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1.
Animal ; 14(S2): s341-s347, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32624080

RESUMO

The description of the growth of the Japanese quails is necessary to characterize the genetic potential of these birds raised in different countries. Thus, the aim of this study was to describe the genetic potential of Japanese quails by conducting a meta-analysis considering studies conducted in different countries. Only data about the subspecies Coturnix coturnix japonica were considered; studies regarding Coturnix coturnix coturnix were not examined. The criteria investigated were BW (W), age (t), year of publication and location of the study. Each set of genetic material within a publication was coded as one study. The Gompertz function was used to interpret the growth of laying quails; thus, each study was represented by Gompertz parameters. The W and t data were applied to estimate the values of Gompertz growth parameters, including BW at maturity (Wm), BW at birth (Wi), maturity rate (B) and inflection point (IP). The age at which the maximum growth rate was achieved (t*) was calculated considering the parameters Wm, Wi and B. To estimate these parameters, random regression was used to randomize the parameter Wm. The parameters estimated for each assay were used in exploratory, grouping, and principal component analyses. The values of Wi ranged from 4.1 to 11.6 g. The values of B ranged from 0.0393 to 0.1039/day, and consequently, the values of t* and IP ranged from 14 to 31 days and 9.21 to 31.03 g, respectively. These results show that there is considerable variability in the growth potential of Japanese quails. To better understand this variation, two groups were examined: Brazil and other countries, according to the grouping of Wi, Wm, B and t*; parameter B was the variable that presented the highest specificity, indicating that both groups modified the maturity rate. For the principal component analysis, the year of publication showed a relationship with the growth parameters but only for studies performed in Brazil. For studies carried out in other countries, the changes in growth parameters were not related to the year of publication. In Brazilian studies, there was a decrease in the maturity rate, but the weight at maturity was higher. Therefore, it appears that different strategies of genetic selection were adopted in Brazil compared to other countries.


Assuntos
Coturnix , Codorniz , Animais , Peso Corporal , Brasil , Coturnix/genética
2.
J Dairy Sci ; 102(2): 1761-1767, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30594374

RESUMO

The aim of this study was to elucidate the differential gene expression in the RNA sequencing transcriptome of isolated perfused udders collected from 4 slaughtered Holstein × Zebu crossbred dairy cows experimentally inoculated with Streptococcus agalactiae. We studied 3 different statistical tools (edgeR, baySeq, and Cuffdiff 2). In summary, 2 quarters of each udder were experimentally inoculated with Strep. agalactiae and the other 2 were used as a control. Mammary tissue biopsies were collected at times 0 and 3 h after infection. The total RNA was extracted and sequenced on an Illumina HiSeq 2000 (Illumina Inc., San Diego, CA). Transcripts were assembled from the reads aligned to the bovine UMD 3.1 reference genome, and the statistical analyses were performed using the previously mentioned tools (edgeR, baySeq, and Cuffdiff 2). Finally, the identified genes were submitted to pathway enrichment analysis. A total of 1,756, 1,161, and 3,389 genes with differential gene expression were identified when using edgeR, baySeq, and Cuffdiff 2, respectively. A total of 122 genes were identified by the overlapping of the 3 methods; however, only the platelet activation presented a significantly enriched pathway. From the results, we suggest the FCER1G, GNAI2, ORAI1, and VASP genes shared among the 3 methods in this pathway for posterior biological validation.


Assuntos
Glândulas Mamárias Animais/microbiologia , Mastite Bovina/genética , RNA/genética , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/fisiologia , Animais , Bovinos , Feminino , Genoma , Glândulas Mamárias Animais/metabolismo , Mastite Bovina/metabolismo , Mastite Bovina/microbiologia , RNA/metabolismo , Análise de Sequência de RNA , Infecções Estreptocócicas/genética , Infecções Estreptocócicas/metabolismo , Infecções Estreptocócicas/microbiologia , Transcriptoma
3.
Animal ; 12(6): 1126-1134, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-29065939

