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1.
Sensors (Basel) ; 23(5)2023 Feb 24.
Artigo em Inglês | MEDLINE | ID: mdl-36904731

RESUMO

The causes of ventricular fibrillation (VF) are not yet elucidated, and it has been proposed that different mechanisms might exist. Moreover, conventional analysis methods do not seem to provide time or frequency domain features that allow for recognition of different VF patterns in electrode-recorded biopotentials. The present work aims to determine whether low-dimensional latent spaces could exhibit discriminative features for different mechanisms or conditions during VF episodes. For this purpose, manifold learning using autoencoder neural networks was analyzed based on surface ECG recordings. The recordings covered the onset of the VF episode as well as the next 6 min, and comprised an experimental database based on an animal model with five situations, including control, drug intervention (amiodarone, diltiazem, and flecainide), and autonomic nervous system blockade. The results show that latent spaces from unsupervised and supervised learning schemes yielded moderate though quite noticeable separability among the different types of VF according to their type or intervention. In particular, unsupervised schemes reached a multi-class classification accuracy of 66%, while supervised schemes improved the separability of the generated latent spaces, providing a classification accuracy of up to 74%. Thus, we conclude that manifold learning schemes can provide a valuable tool for studying different types of VF while working in low-dimensional latent spaces, as the machine-learning generated features exhibit separability among different VF types. This study confirms that latent variables are better VF descriptors than conventional time or domain features, making this technique useful in current VF research on elucidation of the underlying VF mechanisms.


Assuntos
Eletrocardiografia , Fibrilação Ventricular , Animais , Eletrocardiografia/métodos , Redes Neurais de Computação
2.
PLoS One ; 16(6): e0253027, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34111201

RESUMO

Fast and accurate taxonomic identification of invasive trans-located ladybird beetle species is essential to prevent significant impacts on biological communities, ecosystem functions, and agricultural business economics. Therefore, in this work we propose a two-step automatic detector for ladybird beetles in random environment images as the first stage towards an automated classification system. First, an image processing module composed of a saliency map representation, simple linear iterative clustering superpixels segmentation, and active contour methods allowed us to generate bounding boxes with possible ladybird beetles locations within an image. Subsequently, a deep convolutional neural network-based classifier selects only the bounding boxes with ladybird beetles as the final output. This method was validated on a 2, 300 ladybird beetle image data set from Ecuador and Colombia obtained from the iNaturalist project. The proposed approach achieved an accuracy score of 92% and an area under the receiver operating characteristic curve of 0.977 for the bounding box generation and classification tasks. These successful results enable the proposed detector as a valuable tool for helping specialists in the ladybird beetle detection problem.


Assuntos
Besouros/classificação , Reconhecimento Automatizado de Padrão/métodos , Algoritmos , Animais , Colômbia , Aprendizado Profundo , Equador , Espécies Introduzidas , Redes Neurais de Computação
3.
Front Physiol ; 12: 653013, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33995122

RESUMO

Electrocardiographic imaging (ECGI) is a technique to reconstruct non-invasively the electrical activity on the heart surface from body-surface potential recordings and geometric information of the torso and the heart. ECGI has shown scientific and clinical value when used to characterize and treat both atrial and ventricular arrhythmias. Regarding atrial fibrillation (AF), the characterization of the electrical propagation and the underlying substrate favoring AF is inherently more challenging than for ventricular arrhythmias, due to the progressive and heterogeneous nature of the disease and its manifestation, the small volume and wall thickness of the atria, and the relatively large role of microstructural abnormalities in AF. At the same time, ECGI has the advantage over other mapping technologies of allowing a global characterization of atrial electrical activity at every atrial beat and non-invasively. However, since ECGI is time-consuming and costly and the use of electrical mapping to guide AF ablation is still not fully established, the clinical value of ECGI for AF is still under assessment. Nonetheless, AF is known to be the manifestation of a complex interaction between electrical and structural abnormalities and therefore, true electro-anatomical-structural imaging may elucidate important key factors of AF development, progression, and treatment. Therefore, it is paramount to identify which clinical questions could be successfully addressed by ECGI when it comes to AF characterization and treatment, and which questions may be beyond its technical limitations. In this manuscript we review the questions that researchers have tried to address on the use of ECGI for AF characterization and treatment guidance (for example, localization of AF triggers and sustaining mechanisms), and we discuss the technological requirements and validation. We address experimental and clinical results, limitations, and future challenges for fruitful application of ECGI for AF understanding and management. We pay attention to existing techniques and clinical application, to computer models and (animal or human) experiments, to challenges of methodological and clinical validation. The overall objective of the study is to provide a consensus on valuable directions that ECGI research may take to provide future improvements in AF characterization and treatment guidance.

