RESUMO
Pediococcus acidilactici strain S1, a lactic acid-fermenting bacterium, was isolated from makgeolli-a Korean traditional fermented alcoholic beverage. Here we report the 1,980,172 bp (G + C content, 42%) genome sequence of Pediococcus acidilactici strain S1 with 1,525 protein-coding sequences (CDS), of which 47% could be assigned to recognized functional genes. The genome sequence of the strain S1 might provide insights into the genetic basis of the lactic acid bacterium with alcohol-tolerant.(AU)
Assuntos
Pediococcus acidilactici , Genoma Bacteriano , Análise de Sequência de DNA , Ácido LácticoRESUMO
Abstract Pediococcus acidilactici strain S1, a lactic acid-fermenting bacterium, was isolated from makgeolli-a Korean traditional fermented alcoholic beverage. Here we report the 1,980,172 bp (G + C content, 42%) genome sequence of Pediococcus acidilactici strain S1 with 1,525 protein-coding sequences (CDS), of which 47% could be assigned to recognized functional genes. The genome sequence of the strain S1 might provide insights into the genetic basis of the lactic acid bacterium with alcohol-tolerant.
Assuntos
Genoma Bacteriano , Ácido Láctico/metabolismo , Bebidas Alcoólicas/microbiologia , Pediococcus acidilactici/isolamento & purificação , Pediococcus acidilactici/genética , Sequência de Bases , República da Coreia , Fermentação , Pediococcus acidilactici/metabolismo , Sequenciamento Completo do GenomaRESUMO
Abstract Pseudomonas taiwanensis strain SJ9 is a caprolactam degrader, isolated from industrial wastewater in South Korea and considered to have the potential for caprolactam bioremediation. The genome of this strain is approximately 6.2 Mb (G + C content, 61.75%) with 6,010 protein-coding sequences (CDS), of which 46% are assigned to recognized functional genes. This draft genome of strain SJ9 will provide insights into the genetic basis of its caprolactam-degradation ability.
Assuntos
Pseudomonas/genética , Pseudomonas/metabolismo , DNA Bacteriano/genética , DNA Bacteriano/química , Caprolactama/metabolismo , Genoma Bacteriano , Análise de Sequência de DNA , Pseudomonas/isolamento & purificação , Composição de Bases , Microbiologia da Água , Biotransformação , Fases de Leitura Aberta , Anotação de Sequência Molecular , Resíduos Industriais , Coreia (Geográfico)RESUMO
Pseudomonas taiwanensis strain SJ9 is a caprolactam degrader, isolated from industrial wastewater in South Korea and considered to have the potential for caprolactam bioremediation. The genome of this strain is approximately 6.2 Mb (G + C content, 61.75%) with 6,010 protein-coding sequences (CDS), of which 46% are assigned to recognized functional genes. This draft genome of strain SJ9 will provide insights into the genetic basis of its caprolactam-degradation ability.(AU)
Assuntos
Pseudomonas/genética , Sequenciamento de Nucleotídeos em Larga Escala , Análise de Sequência de RNA , Biodegradação Ambiental , Nylons , República da Coreia , CaprolactamaRESUMO
Pediococcus acidilactici strain S1, a lactic acid-fermenting bacterium, was isolated from makgeolli-a Korean traditional fermented alcoholic beverage. Here we report the 1,980,172bp (G+C content, 42%) genome sequence of Pediococcus acidilactici strain S1 with 1,525 protein-coding sequences (CDS), of which 47% could be assigned to recognized functional genes. The genome sequence of the strain S1 might provide insights into the genetic basis of the lactic acid bacterium with alcohol-tolerant.
Assuntos
Bebidas Alcoólicas/microbiologia , Genoma Bacteriano , Ácido Láctico/metabolismo , Pediococcus acidilactici/genética , Pediococcus acidilactici/isolamento & purificação , Sequência de Bases , Fermentação , Pediococcus acidilactici/metabolismo , República da Coreia , Sequenciamento Completo do GenomaRESUMO
Abstract Thermococcus thioreducens DSM 14981T, a sulfur-reducing archaeon, was isolated from the rainbow hydrothermal vent site on the Mid-Atlantic Ridge. Herein, we report the draft genome sequence of T. thioreducens DSM 14981T; we obtained 41 contigs with a genome size of 2,052,483 bp and G + C content of 53.5%. This genome sequence will not only help understand how the archaeon adapts to the deep-sea hydrothermal environment but also aid the development of enzymes that are highly stable under extreme conditions for industrial applications.
