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1.
Environ Geochem Health ; 46(3): 99, 2024 Feb 25.
Artigo em Inglês | MEDLINE | ID: mdl-38403801

RESUMO

Mining increases environmental concentrations of potentially toxic elements (PTEs) accumulating in organisms and spreading in the human food chain-their presence in milk is of great human health concern. Pathways were identified by which these elements reach raw milk from farms within a mining area in Northwestern Mexico; health risks for dairy cattle and children were also evaluated. Water from river and cattle waterers, as well as, soils showed that PTE concentrations generally below the Mexican and international limits; cattle forage concentrations were above the World Health Organization limits. Al, Mg, Mo, Ni and Zn were recorded in raw milk samples from the mining area, showing that Cd, Co, Cr, Cu, Pb and V are transferred from soil to plants but not accumulated in raw milk. Zn concentrations in raw milk exceeded the permissible limit; milk from farms without mining operations (comparison site) showed the presence of Al, Cr and Cu. In cattle tail hair, PTE did not correlate with raw milk concentrations. Metal accumulation in milk was higher through water consumption than that accumulated through forage consumption. Daily intakes (DI) of Al, Mg and Zn in cows could represent a risk for their health. The observed biotransference was higher than in other parts of Mexico, and the calculated DI and hazard quotients indicate no adverse health effects for children. However, the hazard Index values indicate that exposure to multiple PTE represents a risk for children. Management measures should be performed to control the cumulative risks to protect young children's health.


Assuntos
Metais Pesados , Poluentes do Solo , Criança , Feminino , Humanos , Animais , Bovinos , Pré-Escolar , Solo , Metais Pesados/toxicidade , Metais Pesados/análise , Água , México , Mineração , Plantas , Monitoramento Ambiental , Medição de Risco , Poluentes do Solo/toxicidade , Poluentes do Solo/análise
2.
Yeast ; 41(1-2): 35-51, 2024 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-38054508

RESUMO

Yeasts are a diverse group of fungal microorganisms that are widely used to produce fermented foods and beverages. In Mexico, open fermentations are used to obtain spirits from agave plants. Despite the prevalence of this traditional practice throughout the country, yeasts have only been isolated and studied from a limited number of distilleries. To systematically describe the diversity of yeast species from open agave fermentations, here we generate the YMX-1.0 culture collection by isolating 4524 strains from 68 sites with diverse climatic, geographical, and biological contexts. We used MALDI-TOF mass spectrometry for taxonomic classification and validated a subset of the strains by ITS and D1/D2 sequencing, which also revealed two potential novel species of Saccharomycetales. Overall, the composition of yeast communities was weakly associated with local variables and types of climate, yet a core set of six species was consistently isolated from most producing regions. To explore the intraspecific variation of the yeasts from agave fermentations, we sequenced the genomes of four isolates of the nonconventional yeast Kazachstania humilis. The genomes of these four strains were substantially distinct from a European isolate of the same species, suggesting that they may belong to different populations. Our work contributes to the understanding and conservation of an open fermentation system of great cultural and economic importance, providing a valuable resource to study the biology and genetic diversity of microorganisms living at the interface of natural and human-associated environments.


Assuntos
Agave , Humanos , Fermentação , Agave/microbiologia , México , Leveduras , Bebidas Alcoólicas/microbiologia
3.
J Plant Res ; 136(3): 277-290, 2023 May.
Artigo em Inglês | MEDLINE | ID: mdl-36905462

RESUMO

The formation of the Baja California Peninsula (BCP) has impacted the microevolutionary dynamics of different species in ways that depend on biological traits such as dispersal capacity. Plants with relatively low levels of vagility have exhibited high genetic divergence between the BCP and Continental mainland. Brahea armata (Arecaceae) is a palm species inhabiting the northern part of the BCP and Sonora; its distribution occurs in isolated oases of vegetation. We aimed to evaluate the influence of the formation of the BCP on the genetic structure of B. armata using nuclear microsatellites and chloroplast markers (cpDNA) to compare patterns of genetic diversity and structure with previous published studies. Because gene flow through seeds is usually more limited compared to pollen flow, we expect to find stronger genetic structure at (cpDNA) than at nuclear markers. Moreover, larger genetic structure might also be explained by the smaller effective population size of cpDNA. We analyzed six microsatellite markers and two cpDNA regions. The main results indicated high levels of genetic differentiation among isolated populations located in the BCP, while low genetic differentiation was found between southern populations of the BCP and Sonora, suggesting long distance gene flow. In contrast, chloroplast markers indicated high levels of genetic structure between BCP and Sonora populations, suggesting asymmetrical gene flow between pollen (measured by nuclear microsatellites) and seed (cpDNA markers). This study provides valuable information on genetic diversity of B. armata that can be relevant for conservation and management; and develops microsatellites markers that can be transferred to other Brahea species.