RESUMO

Genomic regions under high selective pressure present specific runs of homozygosity (ROH), which provide valuable information on the genetic mechanisms underlying the adaptation to environment imposed challenges. In broiler chickens, the adaptation to conventional production systems in tropical environments lead the animals with favorable genotypes to be naturally selected, increasing the frequency of these alleles in the next generations. In this study, ~1400 chickens from a paternal broiler line were genotyped with the 600 K Affymetrix® Axiom® high-density (HD) genotyping array for estimation of linkage disequilibrium (LD), effective population size (N e ), inbreeding and ROH. The average LD between adjacent single nucleotide polymorphisms (SNPs) in all autosomes was 0.37, and the LD decay was higher in microchromosomes followed by intermediate and macrochromosomes. The N e of the ancestral population was high and declined over time maintaining a sufficient number of animals to keep the inbreeding coefficient of this population at low levels. The ROH analysis revealed genomic regions that harbor genes associated with homeostasis maintenance and immune system mechanisms, which may have been selected in response to heat stress. Our results give a comprehensive insight into the relationship between shared ROH regions and putative regions related to survival and production traits in a paternal broiler line selected for over 20 years. These findings contribute to the understanding of the effects of environmental and artificial selection in shaping the distribution of functional variants in the chicken genome.


Assuntos
Homozigoto , Endogamia , Animais , Galinhas/genética , Genótipo , Desequilíbrio de Ligação , Polimorfismo de Nucleotídeo Único
4.
Genet Mol Res ; 16(1)2017 Mar 22.
Artigo em Inglês | MEDLINE | ID: mdl-28340265

RESUMO

Intense selection for production traits has improved the genetic gain of important economic traits. However, selection for performance and carcass traits has led to the onset of locomotors problems and decreasing bone strength in broilers. Thus, genes associated with bone integrity traits have become candidates for genetic studies in order to reduce the impact of bone disorders in broilers. This study investigated the association of the RUNX2 and TNFSF11 genes with 79 traits related to performance, carcass composition, organs, and bone integrity in a paternal broiler line. Analyses of genetic association between single-nucleotide polymorphisms (SNPs) and traits were carried out using the maximum likelihood procedures for mixed models. Genetic associations (P < 0.05) were found between SNP g.124,883A>G in the RUNX2 gene and chilled femur weight (additive plus dominance deviation effects within sex) and with performance traits (additive within sex and additive effects). The SNP g.14,862T>C in the TNFSF11 gene presented genetic associations (P < 0.05) with additive plus dominance deviation effects within sex for performance traits. Suggestive genetic associations (P < 0.10) were found with abdominal fat and its yield. Selection based on SNPs g.14,862T>C in TNFSF11 and g.124,883A>G in RUNX2 could be used to improve performance and carcass quality traits in the population studied, although SNP g.14,862T>C was not in Hardy-Weinberg equilibrium because it was not undergoing a selection process. Furthermore, it is important to validate these markers in an unrelated population for use in the selection process.


Assuntos
Galinhas/genética , Subunidade alfa 1 de Fator de Ligação ao Core/genética , Ligante RANK/genética , Gordura Abdominal/anatomia & histologia , Animais , Peso Corporal/genética , Densidade Óssea , Galinhas/metabolismo , Subunidade alfa 1 de Fator de Ligação ao Core/metabolismo , Fêmur/anatomia & histologia , Estudos de Associação Genética , Carne/normas , Polimorfismo de Nucleotídeo Único , Ligante RANK/metabolismo , Seleção Genética
5.
Theriogenology ; 92: 204-209, 2017 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-28237337

RESUMO

The aim of this study was to estimate genetic parameters for scrotal circumference at 365 (SC365) and 450 (SC450) days of age, age at first calving (AFC), ribeye area (REA), backfat (BF) thickness, and rump fat (RF) thickness, in order to provide information on potential traits for Nelore cattle breeding program. Genetic parameters were estimated using the Average Information Restricted Maximum Likelihood method in single- and multitrait analyses. Four different animal models were tested for SC365, SC450, REA, BF, and RF in single-trait analyses. For SC365 and SC450, the maternal genetic effect was statistically significant (P < 0.01) and was included for multitrait analyses. The direct heritability estimates for SC365, SC450, AFC, REA, BF, and RF were equal to 0.31, 0.38, 0.24, 0.32, 0.16, and 0.19, respectively. Maternal heritability for SC365 and SC450 was equal to 0.06 and 0.08, respectively. The highest genetic correlations were found among the scrotal circumferences. Testing for the inclusion of maternal effects in genetic parameters estimation for scrotal circumference should be evaluated in the Nelore breeding program, mostly for correctly ranking the animal's estimated breeding values. Similar heritability estimates were observed for scrotal circumference, as well as favorable genetic correlations of this trait with AFC and carcass traits. Thus, scrotal circumference measured at 365 days of age could be a target trait for consideration in the Nelore selection index in order to improve most of the traits herein analyzed.


