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1.
Proteins ; 57(2): 392-9, 2004 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-15340926

RESUMO

Changes induced by mutations in rhodopsin that are associated with the degenerative visual disease retinitis pigmentosa result in an altered pattern of light absorption according to quantum mechanical simulations and reference experimental works. Eleven single-point mutations associated with retinitis pigmentosa at and in the proximity to the retinal binding pocket of rhodopsin have been modeled in silico and their spectra calculated with the NDOL (Neglect of Differential Overlap accounting L azimuthal quantum number) a priori method. The altered pattern of absorption found would lead to cumulative consequences in energy dissipation with aging. Different energy balances in the case of mutants at the very molecular level, compared to native nonmutated rhodopsin, can cause permanent cellular stress and would play a role in the progression of the retine degenerative process. It could explain the worsening of the pathological condition mostly in adults and suggests the probable beneficial effects of using quenching drugs and protection devices against excess of light in the early stages of life for avoiding or reducing potential damage.


Assuntos
Absorção/fisiologia , Luz , Modelos Estruturais , Mutação Puntual/fisiologia , Retina/patologia , Retinose Pigmentar/genética , Rodopsina/química , Rodopsina/genética , Sequência de Aminoácidos , Biologia Computacional/métodos , Humanos , Isomerismo , Dados de Sequência Molecular , Valor Preditivo dos Testes , Retinaldeído/química , Análise Espectral/métodos , Raios Ultravioleta
2.
J Comput Chem ; 25(3): 429-38, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-14696077

RESUMO

The present work explores the effect of substitution in all free positions of furfural on conformational preferences of formyl group by using ab-initio calculations at the MP2/6-31G(p,d) level of theory. Theoretical modeling was made in vacuo. The selected substituents were -CH(3), NH(2), NO(2) and F groups in 3, 4, 5 and ipso carbonyl positions. Geometries of all derivatives were analyzed and it is ascertained that substitution has not important consequences on furan ring geometry. Differences of energy between OO-cis and trans conformers and energy barriers between them are described and extreme cases are explained. Interesting features appear in the cases of -NH(2) and -NO(2) groups, and particularly when the 3 and ipso carbonyl positions are substituted. Variations in energy barriers are correlated with variations in C2-C6 distances for the transition states and planar forms. Substitution effect on Mülliken charges are analyzed and related with internal rotation energy barriers and differences between conformers.

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