Assuntos
Enxofre/metabolismo , Thermococcus/genética , Thermococcus/metabolismo , Genoma Arqueal , Genômica , Sequenciamento de Nucleotídeos em Larga Escala , Análise de Sequência de DNA , Biologia Computacional/métodos , Genômica/métodos , Anotação de Sequência MolecularRESUMO
Abstract Pediococcus acidilactici strain K3 is an alcohol-tolerant lactic acid bacterium isolated from nuruk, which is a traditional Korean fermentation starter for makgeolli brewing. Draft genome of this strain was approximately 1,991,399 bp (G+C content, 42.1%) with 1525 protein-coding sequences (CDS), of which 44% were assigned to recognized functional genes. This draft genome sequence data of the strain K3 will provide insights into the genetic basis of its alcohol-tolerance.
Assuntos
Adaptação Biológica/efeitos dos fármacos , Adaptação Biológica/genética , Genoma Bacteriano , Etanol/farmacologia , Pediococcus acidilactici/efeitos dos fármacos , Pediococcus acidilactici/genética , Ácido Láctico/biossíntese , Biologia Computacional/métodos , Genômica/métodos , Etanol/metabolismo , Fermentação , Sequenciamento de Nucleotídeos em Larga Escala , Anotação de Sequência Molecular , Pediococcus acidilactici/isolamento & purificação , Pediococcus acidilactici/metabolismoRESUMO
Thermococcus thioreducens DSM 14981T, a sulfur-reducing archaeon, was isolated from the rainbow hydrothermal vent site on the Mid-Atlantic Ridge. Herein, we report the draft genome sequence of T. thioreducens DSM 14981T; we obtained 41 contigs with a genome size of 2,052,483 bp and G + C content of 53.5%. This genome sequence will not only help understand how the archaeon adapts to the deep-sea hydrothermal environment but also aid the development of enzymes that are highly stable under extreme conditions for industrial applications.(AU)
Assuntos
Thermococcus/genética , Bactérias Redutoras de Enxofre , Sequenciamento Completo do Genoma , Fontes HidrotermaisRESUMO
Pediococcus acidilactici strain K3 is an alcohol-tolerant lactic acid bacterium isolated from nuruk, which is a traditional Korean fermentation starter for makgeolli brewing. Draft genome of this strain was approximately 1,991,399 bp (G+C content, 42.1%) with 1525 protein-coding sequences (CDS), of which 44% were assigned to recognized functional genes. This draft genome sequence data of the strain K3 will provide insights into the genetic basis of its alcohol-tolerance.(AU)
Assuntos
Pediococcus acidilactici/genética , Análise de Sequência de Proteína , Fermentação , Bebidas Alcoólicas/análiseRESUMO
Pediococcus acidilactici strain K3 is an alcohol-tolerant lactic acid bacterium isolated from nuruk, which is a traditional Korean fermentation starter for makgeolli brewing. Draft genome of this strain was approximately 1,991,399bp (G+C content, 42.1%) with 1525 protein-coding sequences (CDS), of which 44% were assigned to recognized functional genes. This draft genome sequence data of the strain K3 will provide insights into the genetic basis of its alcohol-tolerance.
Assuntos
Adaptação Biológica/efeitos dos fármacos , Adaptação Biológica/genética , Etanol/farmacologia , Genoma Bacteriano , Pediococcus acidilactici/efeitos dos fármacos , Pediococcus acidilactici/genética , Biologia Computacional/métodos , Etanol/metabolismo , Fermentação , Genômica/métodos , Sequenciamento de Nucleotídeos em Larga Escala , Ácido Láctico/biossíntese , Anotação de Sequência Molecular , Pediococcus acidilactici/isolamento & purificação , Pediococcus acidilactici/metabolismoRESUMO
Pseudomonas taiwanensis strain SJ9 is a caprolactam degrader, isolated from industrial wastewater in South Korea and considered to have the potential for caprolactam bioremediation. The genome of this strain is approximately 6.2 Mb (G+C content, 61.75%) with 6,010 protein-coding sequences (CDS), of which 46% are assigned to recognized functional genes. This draft genome of strain SJ9 will provide insights into the genetic basis of its caprolactam-degradation ability.
Assuntos
Caprolactama/metabolismo , DNA Bacteriano/química , DNA Bacteriano/genética , Genoma Bacteriano , Pseudomonas/genética , Pseudomonas/metabolismo , Análise de Sequência de DNA , Composição de Bases , Biotransformação , Resíduos Industriais , Coreia (Geográfico) , Anotação de Sequência Molecular , Fases de Leitura Aberta , Pseudomonas/isolamento & purificação , Microbiologia da ÁguaRESUMO
Thermococcus thioreducens DSM 14981T, a sulfur-reducing archaeon, was isolated from the rainbow hydrothermal vent site on the Mid-Atlantic Ridge. Herein, we report the draft genome sequence of T. thioreducens DSM 14981T; we obtained 41 contigs with a genome size of 2,052,483bp and G+C content of 53.5%. This genome sequence will not only help understand how the archaeon adapts to the deep-sea hydrothermal environment but also aid the development of enzymes that are highly stable under extreme conditions for industrial applications.