Assuntos
Composição Corporal/fisiologia , Bovinos/fisiologia , Reprodução/fisiologia , Envelhecimento , Animais , Composição Corporal/genética , Cruzamento , Bovinos/genética , Feminino , Masculino , Modelos Genéticos , Reprodução/genética , Escroto/crescimento & desenvolvimento
6.
Anim Genet ; 48(3): 255-271, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-27910110

RESUMO

This review presents a broader approach to the implementation and study of runs of homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH and their practical implications. ROH are continuous homozygous segments that are common in individuals and populations. The ability of these homozygous segments to give insight into a population's genetic events makes them a useful tool that can provide information about the demographic evolution of a population over time. Furthermore, ROH provide useful information about the genetic relatedness among individuals, helping to minimize the inbreeding rate and also helping to expose deleterious variants in the genome. The frequency, size and distribution of ROH in the genome are influenced by factors such as natural and artificial selection, recombination, linkage disequilibrium, population structure, mutation rate and inbreeding level. Calculating the inbreeding coefficient from molecular information from ROH (FROH ) is more accurate for estimating autozygosity and for detecting both past and more recent inbreeding effects than are estimates from pedigree data (FPED ). The better results of FROH suggest that FROH can be used to infer information about the history and inbreeding levels of a population in the absence of genealogical information. The selection of superior animals has produced large phenotypic changes and has reshaped the ROH patterns in various regions of the genome. Additionally, selection increases homozygosity around the target locus, and deleterious variants are seen to occur more frequently in ROH regions. Studies involving ROH are increasingly common and provide valuable information about how the genome's architecture can disclose a population's genetic background. By revealing the molecular changes in populations over time, genome-wide information is crucial to understanding antecedent genome architecture and, therefore, to maintaining diversity and fitness in endangered livestock breeds.


Assuntos
Genética Populacional , Homozigoto , Endogamia , Gado/genética , Animais , Bovinos , Variação Genética , Cabras , Cavalos , Desequilíbrio de Ligação , Análise de Sequência de DNA , Carneiro Doméstico , Suínos
7.
Poult Sci ; 94(12): 2863-9, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26476088

RESUMO

This study investigates the genetic association of the SNP present in the ACTA1 gene with performance traits, organs and carcass of broilers to help marker-assisted selection of a paternal broiler line (TT) from EMBRAPA Swine and Poultry, Brazil. Genetic and phenotypic data of 1,400 broilers for 68 traits related to body performance, organ weights, weight of carcass parts, and yields as a percentage of organs and carcass parts were used. The maximum likelihood method, considering 4 analytical models, was used to analyze the genetic association between the SNP and these important economic traits. The association analysis was performed using a mixed animal model including the random effect of the animal (polygenic), and the fixed effects of sex (2 levels), hatch (5 levels) and SNP (3 levels), besides the random error. The traits significantly associated (P<0.05) with the SNP were analyzed, along with body weight at 42 days of age (BW42), by the restricted maximum likelihood method using the multi-trait animal model to estimate genetic parameters. The analysis included the residual and additive genetic random effects and the sex-hatch fixed effect. The additive effects of the SNP were associated with breast meat (BMY), liver yield (LIVY), body weight at 35 days of age (BW35); drumstick skin (DSW), drumstick (DW) and breast (BW) weights. The heritability estimates for these traits, in addition to BW42, ranged from 0.24±0.06 to 0.45±0.08 for LIVY and BW35, respectively. The genetic correlation ranged from 0.02±0.18 for LIVY and BMY to 0.97±0.01 for BW35 and BW42. Based on the results of this study, it can be concluded that ACTA1 gene is associated with performance traits BW35, LIV and BMY, DW, BW and DW adjusted for body weight at 42 days of age. Therefore, the ACTA1 gene is an important molecular marker that could be used together with others already described to increase the economically important traits in broilers.


