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1.
Appl Biochem Biotechnol ; 193(11): 3704-3718, 2021 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-34363139

RESUMO

In recent years, stem cell therapy has shown promise in regenerative medicine. The lack of standardized protocols for cell isolation and differentiation generates conflicting results in this field. Mesenchymal stem cells derived from adipose tissue (ASC) and fibroblasts (FIB) share very similar cell membrane markers. In this context, the distinction of mesenchymal stem cells from fibroblasts has been crucial for safe clinical application of these cells. In the present study, we developed aptamers capable of specifically recognize ASC using the Cell-SELEX technique. We tested the affinity of ASC aptamers compared to dermal FIB. Quantitative PCR was advantageous for the in vitro validation of four candidate aptamers. The binding capabilities of Apta 2 and Apta 42 could not distinguish both cell types. At the same time, Apta 21 and Apta 99 showed a better binding capacity to ASC with dissociation constants (Kd) of 50.46 ± 2.28 nM and 72.71 ± 10.3 nM, respectively. However, Apta 21 showed a Kd of 86.78 ± 9.14 nM when incubated with FIB. Therefore, only Apta 99 showed specificity to detect ASC by total internal reflection microscopy (TIRF). This aptamer is a promising tool for the in vitro identification of ASC. These results will help understand the differences between these two cell types for more specific and precise cell therapies.


Assuntos
Tecido Adiposo/metabolismo , Aptâmeros de Nucleotídeos/farmacologia , Diferenciação Celular/efeitos dos fármacos , Fibroblastos/metabolismo , Células-Tronco Mesenquimais/metabolismo , Tecido Adiposo/citologia , Aptâmeros de Nucleotídeos/química , Células Cultivadas , Fibroblastos/citologia , Humanos , Células-Tronco Mesenquimais/citologia
2.
J Microbiol Methods ; 169: 105814, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-31866379

RESUMO

Phosphonates are organic phosphorous (P) compounds frequently detected in the environment due to a very stable CP bond that render them relatively recalcitrant. Glyphosate [N-phosphonomethyl glycine] is the most widely used and best-known synthetic phosphonate, and one of the most concerning herbicides in the world today. Microbial degradation of glyphosate and organophosphonates in general, is the main dissipation mechanism operating in most environments. One microbial metabolic pathway in this process is the CP lyase pathway, entailing an enzymatic complex encoded by about 14 genes (the Phn operon). Our goal was to develop a quantitative polymerase chain reaction (qPCR) assay for a key enzyme, the CP lyase that breaks down the CP bond, via quantification of the codifying phnJ gene. The primers designed in this study fulfill the requirements for a successful qPCR assay, with high efficiency and sensitivity, as well as specific detection of the target sequence in a wide range of taxonomic groups. This is, to our knowledge, the first report of primers designed to target phnJ in both pure cultures and metagenomic DNA from different environmental sources. Direct quantification of phnJ may be a cost-effective proxy to determine glyphosate degradation potential in different matrixes.


Assuntos
Biodegradação Ambiental , Primers do DNA/genética , Glicina/análogos & derivados , Herbicidas/metabolismo , Liases/genética , Organofosfonatos/metabolismo , Sequência de Bases , Glicina/metabolismo , Liases/análise , Reação em Cadeia da Polimerase em Tempo Real/métodos , Análise de Sequência de DNA , Glifosato
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