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The objective was to evaluate the supplementation strategy's effect on beef cattle during the growing phase and two systems during the finishing phase. One hundred and twenty young bulls were randomly divided in a 2 × 2 factorial design to receive either mineral (ad libitum) or protein + energy (3 g/kg body weight (BW)/day) during the growing phase and pasture plus concentrate supplementation (20 g/kg BW/day) or feedlot (25:75% corn silage:concentrate) during the finishing phase. Feedlot-fed bulls had meat (Longissimus thoracis-LT) with a higher content of lipids and saturated and monounsaturated fatty acids and a greater upregulation of stearoyl-CoA desaturase and sterol regulatory element-binding protein-1c than animals that fed on pasture (p < 0.05). On the other hand, pasture-fed bulls had meat with a higher content of α-linoleic acid, linolenic acid, and n6 and a greater n6:n3 ratio compared to the feedlot-fed group (p < 0.05). In addition, meat from pasture-fed bulls during the finishing phase had 17.6% more isocitrate dehydrogenase enzyme concentration than the feedlot group (p = 0.02). Mineral-fed and pasture-finished bulls showed down-regulation of peroxisome proliferator-activated receptor gamma (p < 0.05), while the bulls fed protein + energy and finished in the feedlot had higher carnitine palmitoyltransferase 2 expression (p ≤ 0.013). In conclusion, mineral or protein + energy supplementation in the growing does not affect the fatty acid composition of intramuscular fat of LT muscle. In the finishing phase, feeding bulls in the feedlot upregulates the lipogenic genes and consequently improves the intramuscular fat content in the meat.

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This study aimed to evaluate by wide-expression profile analysis how early weaning at 120 days can alter the skeletal muscle metabolism of calves supplemented with a concentrated diet until the growth phase. Longissimus thoracis muscle samples were obtained by biopsy from two groups of calves, early weaned (EW; n = 8) and conventionally weaned (CW; n = 8) at two different times (120 days of age-T1 [EW] and 205 days of age-T2 [CW]). Next, differential gene expression analysis and functional enrichment of metabolic pathways and biological processes were performed. The results showed respectively 658 and 165 differentially expressed genes when T1 and T2 were contrasted in the early weaning group and when early and conventionally weaned groups were compared at T2. The FABP4, SCD1, FASN, LDLR, ADIPOQ, ACACA, PPARD, and ACOX3 genes were prospected in both comparisons described above. Given the key role of these differentially expressed genes in lipid and fatty acid metabolism, the results demonstrate the effect of diet on the modulation of energy metabolism, particularly favoring postnatal adipogenesis and lipogenesis, as well as a consequent trend in obtaining better quality cuts, as long as an environment for the maintenance of these alterations until adulthood is provided.

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The aim of this study was to identify differentially expressed genes, biological processes, and metabolic pathways related to adipogenesis and lipogenesis in calves receiving different diets during the cow-calf phase. Forty-eight uncastrated F1 Angus × Nellore males were randomly assigned to two treatments from thirty days of age to weaning: no creep feeding (G1) or creep feeding (G2). The creep feed offered contained ground corn (44.8%), soybean meal (40.4%), and mineral core (14.8%), with 22% crude protein and 65% total digestible nutrients in dry matter. After weaning, the animals were feedlot finished for 180 days and fed a single diet containing 12.6% forage and 87.4% corn-based concentrate. Longissimus thoracis muscle samples were collected by biopsy at weaning for transcriptome analysis and at slaughter for the measurement of intramuscular fat content (IMF) and marbling score (MS). Animals of G2 had 17.2% and 14.0% higher IMF and MS, respectively (p < 0.05). We identified 947 differentially expressed genes (log2 fold change 0.5, FDR 5%); of these, 504 were upregulated and 443 were downregulated in G2. Part of the genes upregulated in G2 were related to PPAR signaling (PPARA, SLC27A1, FABP3, and DBI), unsaturated fatty acid synthesis (FADS1, FADS2, SCD, and SCD5), and fatty acid metabolism (FASN, FADS1, FADS2, SCD, and SCD5). Regarding biological processes, the genes upregulated in G2 were related to cholesterol biosynthesis (EBP, CYP51A1, DHCR24, and LSS), unsaturated fatty acid biosynthesis (FADS2, SCD, SCD5, and FADS1), and insulin sensitivity (INSIG1 and LPIN2). Cow-calf supplementation G2 positively affected energy metabolism and lipid biosynthesis, and thus favored the deposition of marbling fat during the postweaning period, which was shown here in an unprecedented way, by analyzing the transcriptome, genes, pathways, and enriched processes due to the use of creep feeding.

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Beef is a source of essential fatty acids (EFA), linoleic (LA) and alpha-linolenic (ALA) acids, which protect against inflammatory and cardiovascular diseases in humans. However, the intramuscular EFA profile in cattle is a complex and polygenic trait. Thus, this study aimed to identify potential regulatory genes of the essential fatty acid profile in Longissimus thoracis of Nellore cattle finished in feedlot. Forty-four young bulls clustered in four groups of fifteen animals with extreme values for each FA were evaluated through differentially expressed genes (DEG) analysis and two co-expression methodologies (WGCNA and PCIT). We highlight the ECHS1, IVD, ASB5, and ERLIN1 genes and the TF NFIA, indicated in both FA. Moreover, we associate the NFYA, NFYB, PPARG, FASN, and FADS2 genes with LA, and the RORA and ELOVL5 genes with ALA. Furthermore, the functional enrichment analysis points out several terms related to FA metabolism. These findings contribute to our understanding of the genetic mechanisms underlying the beef EFA profile in Nellore cattle finished in feedlot.