Assuntos
Actinas/genética , Proteínas Aviárias/genética , Galinhas/fisiologia , Polimorfismo de Nucleotídeo Único , Actinas/metabolismo , Animais , Proteínas Aviárias/metabolismo , Peso Corporal , Brasil , Galinhas/genética , Galinhas/crescimento & desenvolvimento , Feminino , Marcadores Genéticos , Funções Verossimilhança , Masculino , Carne/análise , Tamanho do Órgão
8.
Genet Mol Res ; 14(4): 17544-54, 2015 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-26782399

RESUMO

Selection among broilers for performance traits is resulting in locomotion problems and bone disorders, once skeletal structure is not strong enough to support body weight in broilers with high growth rates. In this study, genetic parameters were estimated for body weight at 42 days of age (BW42), and tibia traits (length, width, and weight) in a population of broiler chickens. Quantitative trait loci (QTL) were identified for tibia traits to expand our knowledge of the genetic architecture of the broiler population. Genetic correlations ranged from 0.56 ± 0.18 (between tibia length and BW42) to 0.89 ± 0.06 (between tibia width and weight), suggesting that these traits are either controlled by pleiotropic genes or by genes that are in linkage disequilibrium. For QTL mapping, the genome was scanned with 127 microsatellites, representing a coverage of 2630 cM. Eight QTL were mapped on Gallus gallus chromosomes (GGA): GGA1, GGA4, GGA6, GGA13, and GGA24. The QTL regions for tibia length and weight were mapped on GGA1, between LEI0079 and MCW145 markers. The gene DACH1 is located in this region; this gene acts to form the apical ectodermal ridge, responsible for limb development. Body weight at 42 days of age was included in the model as a covariate for selection effect of bone traits. Two QTL were found for tibia weight on GGA2 and GGA4, and one for tibia width on GGA3. Information originating from these QTL will assist in the search for candidate genes for these bone traits in future studies.


Assuntos
Galinhas/genética , Mapeamento Cromossômico , Locos de Características Quantitativas/genética , Tíbia/crescimento & desenvolvimento , Animais , Cruzamento , Galinhas/crescimento & desenvolvimento , Ligação Genética , Genótipo , Fenótipo
9.
Bol. ind. anim. (Impr.) ; 72(2): l1350-135, 2015.
Artigo em Português | VETINDEX | ID: biblio-1466791

RESUMO

O objetivo deste estudo foi estimar as herdabilidades e as correlações genéticas e fenotípicas para o período de gestação como característica do bezerro (PGbez) e características de desempenho pré desmame: peso ao nascimento (PN), peso ao 120 dias (P120) e peso ao 210 dias (P210), e características de desempenho pós-desmame: peso aos 365 dias e peso aos 450 dias (P450) em animais da raça Nelore participantes do Programa Nelore Brasil coordenado pela Associação Nacional de Criadores e Pesquisadores (ANCP). Os parâmetros foram estimados utilizando o método de máxima verossimilhança restrita por modelo animal, usando o software WOMBAT. A correlação genética entre PGbez e PN foi 0,15, indicando associação favorável entre as duas características, porém de pequena magnitude. O PGbez apresentou correlações genéticas positivas e de baixa magnitude (0,06 a 0,10) com os demais pesos, indicando que a seleção para a diminuição do período de gestação não acarretaria em perdas significativas nos pesos em idades mais avançadas. Além disso, é possível inferir que a seleção para maior P365 não aumentará expressivamente o período de gestação...


The objective of this study was to estimate heritabilities and genetic and phenotypic correlations for gestation length as calf trait (GLcalf) and preweaning [birth weight (BW) and weights at 120 (W120) and 210 (W210) days] and postweaning performance traits [weights at 365 (W365) and 450 (W450) days] in Nellore cattle participating in the Nellore Brazil Program coordinated by the National Association of Breeders and Researchers (Associação Nacional de Criadores e Pesquisadores - ANCP). The parameters were estimated by the restricted maximum likelihood method under an animal model using the WOMBAT software. The genetic correlation between GLcalf and BW was 0.15, indicating a favorable association between the two traits which, however, was of small magnitude. GLcalf showed low positive genetic correlations (0.06 to 0.10) with the other weights, indicating that selection to reduce gestation length would not result in significant losses in weights at older ages. Furthermore, it is possible to infer that selection for higher W365 will not expressively increase gestation length...