Assuntos
Arecaceae , Fluxo Gênico , México , DNA de Cloroplastos/genética , Estruturas Genéticas , Variação Genética , Repetições de Microssatélites
4.
Plants (Basel) ; 11(11)2022 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-35684199

RESUMO

Due to the recent increase in demand for agave-based beverages, many wild agave populations have experienced rapid decline and fragmentation, whereas cultivated plants are now managed at monocultural plantations, in some cases involving clonal propagation. We examined the relative effect of migration, genetic drift, natural selection and human activities on the genetic repertoire of Agave angustifolia var. pacifica, an agave used for bacanora (an alcoholic spirit similar to tequila) production in northwestern Mexico. We sampled 34 wild and cultivated sites and used over eleven thousand genome-wide SNPs. We found shallow genetic structure among wild samples, although we detected differentiation between coastal and inland sites. Surprisingly, no differentiation was found between cultivated and wild populations. Moreover, we detected moderate inbreeding (FIS ~ 0.13) and similar levels of genomic diversity in wild and cultivated agaves. Nevertheless, the cultivated plants had almost no private alleles and presented evidence of clonality. The overall low genetic structure in A. angustifolia var. pacifica is apparently the result of high dispersibility promoted by pollinators and the possibility of clonal reproduction. Incipient cultivation history and reliance on wild seeds and plants are probably responsible for the observed patterns of high genetic connectivity and considerable diversity in cultivated samples.

5.
Biomimetics (Basel) ; 7(2)2022 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-35466255

RESUMO

We have studied the external surface (elytra) of the Sonoran Desert beetle (Eleodes eschscholtzii). Our aim was to assess whether this species has similar traits to some beetles from the Namibian Desert that are known to have hierarchical micropatterns that allow for water harvesting. We have conducted scanning electron microscopy (SEM) and apparent contact angle experiments on specimens collected at two sampling sites with different ambient humidity. The results show that the beetle's external surface microstructure is composed of a compact array of polygons with randomly scattered protuberances. The density of the polygons in the microstructure is different for individuals collected in different sites: the polygon array is denser in the more humid site and less dense in the drier site. The measured contact angles also depend on the sampling site. For individuals collected in the drier site, the average apparent contact angle is 70°, whereas for the more humid site, the average apparent contact angle is 92°. FT-IR experiments are consistent with the presence of hydrophobic wax compounds in the studied surfaces. Our investigation opens new questions that are currently being addressed by experiments that are underway. For instance, it would be interesting to know whether the observed nanopatterns could be used in biomimetic devices for water harvesting purposes.

6.
Biology (Basel) ; 11(3)2022 Feb 27.
Artigo em Inglês | MEDLINE | ID: mdl-35336753

RESUMO

Genetic studies in rare species are important to determine their patterns of genetic diversity among populations and implement conservation plans aimed to reduce extinction risks. Pachyphytum caesium is an endemic species with extremely small populations in central Mexico. This work analyzes the diversity and genetic structure of Pachyphytum cesium (Crassulaceae) to change the conservation status and propose conservation strategies. Twelve dominant ISSR markers were used to describe the genetic diversity of all known populations. Additionally, we carried out two simulations to explore how the loss of individuals or the local populations extinction affect the genetics parameters of the species. The average results indicated moderate levels of genetic diversity (number of alleles = 89.7 ± 3.9, expected heterozygosity = 0.212 ± 0.0, and percentage of polymorphic loci = 56.1 ± 3.9), parameters that decreased significantly when simulations were performed in P. caesium. Additionally, a genetic structure of the populations was found with low gene flow (Nm = 0.92). Genetic parameters are negatively affected by the loss of individuals and the local extinction of populations. Based on our results, we propose to reclassify the conservation status of the species in danger of extinction, hence a series of conservation strategies are provided to prevent its disappearance.

