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1.
J Phys Condens Matter ; 34(49)2022 Oct 26.
Artigo em Inglês | MEDLINE | ID: mdl-36228604

RESUMO

A revised study of the growth and melting of crystals in congruently melting Al50Ni50alloy is carried out by molecular dynamics (MDs) and phase field (PF) methods. An embedded atom method (EAM) potential of Purja Pun and Mishin (2009Phil. Mag.89 3245) is used to estimate the material's properties (density, enthalpy, and self-diffusion) of the B2 crystalline and liquid phases of the alloy. Using the same EAM potential, the melting temperature, density, and diffusion coefficient become well comparable with experimental data in contrast with previous works where other potentials were used. In the new revision of MD data, the kinetics of melting and solidification are quantitatively evaluated by the 'crystal-liquid interface velocity-undercooling' relationship exhibiting the well-known bell-shaped kinetic curve. The traveling wave solution of the kinetic PF model as well as the hodograph equation of the solid-liquid interface quantitatively describe the 'velocity-undercooling' relationship obtained in the MD simulation in the whole range of investigated temperatures for melting and growth of Al50Ni50crystals.

2.
Polymers (Basel) ; 14(10)2022 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-35631850

RESUMO

Methyl isobutyl carbinol (MIBC) is a high-performance surfactant with unusual interfacial properties much appreciated in industrial applications, particularly in mineral flotation. In this study, the structure of air-liquid interfaces of aqueous solutions of MIBC-NaCl is determined by using molecular dynamics simulations employing polarizable and nonpolarizable force fields. Density profiles at the interfaces and surface tension for a wide range of MIBC concentrations reveal the key role of polarizability in determining the surface solvation of Cl- ions and the expulsion of non-polarizable Na+ ions from the interface to the liquid bulk, in agreement with spectroscopic experiments. The orientation of MIBC molecules at the water liquid-vapor interface changes as the concentration of MIBC increases, from parallel to the interface to perpendicular, leading to a well-packed monolayer. Surface tension curves of fresh water and aqueous NaCl solutions in the presence of MIBC intersect at a reproducible surfactant concentration for a wide range of salt concentrations. The simulation results for a 1 M NaCl aqueous solution with polarizable water and ions closely capture the MIBC concentration at the intercept. The increase in surface tension of the aqueous MIBC/NaCl mixture below the concentration of MIBC at the intersection seems to originate in a disturbance of the interfacial hydrogen bonding structure of the surface liquid water caused by Na+ ions acting at a distance and not by its presence on the interface.

3.
Molecules ; 26(6)2021 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-33805628

RESUMO

Doxorubicin (DOX), a recognized anticancer drug, forms stable associations with carbon nanotubes (CNTs). CNTs when properly functionalized have the ability to anchor directly in cancerous tumors where the release of the drug occurs thanks to the tumor slightly acidic pH. Herein, we study the armchair and zigzag CNTs with Stone-Wales (SW) defects to rank their ability to encapsulate DOX by determining the DOX-CNT binding free energies using the MM/PBSA and MM/GBSA methods implemented in AMBER16. We investigate also the chiral CNTs with haeckelite defects. Each haeckelite defect consists of a pair of square and octagonal rings. The armchair and zigzag CNT with SW defects and chiral nanotubes with haeckelite defects predict DOX-CNT interactions that depend on the length of the nanotube, the number of present defects and nitrogen doping. Chiral nanotubes having two haeckelite defects reveal a clear dependence on the nitrogen content with DOX-CNT interaction forces decreasing in the order 0N > 4N > 8N. These results contribute to a further understanding of drug-nanotube interactions and to the design of new drug delivery systems based on CNTs.


Assuntos
Antineoplásicos/administração & dosagem , Doxorrubicina/administração & dosagem , Portadores de Fármacos/administração & dosagem , Sistemas de Liberação de Medicamentos , Nanotubos de Carbono/química , Antineoplásicos/química , Simulação por Computador , Doxorrubicina/química , Portadores de Fármacos/química , Composição de Medicamentos/métodos , Humanos , Simulação de Dinâmica Molecular , Estrutura Molecular , Nanotecnologia , Nanotubos de Carbono/ultraestrutura
4.
Molecules ; 24(23)2019 Nov 24.
Artigo em Inglês | MEDLINE | ID: mdl-31771295