Assuntos
Animais , Bovinos , Bovinos/classificação , Crescimento e Desenvolvimento , Hereditariedade/genética , Peso Corporal , Desmame , Gravidez
10.
B. Indústr. Anim. ; 72(2): l1350, 2015.
Artigo em Português | VETINDEX | ID: vti-14077

RESUMO

O objetivo deste estudo foi estimar as herdabilidades e as correlações genéticas e fenotípicas para o período de gestação como característica do bezerro (PGbez) e características de desempenho pré desmame: peso ao nascimento (PN), peso ao 120 dias (P120) e peso ao 210 dias (P210), e características de desempenho pós-desmame: peso aos 365 dias e peso aos 450 dias (P450) em animais da raça Nelore participantes do Programa Nelore Brasil coordenado pela Associação Nacional de Criadores e Pesquisadores (ANCP). Os parâmetros foram estimados utilizando o método de máxima verossimilhança restrita por modelo animal, usando o software WOMBAT. A correlação genética entre PGbez e PN foi 0,15, indicando associação favorável entre as duas características, porém de pequena magnitude. O PGbez apresentou correlações genéticas positivas e de baixa magnitude (0,06 a 0,10) com os demais pesos, indicando que a seleção para a diminuição do período de gestação não acarretaria em perdas significativas nos pesos em idades mais avançadas. Além disso, é possível inferir que a seleção para maior P365 não aumentará expressivamente o período de gestação...(AU)


The objective of this study was to estimate heritabilities and genetic and phenotypic correlations for gestation length as calf trait (GLcalf) and preweaning [birth weight (BW) and weights at 120 (W120) and 210 (W210) days] and postweaning performance traits [weights at 365 (W365) and 450 (W450) days] in Nellore cattle participating in the Nellore Brazil Program coordinated by the National Association of Breeders and Researchers (Associação Nacional de Criadores e Pesquisadores - ANCP). The parameters were estimated by the restricted maximum likelihood method under an animal model using the WOMBAT software. The genetic correlation between GLcalf and BW was 0.15, indicating a favorable association between the two traits which, however, was of small magnitude. GLcalf showed low positive genetic correlations (0.06 to 0.10) with the other weights, indicating that selection to reduce gestation length would not result in significant losses in weights at older ages. Furthermore, it is possible to infer that selection for higher W365 will not expressively increase gestation length...(AU)


Assuntos
Animais , Bovinos , Bovinos/classificação , Hereditariedade/genética , Crescimento e Desenvolvimento , Peso Corporal , Gravidez , Desmame
11.
Genet Mol Res ; 13(4): 10294-300, 2014 Dec 04.
Artigo em Inglês | MEDLINE | ID: mdl-25501241

RESUMO

The objective of this study was to estimate the genetic and environmental parameters for carcass, carcass part, and organ weights in a paternal strain of broiler chickens that was selected mainly for body weight at 42 days of age (BW42) to provide support for poultry genetic improvement programs. A total of 1448 chickens were used that resulted from the expansion of a pure paternal strain named TT, which was developed by Embrapa Suínos e Aves. The following weights were evaluated: BW42, chilled carcass, wing, drumstick meat, thigh meat, breast meat, breast fillet, back, liver, heart (HRT), and gizzard (GIZ). The variance component was estimated by the restricted maximum likelihood method using a multi-trait animal model. The general model included the additive genetic and residual random effects and the fixed effect of the sex-hatch group (10 levels). The heritability estimates ranged from 0.27 ± 0.06 for HRT to 0.44 ± 0.08 for GIZ. These results indicated that all the traits have enough additive genetic variability to respond to selection. The genetic correlation estimates between BW42 and the carcass and carcass part weights were high and positive. However, the genetic correlation estimates between BW42 and organ weights were low. In this population, the carcass traits might respond indirectly to selection applied to BW42. It can be concluded that selection to increase BW42 is not effective in improving broiler organ weight. Therefore, to obtain suitable genetic improvement for these traits, the selection indexes for broilers should include organ weight-based criteria.


Assuntos
Galinhas/genética , Fenótipo , Característica Quantitativa Herdável , Animais , Peso Corporal , Cruzamento , Galinhas/classificação , Feminino , Humanos , Funções Verossimilhança , Carne
12.
Br Poult Sci ; 55(6): 728-31, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25269694

RESUMO

1. objective of the present study was to estimate heritability for hatch weight (HW), body weight at 90 (W90) and 180 (W180) d of age in Brazilian ostriches. 2. The heritability estimates were obtained through the restricted maximum likelihood method for an animal model. Least squares method was used to define possible fixed effects for consideration in the analysis model. 3. The estimates of heritability were 0.42 ± 0.05, 0.16 ± 0.04 and 0.24 ± 0.08 for HW, W90 and W180, respectively. 4. Heritability estimates showed that there are sufficient levels of additive genetic variation present in the traits studied, and these traits may respond to selection.