7.
Microbiol Res ; 247: 126732, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-33743500

RESUMO

Mining operations often generate tailing dams that contain toxic residues and are a source of contamination when left unconfined. The establishment of a plant community over the tailings has been proposed as a containment strategy known as phytostabilization. Previously, we described naturally occurring mine tailing colonizing plants such as Acacia farnesiana, Brickellia coulteri, Baccharis sarothroides, and Gnaphalium leucocephalum without finding local adaptation. We explored the rhizosphere microbes as contributors in plant establishment and described both the culturable and in situ diversity of rhizospheric bacteria using the 16S rRNA gene and metagenomic shotgun sequencing. We built a synthetic community (SC) of culturable rhizosphere bacteria from the mine tailings. The SC was then the foundation for a serial passes experiment grown in plant-derived nutrient sources, selecting for heavy metals tolerance, community cooperation, and competition. The outcome of the serial passes was named the 'final synthetic community' (FSC). Overall, diversity decreased from in situ uncultivable microbes from roots (399 bacteria genera) to the cultivated communities (291 genera), the SC (94 genera), and the lowest diversity was in the FSC (43 genera). Metagenomic diversity clustered into 94,245 protein families, where we found plant growth promotion-related genes such as the csgBAC and entCEBAH, coded in a metagenome-assembled genome named Kosakonia sp. Nacozari. Finally, we used the FSC to inoculate mine tailing colonizing plants in a greenhouse experiment. The plants with the FSC inocula observed higher relative plant growth rates in sterile substrates. The FSC presents promising features that might make it useful for phytostabilization tailored strategies.


Assuntos
Metagenômica , Plantas/microbiologia , Rizosfera , Microbiologia do Solo , Bactérias/classificação , Bactérias/genética , Bactérias/metabolismo , Biodegradação Ambiental , Metais Pesados , Microbiota/fisiologia , Mineração , Desenvolvimento Vegetal , Raízes de Plantas , RNA Ribossômico 16S , Solo , Poluentes do Solo
8.
Environ Monit Assess ; 193(4): 236, 2021 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-33782791

RESUMO

Rio Sonora watershed and its aquifer-located in northwest Mexico-have been influenced by mining operations for 140 years, possibly causing emissions of potentially toxic elements (PTE) and affecting health of exposed populations. On the basis of available data from governmental surveys (2014-2017) and recent sampling (2018), this study constructed reliable PTE total concentration database that allowed us to report temporal/spatial variations in surface and groundwater and their associated health risks to the population living in the central part of the Rio Sonora basin. The data clearly showed that a mining spill that took place in 2014 has had an adverse impact on total PTE concentrations in surface water. They also indicated the presence of different PTE point source locations that have continued to cause contamination of surface water at levels of health concern. Data also suggested slight impacts of the spill event on groundwater possibly related to soil neutralizing potential. Two metal groups were detected for surface waters (Pb-Cd-As-Ni-Cr and of Zn-Al-Cr) and groundwaters (Cr-As-Cu-Cd and Zn-Al), which suggest that they have different sources or are being released by different processes. The potential health impacts of PTE concentrations were associated with specific age groups, dates, and areas. The results indicate that in this complex semi-arid rural system, current and historical mining activities, as well as contrasting hydrological conditions, have impacted surface and groundwater quality with important ecological and human health risks.


Assuntos
Metais Pesados , Poluentes do Solo , Poluentes Químicos da Água , Monitoramento Ambiental , Humanos , Metais Pesados/análise , México , Medição de Risco , Solo , Poluentes do Solo/análise , Poluentes Químicos da Água/análise , Recursos Hídricos
9.
J Environ Manage ; 270: 110873, 2020 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-32721316