4.
PLoS One ; 15(11): e0241798, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33147271

RESUMO

Fast and accurate identification of biting midges is crucial in the study of Culicoides-borne diseases. In this work, we propose a two-stage method for automatically analyzing Culicoides (Diptera: Ceratopogonidae) species. First, an image preprocessing task composed of median and Wiener filters followed by equalization and morphological operations is used to improve the quality of the wing image in order to allow an adequate segmentation of particles of interest. Then, the segmentation of the zones of interest inside the biting midge wing is made using the watershed transform. The proposed method is able to produce optimal feature vectors that help to identify Culicoides species. A database containing wing images of C. obsoletus, C. pusillus, C. foxi, and C. insignis species was used to test its performance. Feature relevance analysis indicated that the mean of hydraulic radius and eccentricity were relevant for the decision boundary between C. obsoletus and C. pusillus species. In contrast, the number of particles and the mean of the hydraulic radius was relevant for deciding between C. foxi and C. insignis species. Meanwhile, for distinguishing among the four species, the number of particles and zones, and the mean of circularity were the most relevant features. The linear discriminant analysis classifier was the best model for the three experimental classification scenarios previously described, achieving averaged areas under the receiver operating characteristic curve of 0.98, 0.90, and 0.96, respectively.


Assuntos
Ceratopogonidae/classificação , Asas de Animais/anatomia & histologia , Animais , Área Sob a Curva , Automação , Teorema de Bayes , Bases de Dados Factuais , Análise Discriminante , Feminino , Processamento de Imagem Assistida por Computador , Curva ROC , Máquina de Vetores de Suporte
5.
Sensors (Basel) ; 20(15)2020 Jul 27.
Artigo em Inglês | MEDLINE | ID: mdl-32726931

RESUMO

Ventricular fibrillation (VF) signals are characterized by highly volatile and erratic electrical impulses, the analysis of which is difficult given the complex behavior of the heart rhythms in the left (LV) and right ventricles (RV), as sometimes shown in intracardiac recorded Electrograms (EGM). However, there are few studies that analyze VF in humans according to the simultaneous behavior of heart signals in the two ventricles. The objective of this work was to perform a spectral and a non-linear analysis of the recordings of 22 patients with Congestive Heart Failure (CHF) and clinical indication for a cardiac resynchronization device, simultaneously obtained in LV and RV during induced VF in patients with a Biventricular Implantable Cardioverter Defibrillator (BICD) Contak Renewal IVTM (Boston Sci.). The Fourier Transform was used to identify the spectral content of the first six seconds of signals recorded in the RV and LV simultaneously. In addition, measurements that were based on Information Theory were scrutinized, including Entropy and Mutual Information. The results showed that in most patients the spectral envelopes of the EGM sources of RV and LV were complex, different, and with several frequency peaks. In addition, the Dominant Frequency (DF) in the LV was higher than in the RV, while the Organization Index (OI) had the opposite trend. The entropy measurements were more regular in the RV than in the LV, thus supporting the spectral findings. We can conclude that basic stochastic processing techniques should be scrutinized with caution and from basic to elaborated techniques, but they can provide us with useful information on the biosignals from both ventricles during VF.


