RESUMO
Resumen Los estudios a nivel regional que evalúan las dinámicas espacio-temporales de la vegetación en Costa Rica, especialmente, dentro de los Parques Nacionales son escasos. Así, considerando aportar en este vacío de conocimiento, este artículo analiza la distribución espacio-temporal de la vegetación dentro del periodo 1960-1976, 1992, 1997 y 2012 en Parque Nacional Corcovado, localizado en la Península de Osa y catalogado como el bosque tropical lluvioso más septentrional en la costa pacífica de América. Además, esta área contiene una riqueza de biodiversidad, fundamentada en su antigüedad geológica, el aislamiento que presentó durante largos periodos; así como las condiciones climáticas particulares que generan ecosistemas únicos como bosques nubosos relacionados con brisa marina a alturas de más de 500 msnm. Este estudio evalúa la distribución espacial de la vegetación a partir de mapas resultantes del proceso de fotointerpretación de imágenes del 1960, 1976, 1997 y 2012, así como del análisis del índice de paisaje. Se concluye que las transformaciones espacio-temporales de la vegetación durante el periodo de estudio han sido mínimas, y el hecho de que hayan sido escasas las áreas impactadas por la actividad antrópica, generó una restauración ecológica importante durante las últimas décadas. Se encontró una relación de expansión y contracción entre el bosque nuboso y bosque, así como este último y el bosque inundado, en función de la recuperación de la cobertura boscosa dentro del Parque Nacional y de la Península de Osa, y el volumen y distribución de la precipitación. Asimismo, este estudio propone la necesidad de establecer el monitoreo permanente de la vegetación para esclarecer las relaciones que se establecen entre estos tipos de vegetación.
Abstract Regional studies evaluating spatial-temporal transformations of vegetation in Costa Rica, especially within National Parks, are scarce. Therefore, this paper analyses the vegetation distribution during 1960, 1976, 1997 and 2014 in Corcovado National Park. This protected area is located in the Osa Peninsula, Costa Rica, and represents the Northern most tropical rain forest on the Pacific coast of America. This area offers a great wealth of biodiversity due to its geological formation, isolation for long time periods, and its particular climatic conditions that generate unique ecosystems such as cloud forests associated with ocean situated close to hill breezes located over 500 masl, as well as dense tropical forest. This study evaluates the spatial distribution of vegetation based on maps that resulted from the process of photo-interpretation of 1960, 1976, 1997 and 2012, as well as from the landscape index analysis. It concludes that during the study period, the vegetation changes have been minimal. Instead, in the few areas impacted by human activity (small-scale agriculture and pasture lands) an ecological restoration has occurred during recent decades. In addition, this research suggests that the recovering forest cover within the park and even within the Osa Peninsula has been expanding the cloud forest. An increase and contraction relationship between the different categories (Cloud forest and forests as well of flooded forest and forest in flat zones) was found. Furthermore, this study suggests the need of permanent plots in order to monitor vegetation and identify the factors that explain this previous process. Rev. Biol. Trop. 66(1): 352-367. Epub 2018 March 01.
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Haemophilia is the most frequent hereditary haemorrhagic illness and it is due to the deficiency of coagulation factors VIII (haemophilia A, HA) or IX (haemophilia B, HB). The prevalence of this disease varies according to the country, those having better survival rates having also higher prevalences. Specifically in Costa Rica, there are around 130 HA and 30 HB families. This study reports the prevalence and a spatial distribution analysis of both types of the disease in this country. The prevalence of haemophilia in this country is 7 cases per 100000 men, for HA it is 6 cases per 100000 and for HB it is 1 case per 100000 male inhabitants. The prevalence of this disease is low when compared with other populations. This low prevalence could be due to the many patients that have died because of infection with human immunodeficiency virus during the 1980s. The prevalence of haemophilia in Costa Rica is almost one half of that present in developed countries. Nevertheless, the ratio between HA and HB follows world tendency: 5:1. In this study, nationwide geographical distribution maps were drawn in order to visualize the origin of severe cases and how this influences the pattern of distribution for both types of haemophilia. By means of these maps, it was possible to state that there is no association between the sites of maximum prevalence of mutated alleles and ethnicity. With this study, haemophilia prevalence distribution maps can be used to improve efforts for the establishment of hemophilia clinics or specialized health centers in those areas which hold the highest prevalences in this country. Also, this knowledge can be applied to improve treatment skills and offer the possibility of developing focused genetic counseling for these populations.