RESUMO

Metals are key materials extensively employed in several industries to produce technological and daily-life products. The mining industry that produces such commodities generates Tons of waste that if not remediated can be transferred to the surrounding environment, thus representing a water, air, and soil pollution threat. In this work, we evaluated the feasibility of microbial sulfate reduction (SR) as a management strategy for this waste. Mine tailings were sampled from two abandoned mining sites located in Sonora (northwestern Mexico) and treated in anaerobic microcosms under SR conditions using anaerobic sludge as the inoculum at two different tailing:inoculum ratios (TIR). Major TIR's were found to be the triggering factor for the highest SR activities observed (73.6 ± 8.8 mg SO42- L-1 day-1). This stimulation was linked to the dissolution of sulfate bearing minerals (anglesite, jarosite, and gypsum) which provided additional sulfate for microbial activity. However, under this condition, longer lag phases for SR were observed, which was potentially due to pH inhibition at early incubation stages (pH ~3.7). Despite this, all biologically SR performing treatments presented important sulfide precipitation which was associated to changes in the mineralogy of the mine tailings. Metals of environmental concern such as As, Cd, Co, Cr and, Pb were detected to have shifted from the aqueous extractable phase to the bound to Fe and Mn oxides and residual phases. This finding was in accordance with the non-detectable concentrations of these metals in the aqueous phase by the end of the biological treatment which proved the effectiveness of this approach. This study provides insights into the promising potential of anaerobic microbes for the environmental management of mine tailings.


Assuntos
Metais Pesados/análise , Poluentes do Solo/análise , Conservação dos Recursos Naturais , Monitoramento Ambiental , Poluição Ambiental/análise , México , Mineração
10.
Environ Sci Pollut Res Int ; 27(31): 39635-39650, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32651780

RESUMO

Past mining activities have left a legacy of abandoned mine tailing deposits whose metal contaminants poses serious risks to ecosystems and human health. While the development of a vegetated cover in mine tailings can help in mitigating these risks, the local factors limiting plant establishment in these sites are not well understood, restricting phytostabilization efforts. Here, we explore some of the barriers that limit seedling establishment of two species (Vachellia farnesiana and Prosopis velutina) in a mine tailing deposit located in Nacozari, Sonora, Mexico, and assess whether compost addition can help in overcoming these barriers in pot and field experiments. Our field observations found 20 times more carbon and at least 4 times more nitrogen concentration in areas under vegetated patches than in non-vegetated areas, while a previous study found no difference in metal concentrations and other physicochemical parameters. This suggests that organic matter and nutrients are a major limitation for plant establishment. In agreement with this, species failed to establish without compost addition in the field experiment. Compost addition also had a positive effect on biomass accumulation, pH and microbial activity, but increased the substrate soluble concentration of As, Cu, and Zn. Nonetheless, only Cu, K, and Mo in P. velutina accumulated in tissues at levels considered toxic for animal consumption. Our study documents that compost addition facilitated plant establishment for the phytostabilization of mine tailings and help to prevent the dispersion of most metal contaminants via animal consumption. We encourage the use of complementary strategies to minimize the risk of dispersion of metal contaminants.


Assuntos
Compostagem , Poluentes do Solo/análise , Ecossistema , Humanos , México , Plântula/química , Solo
11.
Environ Sci Pollut Res Int ; 27(21): 26605-26620, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32372357

RESUMO

Generation, storage, and management of waste coming from industrial processes are a growing worldwide problem. One of the main contributors is the mining industry, in particular tailings generated by historical mining, which are barely maintained, especially in developing countries. Assessing the impact of a mining site to surrounding soils and ecosystems can be complex, especially when determining mobility and accessibility of the contaminants is required to perform ecological and human health risk assessment. As an effort to obtain information regarding mobility and accessibility of some potentially toxic elements (Zn, Pb, and As) from an historical mining site of northwestern Mexico, the abandoned mine tailings of San Felipe de Jesús in central Sonora and adjacent agricultural soils were investigated. Mobility and accessibility were assessed by means of sequential extraction procedures and using simulated physiological media. Additionally, an assessment of accidental oral intake was calculated considering the bioaccessible fractions. Results show that higher concentrations of contaminants were found in sulfide-rich tailings (Zn = 92,540; Pb = 21,288; As = 19,740 mg kg-1) compared with oxide-rich tailings (Zn = 43,240; Pb = 14,763; As = 13,401 mg kg-1). Concentrations in agricultural soils were on average Zn = 4755, Pb = 2840, and As = 103 mg kg-1. Zinc was mainly recovered from labile fractions in oxide-rich tailings (~ 60%) and in a lower amount from sulfide-rich tailings (~ 30%). Pb and As were mainly associated with residual fractions (80-95%) in both types of tailings. The percentage of mobile fractions (sum of water-soluble, exchangeable, and bound to carbonate fractions) in agricultural soils was as follows: Zn ~ 60%, Pb ~ 15%, and As ~ 70%. Regarding the phytoaccessible fraction, the studied elements in mine tailings and agricultural soil samples exceeded the threshold limits, except for As in agricultural soils. According to data obtained, toxic effects were also calculated. As for daily oral intake for non-carcinogenic effects in adults and children, only Pb and As exceeded reference dose values, especially in children exposed to sulfide-rich tailings and agricultural soils. Regarding carcinogenic effects of Pb and As, most of the samples were above acceptable risk values.


