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1.
Genet Mol Res ; 13(1): 626-35, 2014 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-24615028

RESUMO

The fragments of the Atlantic Forest of southern Bahia have a long history of intense logging and selective cutting. Some tree species, such as jequitibá rosa (Cariniana legalis), have experienced a reduction in their populations with respect to both area and density. To evaluate the possible effects of selective logging on genetic diversity, gene flow, and spatial genetic structure, 51 C. legalis individuals were sampled, representing the total remaining population from the cacao agroforestry system. A total of 120 alleles were observed from the 11 microsatellite loci analyzed. The average observed heterozygosity (0.486) was less than the expected heterozygosity (0.721), indicating a loss of genetic diversity in this population. A high fixation index (FIS = 0.325) was found, which is possibly due to a reduction in population size, resulting in increased mating among relatives. The maximum (1055 m) and minimum (0.095 m) distances traveled by pollen or seeds were inferred based on paternity tests. We found 36.84% of unique parents among all sampled seedlings. The progenitors of the remaining seedlings (63.16%) were most likely out of the sampled area. Positive and significant spatial genetic structure was identified in this population among classes 10 to 30 m away with an average coancestry coefficient between pairs of individuals of 0.12. These results suggest that the agroforestry system of cacao cultivation is contributing to maintaining levels of diversity and gene flow in the studied population, thus minimizing the effects of selective logging.


Assuntos
Cacau/genética , Variação Genética , Repetições de Microssatélites/genética , Árvores , Cacau/crescimento & desenvolvimento , Ecossistema , Fluxo Gênico , Genética Populacional , Humanos , Reprodução/genética
2.
Genet Mol Res ; 6(3): 543-53, 2007 Sep 30.
Artigo em Inglês | MEDLINE | ID: mdl-17985307

RESUMO

Dalbergia nigra (rosewood) is a long-lived leguminous species, which is endemic to the Brazilian Atlantic forest. Because of the high economic value of its wood, this species has been over-explored in recent years. Currently, rosewood is included in the IUCN Red List as vulnerable. We examined the genetic diversity of 87 specimens of D. nigra sampled from a continuous forest in the Veracel Reserve and Brazilwood Ecological Station, Porto Seguro, Bahia state, with random amplified polymorphic DNA markers. Grouping analyses were done using unweighted pair group method with arithmetic averages. Using the 16 most informative primers, 112 markers were obtained; 39% (44 bands) were polymorphic. A genetic similarity matrix was made based on the polymorphic bands. The dispersion graph and dendrogram analyses showed three distinct sub-populations. The degree of polymorphism was high, near that of other populations of similar species; however, it was considered low for the conservation of this species.


Assuntos
Dalbergia/genética , Genes de Plantas , Biologia Computacional/métodos , Primers do DNA/química , Primers do DNA/genética , DNA de Plantas , Marcadores Genéticos , Variação Genética , Genética Populacional , Genótipo , Modelos Teóricos , Filogenia , Reação em Cadeia da Polimerase , Polimorfismo Genético , Técnica de Amplificação ao Acaso de DNA Polimórfico
3.
Genet. mol. res. (Online) ; Genet. mol. res. (Online);6(3): 543-553, 2007. ilus, tab
Artigo em Inglês | LILACS | ID: lil-498917

RESUMO

Dalbergia nigra (rosewood) is a long-lived leguminous species, which is endemic to the Brazilian Atlantic forest. Because of the high economic value of its wood, this species has been over-explored in recent years. Currently, rosewood is included in the IUCN Red List as vulnerable. We examined the genetic diversity of 87 specimens of D. nigra sampled from a continuous forest in the Veracel Reserve and Brazilwood Ecological Station, Porto Seguro, Bahia state, with random amplified polymorphic DNA markers. Grouping analyses were done using unweighted pair group method with arithmetic averages. Using the 16 most informative primers, 112 markers were obtained; 39% (44 bands) were polymorphic. A genetic similarity matrix was made based on the polymorphic bands. The dispersion graph and dendrogram analyses showed three distinct sub-populations. The degree of polymorphism was high, near that of other populations of similar species; however, it was considered low for the conservation of this species.


Assuntos
Biologia Computacional/métodos , DNA de Plantas , Polimorfismo Genético , Primers do DNA/química , Marcadores Genéticos , Variação Genética , Genética Populacional , Genótipo , Modelos Teóricos , Filogenia , Primers do DNA/genética , Técnica de Amplificação ao Acaso de DNA Polimórfico
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