Assuntos
Peso Corporal/genética , Struthioniformes/anatomia & histologia , Animais , Hibridização Genética , Masculino , Fenótipo , Característica Quantitativa Herdável , Struthioniformes/genética
13.
J Dairy Sci ; 96(11): 7284-7293, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24054283

RESUMO

The objectives of the present study were to estimate genetic parameters of monthly test-day milk yield (TDMY) of the first lactation of Brazilian Holstein cows using random regression (RR), and to compare the genetic gains for milk production and persistency, derived from RR models, using eigenvector indices and selection indices that did not consider eigenvectors. The data set contained monthly TDMY of 3,543 first lactations of Brazilian Holstein cows calving between 1994 and 2011. The RR model included the fixed effect of the contemporary group (herd-month-year of test days), the covariate calving age (linear and quadratic effects), and a fourth-order regression on Legendre orthogonal polynomials of days in milk (DIM) to model the population-based mean curve. Additive genetic and nongenetic animal effects were fit as RR with 4 classes of residual variance random effect. Eigenvector indices based on the additive genetic RR covariance matrix were used to evaluate the genetic gains of milk yield and persistency compared with the traditional selection index (selection index based on breeding values of milk yield until 305 DIM). The heritability estimates for monthly TDMY ranged from 0.12 ± 0.04 to 0.31 ± 0.04. The estimates of additive genetic and nongenetic animal effects correlation were close to 1 at adjacent monthly TDMY, with a tendency to diminish as the time between DIM classes increased. The first eigenvector was related to the increase of the genetic response of the milk yield and the second eigenvector was related to the increase of the genetic gains of the persistency but it contributed to decrease the genetic gains for total milk yield. Therefore, using this eigenvector to improve persistency will not contribute to change the shape of genetic curve pattern. If the breeding goal is to improve milk production and persistency, complete sequential eigenvector indices (selection indices composite with all eigenvectors) could be used with higher economic values for persistency. However, if the breeding goal is to improve only milk yield, the traditional selection index is indicated.


Assuntos
Cruzamento/métodos , Bovinos/genética , Bovinos/fisiologia , Lactação/genética , Leite/metabolismo , Fatores Etários , Animais , Brasil , Feminino , Modelos Genéticos
14.
Poult Sci ; 92(9): 2283-9, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23960110

RESUMO

The objectives of this study were to estimate genetic parameters for accumulated egg production over 3-wk periods and for total egg production over 54 wk of egg-laying, and using principal component analysis (PCA), to explore the relationships among the breeding values of these traits to identify the possible genetic relationships present among them and hence to observe which of them could be used as selection criteria for improving egg production. Egg production was measured among 1,512 females of a line of White Leghorn laying hens. The traits analyzed were the number of eggs produced over partial periods of 3 wk, thus totaling 18 partial periods (P1 to P18), and the total number of eggs produced over the period between the 17 and 70 wk of age (PTOT), thus totaling 54 wk of egg production. Estimates of genetic parameters were obtained by means of the restricted maximum likelihood method, using 2-trait animal models. The PCA was done using the breeding values of partial and total egg production. The heritability estimates ranged from 0.05 ± 0.03 (P1 and P8) to 0.27 ± 0.06 (P4) in the 2-trait analysis. The genetic correlations between PTOT and partial periods ranged from 0.19 ± 0.31 (P1) to 1.00 ± 0.05 (P10, P11, and P12). Despite the high genetic correlation, selection of birds based on P10, P11, and P12 did not result in an increase in PTOT because of the low heritability estimates for these periods (0.06 ± 0.03, 0.12 ± 0.04, and 0.10 ± 0.04, respectively). The PCA showed that egg production can be divided genetically into 4 periods, and that P1 and P2 are independent and have little genetic association with the other periods.