Assuntos
Metais Pesados/análise , Poluentes do Solo/análise , Criança , Ecossistema , Monitoramento Ambiental , Humanos , Chumbo , México , Zinco
12.
New Phytol ; 227(6): 1872-1884, 2020 09.
Artigo em Inglês | MEDLINE | ID: mdl-32392621

RESUMO

Niche conservatism is the tendency of lineages to retain the same niche as their ancestors. It constrains biological groups and prevents ecological divergence. However, theory predicts that niche conservatism can hinder gene flow, strengthen drift and increase local adaptation: does it mean that it also can facilitate speciation? Why does this happen? We aim to answer these questions. We examined the variation of chloroplast DNA, genome-wide single nucleotide polymorphisms, morphological traits and environmental variables across the Dioon merolae cycad populations. We tested geographical structure, scenarios of demographic history, and niche conservatism between population groups. Lineage divergence is associated with the presence of a geographical barrier consisting of unsuitable habitats for cycads. There is a clear genetic and morphological distinction between the geographical groups, suggesting allopatric divergence. However, even in contrasting available environmental conditions, groups retain their ancestral niche, supporting niche conservatism. Niche conservatism is a process that can promote speciation. In D. merolae, lineage divergence occurred because unsuitable habitats represented a barrier against gene flow, incurring populations to experience isolated demographic histories and disparate environmental conditions. This study explains why cycads, despite their ancient lineage origin and biological stasis, have been able to diversify into modern ecosystems worldwide.


Assuntos
Zamiaceae , Ecossistema , Especiação Genética , Geografia , México , Filogenia
13.
Environ Sci Pollut Res Int ; 26(25): 26203-26215, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31286374

RESUMO

Mining is known as one of the primary economic activities where exploitation of minerals and other materials have become essential for human development. However, this activity may represent a risk to the environment, starting from deforestation and ending with production of residues that might contain potentially toxic elements. Tailing deposits from historical mining are an example of waste that may represent an environmental concern when abandoned and exposed to environmental conditions. The town of Nacozari de Garcia, in northwestern Mexico, has three abandoned mine tailings (locally known as tailings I, II, and III) located around the urban area that represent important sources of dust and pollution. Images obtained using unmanned aerial vehicles (UAV) in conjunction with geochemical data are used to assess historic erosion calculation and pollution considering contamination and hazard indexes in tailings II and III. Digital elevation models of abandoned tailings were obtained using photogrammetry with UAV. A total of 37 surficial samples were collected from mine tailings to determine elemental concentrations (As, Cu, Pb, W, Zn) using portable X-ray fluorescence. Higher concentrations were found on samples from mine tailing II. Average concentrations followed the decreasing order of Cu > Zn > W > Pb > As for tailing II, whereas decreasing order of Cu > Zn > W > As > Pb was found for tailing III. Contamination Index (CI) values obtained from tailings II and III represent a low potential of pollution, whereas efflorescent crusts from these tailings represent a high potential of polluting soils and sediments by dust generation. Hazard Average Quotient (HAQ) values on both tailings suggest a very high potential of contamination if fluids infiltrate tailings and interact with surficial water and/or groundwater. Obtained surfaces of mine tailings II and III are 146,216 and 216,689 m2, respectively, which represent around 11% of the urbanized area. A loss mass of 321,675 tons was determined for mine tailing II, whereas 634,062 tons for tailing III, accounting for 0.96 million tons of total eroded mass. Since abandonment, calculated erosion rates of 493 t ha-1 year-1 (tailing II) and 232 t ha-1 year-1 (tailing III) are in agreement with those determined in other mining areas. CI and HAQ indexes provide good estimates of pollution associated with abandoned mine tailings from Nacozari de García. Historic erosion determined in these tailings is an environmental concern since eroded material and polluted water have been incorporated into the Moctezuma River, which feeds several villages, whose major activities include agriculture and livestock raising.