Assuntos
Hemofilia A/epidemiologia , Adolescente , Adulto , Criança , Costa Rica/epidemiologia , Demografia , Fator VIII/genética , Geografia , Hemofilia A/complicações , Hemofilia A/mortalidade , Hemofilia B/epidemiologia , Hemofilia B/genética , Hemofilia B/mortalidade , Hepatite C/complicações , Hepatite C/epidemiologia , Humanos , Masculino , Prevalência , Índice de Gravidade de DoençaRESUMO
The general population of Costa Rica has sometimes been considered to be the product of an amalgamation of groups of diverse origin. To determine the magnitude of accumulated admixture since Spanish colonization, 11 classic genetic markers were analyzed in a total of 2196 individuals originating from five distinct regions of the country. A maximum likelihood approach was used. The proportions of genes of European, Amerindian and African ancestry were found to be 61%, 30% and 9% of the total population, respectively. Variation was observed at a regional level, with an increased European influence in the North (66%) and Central (65%) regions. Meanwhile an increase in Amerindian ancestry was found in the South (38%), and a higher incidence in the contribution of African genes was detected in the coastal regions (13% in the Atlantic and 14% in the North Pacific). A principal component (PC) analysis showed that 76% of the existing variability can be explained by the first two PCs, which is in agreement with the variations observed in the admixture process by geographic area. It has been concluded that the Costa Rican population is truly trihybrid, similar to populations in other Latin American countries; however, it differs from them fundamentally by the proportion of gene flow from ancestral populations.
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Antígenos de Grupos Sanguíneos/genética , DNA/genética , Frequência do Gene , Genética Populacional , Costa Rica , Marcadores Genéticos , HumanosRESUMO
Tainos and Caribs were the inhabitants of the Caribbean when Columbus reached the Americas; both human groups became extinct soon after contact, decimated by the Spaniards and the diseases they brought. Samples belonging to pre-Columbian Taino Indians from the La Caleta site (Dominican Republic) have been analyzed, in order to ascertain the genetic affinities of these groups in relation to present-day Amerinds, and to reconstruct the genetic and demographic events that took place during the peopling of the Caribbean. Twenty-seven bone samples were extracted and analyzed for mtDNA variation. The four major Amerindian mtDNA lineages were screened through amplification of the specific marker regions and restriction enzymatic digestion, when needed. The HVRI of the control region was amplified with four sets of overlapping primers and sequenced in 19 of the samples. Both restriction enzyme and sequencing results suggest that only two (C and D) of the major mtDNA lineages were present in the sample: 18 individuals (75%) belonged to the C haplogroup, and 6 (25%) to the D haplogroup. Sequences display specific substitutions that are known to correlate with each haplogroup, a fact that helped to reject the possibility of European DNA contamination. A low rate of Taq misincorporations due to template damage was estimated from the cloning and sequencing of different PCR products of one of the samples. High frequencies of C and D haplogroups are more common in South American populations, a fact that points to that sub-continent as the homeland of the Taino ancestors, as previously suggested by linguistic and archaeological evidence. Sequence and haplogroup data show that the Tainos had a substantially reduced mtDNA diversity, which is indicative of an important founder effect during the colonization of the Caribbean Islands, assumed to have been a linear migratory movement from mainland South America following the chain configuration of the Antilles.