Assuntos
Fibrilação Ventricular , Arritmias Cardíacas , Desfibriladores Implantáveis , Eletrocardiografia , Técnicas Eletrofisiológicas Cardíacas , Insuficiência Cardíaca , Ventrículos do Coração , Humanos , Fibrilação Ventricular/diagnóstico
6.
Sensors (Basel) ; 18(8)2018 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-30081559

RESUMO

In recent years, attention has been paid to wireless sensor networks (WSNs) applied to precision agriculture. However, few studies have compared the technologies of different communication standards in terms of topology and energy efficiency. This paper presents the design and implementation of the hardware and software of three WSNs with different technologies and topologies of wireless communication for tomato greenhouses in the Andean region of Ecuador, as well as the comparative study of the performance of each of them. Two companion papers describe the study of the dynamics of the energy consumption and of the monitored variables. Three WSNs were deployed, two of them with the IEEE 802.15.4 standard with star and mesh topologies (ZigBee and DigiMesh, respectively), and a third with the IEEE 802.11 standard with access point topology (WiFi). The measured variables were selected after investigation of the climatic conditions required for efficient tomato growth. The measurements for each variable could be displayed in real time using either a laboratory virtual instrument engineering workbench (LabVIEWTM) interface or an Android mobile application. The comparative study of the three networks made evident that the configuration of the DigiMesh network is the most complex for adding new nodes, due to its mesh topology. However, DigiMesh maintains the bit rate and prevents data loss by the location of the nodes as a function of crop height. It has been also shown that the WiFi network has better stability with larger precision in its measurements.

7.
Sensors (Basel) ; 18(8)2018 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-30081565

RESUMO

Tomato greenhouses are a crucial element in the Equadorian economy. Wireless sensor networks (WSNs) have received much attention in recent years in specialized applications such as precision farming. The energy consumption in WSNs is relevant nowadays for their adequate operation, and attention is being paid to analyzing the affecting factors, energy optimization techniques working on the network hardware or software, and characterizing the consumption in the nodes (especially in the ZigBee standard). However, limited information exists on the analysis of the consumption dynamics in each node, across different network technologies and communication topologies, or on the incidence of data transmission speed. The present study aims to provide a detailed analysis of the dynamics of the energy consumption for tomato greenhouse monitoring in Ecuador, in three types of WSNs, namely, ZigBee with star topology, ZigBee with mesh topology (referred to here as DigiMesh), and WiFi with access point topology. The networks were installed and maintained in operation with a line of sight between nodes and a 2-m length, whereas the energy consumption measurements of each node were acquired and stored in the laboratory. Each experiment was repeated ten times, and consumption measurements were taken every ten milliseconds at a rate of fifty thousand samples for each realization. The dynamics were scrutinized by analyzing the recorded time series using stochastic-process analysis methods, including amplitude probability functions and temporal autocorrelation, as well as bootstrap resampling techniques and representations of various embodiments with the so-called M-mode plots. Our results show that the energy consumption of each network strongly depends on the type of sensors installed in the nodes and on the network topology. Specifically, the CO2 sensor has the highest power consumption because its chemical composition requires preheating to start logging measurements. The ZigBee network is more efficient in energy saving independently of the transmission rate, since the communication modules have lower average consumption in data transmission, in contrast to the DigiMesh network, whose consumption is high due to its topology. Results also show that the average energy consumption in WiFi networks is the highest, given that the coordinator node is a Meshlium™ router with larger energy demand. The transmission duration in the ZigBee network is lower than in the other two networks. In conclusion, the ZigBee network with star topology is the most energy-suitable one when designing wireless monitoring systems in greenhouses. The proposed methodology for consumption dynamics analysis in tomato greenhouse WSNs can be applied to other scenarios where the practical choice of an energy-efficient network is necessary due to energy constrains in the sensor and coordinator nodes.