Assuntos
Criação de Animais Domésticos , Galinhas/fisiologia , Ovos , Reprodução , Seleção Genética , Animais , Brasil , Cruzamento , Galinhas/genética , Feminino , Funções Verossimilhança , Fenótipo , Análise de Componente Principal , Estações do Ano , Fatores de Tempo
15.
Animal ; 7(4): 540-6, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23034151

RESUMO

In most studies on beef cattle longevity, only the cows reaching a given number of calvings by a specific age are considered in the analyses. With the aim of evaluating all cows with productive life in herds, taking into consideration the different forms of management on each farm, it was proposed to measure cow longevity from age at last calving (ALC), that is, the most recent calving registered in the files. The objective was to characterize this trait in order to study the longevity of Nellore cattle, using the Kaplan-Meier estimators and the Cox model. The covariables and class effects considered in the models were age at first calving (AFC), year and season of birth of the cow and farm. The variable studied (ALC) was classified as presenting complete information (uncensored = 1) or incomplete information (censored = 0), using the criterion of the difference between the date of each cow's last calving and the date of the latest calving at each farm. If this difference was >36 months, the cow was considered to have failed. If not, this cow was censored, thus indicating that future calving remained possible for this cow. The records of 11 791 animals from 22 farms within the Nellore Breed Genetic Improvement Program ('Nellore Brazil') were used. In the estimation process using the Kaplan-Meier model, the variable of AFC was classified into three age groups. In individual analyses, the log-rank test and the Wilcoxon test in the Kaplan-Meier model showed that all covariables and class effects had significant effects (P < 0.05) on ALC. In the analysis considering all covariables and class effects, using the Wald test in the Cox model, only the season of birth of the cow was not significant for ALC (P > 0.05). This analysis indicated that each month added to AFC diminished the risk of the cow's failure in the herd by 2%. Nonetheless, this does not imply that animals with younger AFC had less profitability. Cows with greater numbers of calvings were more precocious than those with fewer calvings.


Assuntos
Bovinos/fisiologia , Longevidade , Parto , Envelhecimento , Animais , Brasil , Feminino , Estimativa de Kaplan-Meier , Modelos Biológicos , Gravidez , Modelos de Riscos Proporcionais
16.
Reprod Fertil Dev ; 25(5): 775-81, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-22953973

RESUMO

Phenotypic data from female Canchim beef cattle were used to obtain estimates of genetic parameters for reproduction and growth traits using a linear animal mixed model. In addition, relationships among animal estimated breeding values (EBVs) for these traits were explored using principal component analysis. The traits studied in female Canchim cattle were age at first calving (AFC), age at second calving (ASC), calving interval (CI), and bodyweight at 420 days of age (BW420). The heritability estimates for AFC, ASC, CI and BW420 were 0.03±0.01, 0.07±0.01, 0.06±0.02, and 0.24±0.02, respectively. The genetic correlations for AFC with ASC, AFC with CI, AFC with BW420, ASC with CI, ASC with BW420, and CI with BW420 were 0.87±0.07, 0.23±0.02, -0.15±0.01, 0.67±0.13, -0.07±0.13, and 0.02±0.14, respectively. Standardised EBVs for AFC, ASC and CI exhibited a high association with the first principal component, whereas the standardised EBV for BW420 was closely associated with the second principal component. The heritability estimates for AFC, ASC and CI suggest that these traits would respond slowly to selection. However, selection response could be enhanced by constructing selection indices based on the principal components.


Assuntos
Cruzamento/normas , Bovinos/genética , Bovinos/fisiologia , Crescimento e Desenvolvimento/fisiologia , Fenótipo , Reprodução/fisiologia , Fatores Etários , Animais , Peso Corporal , Brasil , Feminino , Crescimento e Desenvolvimento/genética , Modelos Lineares , Análise de Componente Principal , Reprodução/genética
17.
Poult Sci ; 92(1): 277-82, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23243259

RESUMO

The objective of this study was to fit growth curves using nonlinear and linear functions to describe the growth of ostriches in a Brazilian population. The data set consisted of 112 animals with BW measurements from hatching to 383 d of age. Two nonlinear growth functions (Gompertz and logistic) and a third-order polynomial function were applied. The parameters for the models were estimated using the least-squares method and Gauss-Newton algorithm. The goodness-of-fit of the models was assessed using R(2) and the Akaike information criterion. The R(2) calculated for the logistic growth model was 0.945 for hens and 0.928 for cockerels and for the Gompertz growth model, 0.938 for hens and 0.924 for cockerels. The third-order polynomial fit gave R(2) of 0.938 for hens and 0.924 for cockerels. Among the Akaike information criterion calculations, the logistic growth model presented the lowest values in this study, both for hens and for cockerels. Nonlinear models are more appropriate for describing the sigmoid nature of ostrich growth.