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DNA Mitocondrial/genética , Emigração e Imigração/história , Indígenas Centro-Americanos/genética , Povo Asiático/genética , Sequência de Bases , Osso e Ossos/química , Sepultamento , Clonagem Molecular , República Dominicana , Evolução Molecular , Frequência do Gene , Variação Genética , História Medieval , Humanos , Indígenas Centro-Americanos/história , Indígenas Norte-Americanos/genética , Indígenas Sul-Americanos/genética , Dados de Sequência Molecular , Paleontologia , Filogenia , Reação em Cadeia da Polimerase , Homologia de Sequência do Ácido NucleicoRESUMO
A study of several loci blood groups (ABO, Diego, Duffy, Kell, Kidd, Lewis, Lutheran, MNSs, P, Rhesus and Secretor), and Hp serum protein was carried out on a sample of 2,196 unrelated Costa Rican individuals of both sexes. Data was classified and analyzed according to geographic regions. Gene frequencies and the goodness of fit to Hardy-Weinberg equilibrium were estimated by the maximum likelihood method. A geographic structuring was observed in the Costa Rican population. All the regions of Costa Rica show higher heterozigosity values than the ones observed in the indigenous Costa Rican groups, but similar or slightly higher than the ones observed in the Spanish populations. The genetic distance analysis evidenced that the regions of Costa Rica group close to each other in intermediate positions between the Amerindians and the Spanish, fact that is coherent with the statement that attributes a intermediate origin to the general population of Costa Rica. The data contradicts the idea that the Central region has a radically different population than the rest of the country. The outcome of these markers revealed poor values of exclusion probability in forensic and paternity cases, which confirms the importance of their replacement for DNA markers in the outlines of human identification of judicial investigation systems. These results are similar to other studies made in Latin American populations.
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Antígenos de Grupos Sanguíneos/genética , Frequência do Gene , Haptoglobinas/genética , Adulto , Alelos , Costa Rica , Feminino , Medicina Legal , Marcadores Genéticos , Humanos , Masculino , Fenótipo , Polimorfismo GenéticoRESUMO
Nicaraguans have become the most numerous and fastest increasing minority in Costa Rica: at present they represent around 6% of the total population of the country. We have analyzed the allele and genotype frequencies of six PCR-based genetic markers (LDLR, GYPA, HBGG, D7S8, GC, and HLA-DQA1) in 100 unrelated Nicaraguans living in Costa Rica. All loci studied were in Hardy-Weinberg equilibrium. Some statistical parameters of forensic interest were also calculated (h, PD and CE). Allele frequencies of the markers HLA-DQA1 and GYPA were found to be significantly different between the populations of Nicaragua and Costa Rica. Nevertheless, genetic distances showed that Nicaragua is close to other Hispanic-admixed populations like those from Argentina, Chile, Colombia, Costa Rica, and USA Hispanics. The loci set was assessed to be useful for paternity testing and individual identification in the Nicaraguan population residing in Costa Rica.
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Frequência do Gene , Marcadores Genéticos , Adulto , Alelos , Costa Rica , Feminino , Antropologia Forense , Genótipo , Humanos , Masculino , Nicarágua/etnologia , Paternidade , Reação em Cadeia da Polimerase , Polimorfismo GenéticoRESUMO
Autosomal recessive Charcot-Marie-Tooth disease (CMT) represents a heterogeneous group of disorders affecting the peripheral nervous system. The axonal form of the disease is designated as "CMT type 2" (CMT2), and one locus (1q21.2-q21.3) has been reported for the autosomal recessive form. Here we report the results of a genomewide search in an inbred Costa Rican family (CR-1) affected with autosomal recessive CMT2. By analyzing three branches of the family we detected linkage to the 19q13.3 region, and subsequent homozygosity mapping defined shared haplotypes between markers D19S902 and D19S907 in a 5.5-cM range. A maximum two-point LOD score of 9.08 was obtained for marker D19S867, at a recombination fraction of.00, which strongly supports linkage to this locus. The epithelial membrane protein 3 gene, encoding a PMP22 homologous protein and located on 19q13.3, was ruled out as being responsible for this form of CMT. The age at onset of chronic symmetric sensory-motor polyneuropathy was 28-42 years (mean 33.8 years); the electrophysiological data clearly reflect an axonal degenerative process. The phenotype and locus are different from those of demyelinating CMT4F, recently mapped to 19q13.1-13.3; hence, the disease affecting the Costa Rican family constitutes an axonal, autosomal recessive CMT subtype (ARCMT2B).