8.
Sensors (Basel) ; 18(8)2018 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-30081567

RESUMO

World population growth currently brings unequal access to food, whereas crop yields are not increasing at a similar rate, so that future food demand could be unmet. Many recent research works address the use of optimization techniques and technological resources on precision agriculture, especially in large demand crops, including climatic variables monitoring using wireless sensor networks (WSNs). However, few studies have focused on analyzing the dynamics of the environmental measurement properties in greenhouses. In the two companion papers, we describe the design and implementation of three WSNs with different technologies and topologies further scrutinizing their comparative performance, and a detailed analysis of their energy consumption dynamics is also presented, both considering tomato greenhouses in the Andean region of Ecuador. The three WSNs use ZigBee with star topology, ZigBee with mesh topology (referred to here as DigiMesh), and WiFi with access point topology. The present study provides a systematic and detailed analysis of the environmental measurement dynamics from multiparametric monitoring in Ecuadorian tomato greenhouses. A set of monitored variables (including CO2, air temperature, and wind direction, among others) are first analyzed in terms of their intrinsic variability and their short-term (circadian) rhythmometric behavior. Then, their cross-information is scrutinized in terms of scatter representations and mutual information analysis. Based on Bland⁻Altman diagrams, good quality rhythmometric models were obtained at high-rate sampling signals during four days when using moderate regularization and preprocessing filtering with 100-coefficient order. Accordingly, and especially for the adjustment of fast transition variables, it is appropriate to use high sampling rates and then to filter the signal to discriminate against false peaks and noise. In addition, for variables with similar behavior, a longer period of data acquisition is required for the adequate processing, which makes more precise the long-term modeling of the environmental signals.

9.
Sensors (Basel) ; 18(5)2018 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-29724033

RESUMO

The intracardiac electrical activation maps are commonly used as a guide in the ablation of cardiac arrhythmias. The use of catheters with force sensors has been proposed in order to know if the electrode is in contact with the tissue during the registration of intracardiac electrograms (EGM). Although threshold criteria on force signals are often used to determine the catheter contact, this may be a limited criterion due to the complexity of the heart dynamics and cardiac vorticity. The present paper is devoted to determining the criteria and force signal profiles that guarantee the contact of the electrode with the tissue. In this study, we analyzed 1391 force signals and their associated EGM recorded during 2 and 8 s, respectively, in 17 patients (82 ± 60 points per patient). We aimed to establish a contact pattern by first visually examining and classifying the signals, according to their likely-contact joint profile and following the suggestions from experts in the doubtful cases. First, we used Principal Component Analysis to scrutinize the force signal dynamics by analyzing the main eigen-directions, first globally and then grouped according to the certainty of their tissue-catheter contact. Second, we used two different linear classifiers (Fisher discriminant and support vector machines) to identify the most relevant components of the previous signal models. We obtained three main types of eigenvectors, namely, pulsatile relevant, non-pulsatile relevant, and irrelevant components. The classifiers reached a moderate to sufficient discrimination capacity (areas under the curve between 0.84 and 0.95 depending on the contact certainty and on the classifier), which allowed us to analyze the relevant properties in the force signals. We conclude that the catheter-tissue contact profiles in force recordings are complex and do not depend only on the signal intensity being above a threshold at a single time instant, but also on time pulsatility and trends. These findings pave the way towards a subsystem which can be included in current intracardiac navigation systems assisted by force contact sensors, and it can provide the clinician with an estimate of the reliability on the tissue-catheter contact in the point-by-point EGM acquisition procedure.


Assuntos
Arritmias Cardíacas/terapia , Ablação por Cateter/métodos , Técnicas Eletrofisiológicas Cardíacas/normas , Humanos , Reprodutibilidade dos Testes
10.
Sensors (Basel) ; 17(10)2017 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-29035333

RESUMO

Pollution on water resources is usually analyzed with monitoring campaigns, which consist of programmed sampling, measurement, and recording of the most representative water quality parameters. These campaign measurements yields a non-uniform spatio-temporal sampled data structure to characterize complex dynamics phenomena. In this work, we propose an enhanced statistical interpolation method to provide water quality managers with statistically interpolated representations of spatial-temporal dynamics. Specifically, our proposal makes efficient use of the a priori available information of the quality parameter measurements through Support Vector Regression (SVR) based on Mercer's kernels. The methods are benchmarked against previously proposed methods in three segments of the Machángara River and one segment of the San Pedro River in Ecuador, and their different dynamics are shown by statistically interpolated spatial-temporal maps. The best interpolation performance in terms of mean absolute error was the SVR with Mercer's kernel given by either the Mahalanobis spatial-temporal covariance matrix or by the bivariate estimated autocorrelation function. In particular, the autocorrelation kernel provides with significant improvement of the estimation quality, consistently for all the six water quality variables, which points out the relevance of including a priori knowledge of the problem.

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