Assuntos
Poeira/análise , Poluição Ambiental/análise , Minerais/análise , Poluentes do Solo/análise , Agricultura , Humanos , México , Mineração , Rios/química
14.
J Hered ; 110(2): 229-246, 2019 03 05.
Artigo em Inglês | MEDLINE | ID: mdl-30496534

RESUMO

The host dependence of mistletoes suggests that they track the distributions of their hosts. However, the factors that determine the geographic distribution of mistletoes are not well understood. In this study, the phylogeography of Psittacanthus sonorae was reconstructed by sequencing one nuclear (ITS) and two plastid (trnL-F and atpB-rbcL) regions of 148 plants from populations separated by the Sea of Cortez. Divergence time and gene flow were estimated to gain insight into the historical demography and geographic structuring of genetic variation. We also described and mapped the spatial distribution of suitable habitat occupied by P. sonorae and its most common host Bursera microphylla in the Sonoran Desert, along with their responses to Quaternary climate fluctuations using environmental data and ecological niche modeling (ENM). We detected environmental and genetic differentiation between the peninsular and continental P. sonorae populations. Population divergence occurred during the Pleistocene, around the time of the Last Glacial Maximum. No signals of population growth were detected, with net gene flow moving from the continent to the peninsula. ENM models indicate decoupled responses by the mistletoe and its main host to past climate changes. For the Last Interglacial to the present, most models produce only partial areas of overlap on both the peninsula and the continent. Our results support a scenario of Late-Pleistocene isolation and divergence with asymmetrical gene flow between peninsular and continental P. sonorae populations. Continental populations migrated to the peninsula and the spatial isolation probably produced genetic differentiation under different environmental conditions.


Assuntos
Loranthaceae/classificação , Loranthaceae/genética , Filogenia , Filogeografia , Evolução Biológica , Clima Desértico , Meio Ambiente , Variação Genética , Genética Populacional , Geografia , Haplótipos , Modelos Teóricos
15.
Ann Bot ; 121(3): 535-548, 2018 03 05.
Artigo em Inglês | MEDLINE | ID: mdl-29293877

RESUMO

Background and Aims: Biogeographic transition zones are promising areas to study processes of biogeographic evolution and its influence on biological groups. The Mexican transition zone originated due to the overlap of Nearctic and Neotropical biota, which promoted great biological diversification. However, since most previous studies in this area were focused on revealing the phylogeography of Nearctic plants, how historical biogeographic configuration influenced the expansion and diversification of the Neotropical flora remains almost unknown. Using the cycad genus Dioon (Zamiaceae), this study aimed to test whether the biogeographic provinciality of the Mexican transition zone reflects the history of diversification of Neotropical plants. Methods: Two chloroplast DNA (cpDNA) regions were analysed from 101 specimens of 15 Dioon species to reveal the distribution of haplogroups. In addition, genome-wide single nucleotide polymorphisms (SNPs) from 84 specimens were used to test the concordance between phylogenetic clusters and the biogeographic provinces. An ultrametric tree was constructed from the sequences containing SNPs to reconstruct the biogeographic events of vicariance and dispersal of Dioon across the Neotropical biogeographic provinces. Key Results: Four Dioon lineages with strong phylogeographic structures were recognized using both cpDNA and SNP data. The lineages correspond to two clades that originated from a common ancestor in Eastern Mexico. One clade expanded and diversified in South-east Mexico and Central America. Another clade diversified into three lineages that dispersed to North-east, South and North-west Mexico. Each lineage was biogeographically delimitated. Biogeographic provinces might have provided disparate ecological conditions that facilitated speciation in Dioon since the Miocene. Conclusions: The current genetic structure and species diversity of Dioon depict the history of expansion and diversification of the northernmost Neotropical provinces. Past biogeographic connectivities were favoured by elevated topographies, since mountain systems served as corridors for the migration of Dioon and as refugia of tropical communities that diversified during the formation of modern Neotropical forests.


