole and amphotericin B being the antifungals which showed the best activity, while itraconazole, posaconazole and fluconazole showed a null activity. The results of this study provided, for the first time in Venezuela, important information about the behavior of the FSC towards commonly used antifungals. It is mandatory that physicians know the activity of these drugs in order to be able to take decisions and devise an guide an appropriate therapeutic management.

RESUMO

OBJECTIVES: To evaluate in vitro interactions between paromomycin sulphate and the antileishmanial drugs meglumine antimoniate, amphotericin B, miltefosine and azithromycin against intracellular Leishmania (Leishmania) infantum chagasi, Leishmania (Viannia) braziliensis and Leishmania (Leishmania) amazonensis amastigotes in peritoneal mouse macrophages. METHODS: First, drug susceptibility was assessed in 3, 5 and 7 day assays, followed by drug interaction assays with a modified fixed-ratio method. An overall mean sum fractional inhibitory concentration (∑FIC) was calculated for each combination and each Leishmania species. The nature of the interactions was classified as synergistic if the mean ∑FIC was ≤ 0.5, indifferent if the mean ∑FIC was >0.5-4.0 and antagonistic if the mean ∑FIC was >4.0. RESULTS: In vitro synergism was observed for the combinations of paromomycin plus miltefosine [at 50% and 90% inhibitory concentrations (IC50 and IC90, respectively)] and paromomycin plus amphotericin B (at the IC90 level) against L. (L.) amazonensis, paromomycin plus meglumine antimoniate (at the IC50 and IC90 levels) and paromomycin plus amphotericin B (at the IC50 level) against L. (V.) braziliensis, and paromomycin plus miltefosine, paromomycin plus amphotericin B (both at the IC90 level) and paromomycin plus azithromycin (at the IC50 level) against L. (L) infantum chagasi. CONCLUSIONS: This work provides a preclinical dataset that supports future studies on multidrug treatment schedules against New World leishmaniasis.

Assuntos

Antiprotozoários/farmacologia , Sinergismo Farmacológico , Leishmania braziliensis/efeitos dos fármacos , Leishmania infantum/efeitos dos fármacos , Leishmania mexicana/efeitos dos fármacos , Paromomicina/farmacologia , Animais , Células Cultivadas , Concentração Inibidora 50 , Macrófagos/parasitologia , Camundongos , Testes de Sensibilidade Parasitária

RESUMO

El objetivo de este trabajo fue validar la preparación del inóculo por densitometría para las pruebas de susceptibilidad a los antifúngicos en especies del género Fusarium. Se emplearon 15 aislamientos clínicos de Fusarium spp. para preparar los inóculos por espectrofotometría y contaje de unidades formadoras de colonias en cámara de Neubauer, siguiendo los protocolos establecidos por los documentos de referencia M38-A2 del Instituto de Estándares Clínicos y de Laboratorio (CLSI) y E.DEF 9.1 del Comité Europeo para Pruebas de Susceptibilidad a los Antimicrobianos (EUCAST), respectivamente. En paralelo se determinaron las lecturas por densitometría para ambos procedimientos. Se estableció un rango de 0,5-0,7 unidades McFarland para la preparación del inóculo por densitometría según el CLSI, y un rango de 0,2-0,8 unidades McFarland para la metodología descrita por el EUCAST. Con este estudio, se logró validar la preparación del inóculo para las pruebas de susceptibilidad en Fusarium spp., utilizando la densitometría como método alternativo de los procedimientos descritos internacionalmente, con considerables ventajas para ser implementado en los laboratorios de microbiología clínica. La variabilidad en cuanto a la capacidad de esporulación y tamaño de las conidias, sobre todo en especies poco frecuentes de Fusarium, sugiere la necesidad de validar el inóculo por especie.

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The purpose of this work was to validate the preparation of the inoculum by densitometry for antifungal susceptibility testing in Fusarium species. Fifteen clinical isolates of Fusarium spp. were used to prepare the inocula by spectrophotometry and counting of colony forming units in a Neubauer chamber, according to the protocols established by the reference documents M38-A2 of the Clinical and Laboratory Standards Institute (CLSI), and E.DEF 9.1 of the European Committee on Antimicrobial Susceptibility Testing (EUCAST), respectively. Densitometry readings were determined in parallel for both procedures. A range of 0.5-0.7 McFarland units was established for inocula preparation by densitometry according to the CLSI, and a range of 0.2-0.8 McFarland units was established for the methodology described by EUCAST. This study allowed validating the preparation of the inocula for antifungal susceptibility testing in Fusarium spp., using densitometry as an alternative method for other procedures described internationally, with considerable advantages that can be implemented at clinical microbiology laboratories. The variability regarding sporulation capacity and conidia size, especially in less frequent Fusarium species, suggests the need of validating inocula per species.

RESUMO

The CLSI M100-S19 document has recommended the disuse of vancomycin disks for staphylococci and informed that studies on the action of teicoplanin in disk-diffusion testing should be performed. We describe the comparison of two methods, disk diffusion and broth microdilution, for determining teicoplanin susceptibility in clinical isolates of staphylococci. Overall results showed an aggregation rate of 96.8 percent; Staphylococcus aureus showed total agreement while S. epidermidis showed 93.8 percent of agreement. According to these local results, disk diffusion can still be employed to teicoplanin susceptibility determination for staphylococci in our institution.

Assuntos

Humanos , Técnicas e Procedimentos Diagnósticos , Suscetibilidade a Doenças , Resistência Microbiana a Medicamentos , Infecções Estafilocócicas , Staphylococcus aureus/isolamento & purificação , Staphylococcus epidermidis/isolamento & purificação , Teicoplanina/análise , Teicoplanina/isolamento & purificação , Métodos , Pacientes Ambulatoriais , Métodos

RESUMO

The CLSI M100-S19 document has recommended the disuse of vancomycin disks for staphylococci and informed that studies on the action of teicoplanin in disk-diffusion testing should be performed. We describe the comparison of two methods, disk diffusion and broth microdilution, for determining teicoplanin susceptibility in clinical isolates of staphylococci. Overall results showed an aggregation rate of 96.8%; Staphylococcus aureus showed total agreement while S. epidermidis showed 93.8% of agreement. According to these local results, disk diffusion can still be employed to teicoplanin susceptibility determination for staphylococci in our institution.

RESUMO

The CLSI M100-S19 document has recommended the disuse of vancomycin disks for staphylococci and informed that studies on the action of teicoplanin in disk-diffusion testing should be performed. We describe the comparison of two methods, disk diffusion and broth microdilution, for determining teicoplanin susceptibility in clinical isolates of staphylococci. Overall results showed an aggregation rate of 96.8%; Staphylococcus aureus showed total agreement while S. epidermidis showed 93.8% of agreement. According to these local results, disk diffusion can still be employed to teicoplanin susceptibility determination for staphylococci in our institution.