RESUMO

Carbon nanotubes (CNTs) are valuable drug carriers since when properly functionalized they transport drugs and anchor directly to cancerous tumors whose more acidic pH causes the drug release. Herein, we study the so-called zigzag and armchair CNTs with haeckelite defects to rank their ability to adsorb doxorubicin (DOX) by determining the DOX-CNT binding free energies using the MM/PBSA and MM/GBSA methods implemented in AMBER. Our results reveal stronger DOX-CNT interactions for encapsulation of the drug inside the nanotube compared to its adsorption onto the defective nanotube external surface. Armchair CNTs with one and two defects exhibit better results compared with those with four and fifteen defects. Each haeckelite defect consists of a pair of square and octagonal rings. DOX-CNT binding free energies are predicted to be dependent on: (i) nanotube chirality and diameter, (ii) the number of defects, (iii) nitrogen doping and (iv) the position of the encapsulated DOX inside the nanotube. Armchair (10,10) nanotubes with two haeckelite defects, doped with nitrogen, exhibit the best drug-nanotube binding free energies compared with zigzag and fully hydrogenated nanotubes and, also previously reported ones with bumpy defects. These results contribute to further understanding drug-nanotube interactions and their potential application to the design of new drug delivery systems.


Assuntos
Doxorrubicina/química , Nanotubos de Carbono/química , Nitrogênio/química , Adsorção , Cápsulas , Portadores de Fármacos/química , Conformação Molecular , Simulação de Dinâmica Molecular , Tamanho da Partícula
5.
Phys Chem Chem Phys ; 18(16): 11176-83, 2016 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-27049515

RESUMO

Molecular dynamics simulation of a nanoscale capillary water bridge between two planar substrates is used to determine the resulting force between the substrates without arbitrariness regarding geometry and location of the free surface of the bridge. The substrates are moderately hydrophilic. The force changes continuously as the separation between the substrates changes except for small gaps where it becomes discontinuous because the bridge is unable to adopt stable configurations at any distance apart. Further exploration of the bridge and the force as the substrates approach each other reveals an underlying oscillatory force with an increasing repulsive component at separation distances equivalent to few water molecules. According to the average number of hydrogen bonds per water molecule (HBN), at very small gap sizes, water molecules which are very close to the surfaces are unable to maximize HBN thus contributing to the repulsive force. Our simulation results of force versus gap size agree with calculations based on other methods, some very different, and also reproduce the typical magnitude of the experimental force. Finally, a macroscopic force balance correctly describes the force-distance curve except for bridges constituted of water layers only.

6.
J Colloid Interface Sci ; 426: 145-51, 2014 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-24863777

RESUMO

Molecular dynamics simulations are used to study capillary liquid bridges between two planar substrates and the origin, strength and range of the resulting force between them. Pairwise interactions are described by the Lennard-Jones potential. Surface wettability is tuned by varying the fluid-substrate well depth interaction parameter. The force between the substrates due to a bridge of liquid is estimated by different methods including non-equilibrium simulations of moving substrates connected by liquid bridges and macroscopic balance of forces. The latter involves knowledge of liquid-vapor interfacial free energy, curvature radii, radius of wetted area and contact angle at the triple-phase contact line. All these physical quantities are estimated from equilibrium simulations. The force is attractive when the substrates are solvophilic or moderately solvophobic; and thus for cavities surrounded by the same liquid the force is attractive even when the substrates are moderately solvophilic. Two threshold values for the fluid-substrate potential interaction parameter can be identified; one for which the effective interaction between substrates due to liquid bridges changes from repulsive to attractive and another for which the capillary bridge becomes mechanically unstable and breaks into droplets.

7.
J Mol Graph Model ; 38: 389-95, 2012 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23085180

RESUMO

Algorithms for generating defective carbon nanotubes have been developed and implemented in software. The algorithms were designed to create arrays of carbon atoms that form layers and interconnect. The parameters for construction were the following: Hamada indices that respond to topology (armchair, zigzag or chiral nanotubes) and diameter, the saturated or unsaturated nature of the nanotube, the length and, most importantly, the presence of defects that can be built individually or repetitively by rotating bonds, removing atoms, or adding additional carbon atoms. The output was written in a standard, exportable file format that contained atomic coordinates useful for further computational chemistry work.


Assuntos
Algoritmos , Nanotubos de Carbono/química , Software , Modelos Químicos
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