Assuntos
Zamiaceae/genética , América Central , DNA de Cloroplastos/genética , Variação Genética/genética , Haplótipos/genética , México , Filogenia , Filogeografia , Polimorfismo de Nucleotídeo Único/genética , Zamiaceae/anatomia & histologia
16.
PeerJ ; 5: e3280, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28484675

RESUMO

Phytostabilization is a remediation technology that uses plants for in-situ stabilization of contamination in soils and mine tailings. The objective of this study was to identify native plant species with potential for phytostabilization of the abandoned mine tailings in Nacozari, Sonora in northern Mexico. A flora of 42 species in 16 families of angiosperms was recorded on the tailings site and the abundance of the most common perennial species was estimated. Four of the five abundant perennial species showed evidence of regeneration: the ability to reproduce and establish new seedlings. A comparison of selected physicochemical properties of the tailings in vegetated patches with adjacent barren areas suggests that pH, electrical conductivity, texture, and concentration of potentially toxic elements do not limit plant distribution. For the most abundant species, the accumulation factor for most metals was <1, with the exception of Zn in two species. A short-term experiment on adaptation revealed limited evidence for the formation of local ecotypes in Prosopis velutina and Amaranthus watsonii. Overall, the results of this study indicate that five native plant species might have potential for phytostabilization of the Nacozari tailings and that seed could be collected locally to revegetate the site. More broadly, this study provides a methodology that can be used to identify native plants and evaluate their phytostabilization potential for similar mine tailings.

17.
PeerJ ; 4: e1855, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27076998

RESUMO

Cacao trees have been cultivated in Mesoamerica for at least 4,000 years. In this study, we analyzed sequence variation in the chloroplast DNA trnH-psbA intergenic spacer from 28 cacao trees from different farms in the Soconusco region in southern Mexico. Genetic relationships were established by two analysis approaches based on geographic origin (five populations) and genetic origin (based on a previous study). We identified six polymorphic sites, including five insertion/deletion (indels) types and one transversion. The overall nucleotide diversity was low for both approaches (geographic = 0.0032 and genetic = 0.0038). Conversely, we obtained moderate to high haplotype diversity (0.66 and 0.80) with 10 and 12 haplotypes, respectively. The common haplotype (H1) for both networks included cacao trees from all geographic locations (geographic approach) and four genetic groups (genetic approach). This common haplotype (ancient) derived a set of intermediate haplotypes and singletons interconnected by one or two mutational steps, which suggested directional selection and event purification from the expansion of narrow populations. Cacao trees from Soconusco region were grouped into one cluster without any evidence of subclustering based on AMOVA (F ST = 0) and SAMOVA (F ST = 0.04393) results. One population (Mazatán) showed a high haplotype frequency; thus, this population could be considered an important reservoir of genetic material. The indels located in the trnH-psbA intergenic spacer of cacao trees could be useful as markers for the development of DNA barcoding.

18.
Mol Phylogenet Evol ; 69(3): 940-9, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23831459

RESUMO

Elucidating phylogenetic relationships and species boundaries within complex taxonomic groups is challenging for intrinsic and extrinsic (i.e., technical) reasons. Mexican pinyon pines are a complex group whose phylogenetic relationships and species boundaries have been widely studied but poorly resolved, partly due to intrinsic ecological and evolutionary features such as low morphological and genetic differentiation caused by recent divergence, hybridization and introgression. Extrinsic factors such as limited sampling and difficulty in selecting informative molecular markers have also impeded progress. Some of the Mexican pinyon pines are of conservation concern but others may remain unprotected because the species boundaries have not been established. In this study we combined approaches to resolve the phylogenetic relationships in this complex group and to establish species boundaries in four recently diverged taxa: P. discolor, P. johannis, P. culminicola and P. cembroides. We performed phylogenetic analyses using the chloroplast markers matK and psbA-trnH as well as complete and partial chloroplast genomes of species of Subsection Cembroides. Additionally, we performed a phylogeographic analysis combining genetic data (18 chloroplast markers), morphological data and geographical data to define species boundaries in four recently diverged taxa. Ecological divergence was supported by differences in climate among localities for distinct genetic lineages. Whereas the phylogenetic analysis inferred with matK and psbA-trnH was unable to resolve the relationships in this complex group, we obtained a resolved phylogeny with the use of the chloroplast genomes. The resolved phylogeny was concordant with a haplotype network obtained using chloroplast markers. In species with potential for recent divergence, hybridization or introgression, nonhierarchical network-based approaches are probably more appropriate to protect against misclassification due to incomplete lineage sorting. The boundaries among genetic lineages were delimited by the inclusion of morphological, geographical and ecological data in the haplotype network. These multiple lines of evidence help to assign species boundaries in this complex group. P. johannis, P. discolor, P. culminicola and P. cembroides are different species based on their genetic, morphological and ecological niche differences. We suggest a reevaluation of the conservation status of these species considering the information generated in this study.