Assuntos
Struthioniformes/crescimento & desenvolvimento , Envelhecimento/fisiologia , Agricultura , Animais , Brasil , Modelos Biológicos
18.
Poult Sci ; 91(11): 2977-87, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23091159

RESUMO

Egg production curves describe the laying patterns of hen populations over time. The objectives of this study were to fit the weekly egg production rate of selected and nonselected lines of a White Leghorn hen population, using nonlinear and segmented polynomial models, and to study how the selection process changed the egg-laying patterns between these 2 lines. Weekly egg production rates over 54 wk of egg production (from 17 to 70 wk of age) were measured from 1,693 and 282 laying hens from one selected and one nonselected (control) genetic line, respectively. Six nonlinear and one segmented polynomial models were gathered from the literature to investigate whether they could be used to fit curves for the weekly egg production rate. The goodness of fit of the models was measured using Akaike's information criterion, mean square error, coefficient of determination, graphical analysis of the fitted curves, and the deviations of the fitted curves. The Logistic, Yang, Segmented Polynomial, and Grossman models presented the best goodness of fit. In this population, there were significant differences between the parameter estimates of the curves fitted for the selected and nonselected lines, thus indicating that the effect of selection changed the shape of the egg production curves. The selection for egg production was efficient in modifying the birds' egg production curve in this population, thus resulting in genetic gain from the 5th to the 54th week of egg laying and improved the peak egg production and the persistence of egg laying.


Assuntos
Galinhas/genética , Galinhas/fisiologia , Oviposição/genética , Oviposição/fisiologia , Seleção Genética/fisiologia , Animais , Feminino , Modelos Biológicos
19.
Genet Mol Res ; 11(3): 1819-29, 2012 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-22869538

RESUMO

We estimated genetic parameters for egg production in different periods by means of random regression models, aiming at selection based on partial egg production from a generation of layers. The production was evaluated for each individual by recording the number of eggs produced from 20 to 70 weeks of age, with partial records taken every three weeks for a total of 17 periods. The covariance functions were estimated with a random regression model by the restricted maximum likelihood method. A model composed of third-order polynomials for the additive effect, ninth-order polynomials for the permanent environment, and a residual variance structure with five distinct classes, was found to be most suitable for adjusting the egg production data for laying hens. The heritability estimates varied from 0.04 to 0.14. The genetic correlations were all positive, varying from 0.10 to 0.99. Selection applied in partial egg production periods will result in greater genetic profit for the adjacent periods. However, as the distance in time between periods increases, selection becomes less efficient. Selection based on the second period (23 to 25 weeks of age), where greater heritability was estimated, would note benefit the final egg-laying cycle periods.


Assuntos
Galinhas/genética , Modelos Genéticos , Oviposição/genética , Envelhecimento/genética , Animais , Padrões de Herança/genética , Funções Verossimilhança , Fenótipo , Análise de Regressão
20.
J Appl Genet ; 53(3): 331-5, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22562374

RESUMO

Genetic parameters for weight at maturity (WM), maturation rate (MR), age and weight at first calving (AFC and WFC) and second calving (ASC and WSC) were estimated for females of the Canchim breed. The number of records per trait ranged from 1440 to 1923. The restricted maximum likelihood method was used and the statistical model included the fixed effect of contemporary group and the additive genetic and residual as random effects. The mean heritability estimate and respective standard errors were 0.34±0.05 (WM), 0.13±0.04 (MR), 0.14±0.04 (AFC), 0.44±0.06 (WFC), 0.16±0.06 (ASC) and 0.39±0.06 (WSC). The heritability estimate for WM and MR suggested that it would be possible to achieve changes in the animals' growth curve through selection, but the genetic correlation between these two traits suggested that there would be antagonism between them. Selection for WM would result in animals with later growth and would also affect individuals' sexual precocity. This was also seen from the genetic correlations between WM and the other traits, which ranged from 0.37 to 0.98; and between MR and the other traits, which ranged from -0.83 to -0.25. Selection to modify WM would be expected to result in correlated responses in AFC, WFC and WSC and a moderate response in ASC. Although the heritability estimate for MR was low, selection aimed for its increase might cause a large decrease in AFC, ASC and WFC and a moderate change in WSC, and this could be an alternative for improving the progeny's overall performance.


Assuntos
Envelhecimento/genética , Peso Corporal/genética , Bovinos/crescimento & desenvolvimento , Bovinos/genética , Estudos de Associação Genética , Carne , Maturidade Sexual/genética , Animais , Feminino , Padrões de Herança/genética
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