Assuntos
Evolução Molecular , Filogenia , Pinus/classificação , Teorema de Bayes , Conservação dos Recursos Naturais , DNA de Cloroplastos/genética , DNA de Plantas/genética , Genoma de Cloroplastos , Haplótipos , México , Repetições de Microssatélites , Modelos Genéticos , Filogeografia , Pinus/genética , Análise de Sequência de DNA
19.
Conserv Biol ; 24(6): 1664-73, 2010 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-20575988

RESUMO

In large parts of northern Mexico native plant communities are being converted to non-native buffelgrass (Pennisetum ciliare) pastures, and this conversion could fundamentally alter primary productivity and species richness. In Sonora, Mexico land conversion is occurring at a regional scale along a rainfall-driven gradient of primary productivity, across which native plant communities transition from desert scrub to thorn scrub. We used a paired sampling design to compare a satellite-derived index of primary productivity, richness of perennial plant species, and canopy-height profiles of native plant communities with buffelgrass pastures. We sampled species richness across a gradient of primary productivity in desert scrub and thorn scrub vegetation to examine the influence of site productivity on the outcomes of land conversion. We also examined the influence of pasture age on species richness of perennial plants. Index values of primary productivity were lower in buffelgrass pastures than in native vegetation, which suggests a reduction in primary productivity. Land conversion reduced species richness by approximately 50% at local and regional scales, reduced tree and shrub cover by 78%, and reduced canopy height. Land conversion disproportionately reduced shrub species richness, which reflects the common practice among Sonoran ranchers of conserving certain tree and cactus species. Site productivity did not affect the outcomes of land conversion. The age of a buffelgrass pasture was unrelated to species richness within the pasture, which suggests that passive recovery of species richness to preconversion levels is unlikely. Our findings demonstrate that land conversion can result in large losses of plant species richness at local and regional scales and in substantial changes to primary productivity and vegetation structure, which casts doubt on the feasibility of restoring native plant communities without active intervention on the part of land managers.


Assuntos
Biodiversidade , Ecossistema , Poaceae/fisiologia , Conservação dos Recursos Naturais , Espécies Introduzidas , México , Dinâmica Populacional
20.
New Phytol ; 185(3): 829-40, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19968800

RESUMO

Although the 6 magnitude and pattern of correlation among floral traits (phenotypic integration) is usually conceived as an adaptation for successful pollination and reproduction, studies on the evolution of plant reproductive systems have generally focused on one or a few characters. If evolutionary transitions between reproductive systems involve morphological floral adjustments, changes in the magnitude and pattern of phenotypic integration of floral traits may be expected. In this study, we focused on the evolutionary dynamics of a complex adaptive trait, the extent of reciprocity (reciprocal placement) among sexual organs in a heterostylous species, and explored the associated changes in phenotypic floral integration during the transition from tristyly to distyly. The extent of reciprocity and both the magnitude and pattern of floral integration were characterized in 12 populations of Oxalis alpina representing the tristyly-distyly gradient. Although the extent of reciprocity increased along the tristyly-distyly transition, the flower size diminished. These adjustments did not affect the magnitude, but did affect the pattern, of floral integration. *Changes in the pattern of floral integration suggested that allometric, functional and pleiotropic relationships among floral traits were affected during this evolutionary transition.


Assuntos
Gleiquênias/anatomia & histologia , Gleiquênias/fisiologia , Flores/anatomia & histologia , Flores/fisiologia , Geografia , México , Modelos Biológicos , Análise Multivariada , Fenótipo , Análise de Componente Principal , Reprodução
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