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The beef fatty acid (FA) profile has the potential to impact human health, and displays polygenic and complex features. This study aimed to identify the transcriptomic FA profile in the longissimus thoracis muscle in Nellore beef cattle finished in feedlot. Forty-four young bulls were sampled to assess the beef FA profile by considering 14 phenotypes and including differentially expressed genes (DEG), co-expressed (COE), and differentially co-expressed genes (DCO) analyses. All samples (n = 44) were used for COE analysis, whereas 30 samples with extreme phenotypes for the beef FA profile were used for DEG and DCO. A total of 912 DEG were identified, and the polyunsaturated (n = 563) and unsaturated ω-3 (n = 346) FA sums groups were the most frequently observed. The COE analyses identified three modules, of which the blue module (n = 1776) was correlated with eight of 14 FA phenotypes. Also, 759 DCO genes were listed, and the oleic acid (n = 358) and monounsaturated fatty acids sum (n = 120) were the most frequent. Furthermore, 243 and 13, 319 and seven, and 173 and 12 gene ontology terms and Kyoto Encyclopedia of Genes and Genomes pathways were enriched respectively for the DEG, COE, and DCO analyses. Combining the results, we highlight the unexplored GIPC2, ASB5, and PPP5C genes in cattle. Besides LIPE and INSIG2 genes in COE modules, the ACSL3, ECI1, DECR2, FITM1, and SDHB genes were signaled in at least two analyses. These findings contribute to understand the genetic mechanisms underlying the beef FA profile in Nellore beef cattle finished in feedlot.

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The position and number of hair whorls have been associated with the behavior, temperament, and laterality of horses. The easy observation of whorls assists in the prediction of reactivity, and thus permits the development of better measures of handling, training, mounting, and riding horses. However, little is known about the genetics involved in the formation of hair whorls. Therefore, the aim of this study was to perform a genome-wide association analysis to identify chromosome regions and candidate genes associated with hair whorl traits. Data from 342 Quarter Horses genotyped for approximately 53,000 SNPs were used in an association study using a single-step procedure. The following traits were analyzed: vertical position of hair whorl on the head, number of whorls on the head, and number of whorls on the left and right sides of the neck. The traits had between one and three genomic windows associated. Each of them explained at least 4% of the additive variance. The windows accounted for 20-80% of additive variance for each trait analyzed. Many of the prospected genes are related to hair follicle growth. Some of these genes exert a pleiotropic effect on neurological and behavioral traits. This is the first indication of biological and physiological activity that might explain the association of hair whorls and temperament.

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Dental classification of carcasses is used as a parameter of cattle maturity at slaughter, and it can influence carcass and meat quality traits. Brazilian beef-packing companies use the number of permanent incisor (PI) teeth as a parameter for bonus and certification of carcasses with superior quality. However, when non-castrated male such as F1 Angus-Nellore (Bos taurus×Bos indicus) are slaughtered, only animals without PI teeth are subsidized by the breed association. We evaluated these animals finished in feedlot for 180 days with zero versus two PI teeth on the carcass and meat quality traits. At the time of slaughter, 88 carcasses were selected, forming two treatments according to dental carcass maturity (0 versus 2 PI teeth; 44 animals per category). It was demonstrated that the number of PI teeth (0 versus 2 PI) did not influence (p>0.05) carcass (weights, yield, cooling loss, ribeye area and the backfat thickness) and meat quality traits (Longissimus thoracis chemical composition, color, cooking losses, shear force and pH). Thus, dental carcass maturity (zero versus two PI teeth) does not influence non-castrated male F1 Angus-Nellore finished in feedlot for 180 days. This is the first study to demonstrate that carcasses of non-castrated male F1 Angus-Nellore with two PI teeth should be subsidized in a similar way to those with zero PI teeth. Moreover, Brazilian beef-packing companies could produce heavier and leaner carcasses of acceptable quality though the use of crossbred cattle such as non-castrated F1 Angus Nellore.

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The aim of this study was to estimate the (co)variance components and breeding values for birthweight (BW) in Nellore cattle by considering or not identical weights that exhibit a high frequency within the contemporary group (CG). A total of 175,258 BW records of Nellore cattle born between 2002 and 2018 were used. The CG was formed by farm, year of birth, sex and feeding regime at birth. CGs with more than 16% of identical BW values were eliminated, generating a data file called BWd. Another file was created without removing these animals (BWt). A mixed linear model was used for statistical analysis, which included fixed and random effects. In both data files analysed, single-trait analysis was performed by Bayesian inference. The mean direct and maternal heritability for BW and the correlation between direct and maternal effects were 0.27, 0.07 and -0.07 for BWt, respectively, and 0.30, 0.093 and -0.07 for BWd. This method should affect the estimation of genetic merits of animals for BW, providing greater safety in the choice of sires.

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Runs of homozygosity (ROH) are contiguous homozygous regions of the genome. These regions can be used to identify genes associated with traits of economic interest, as well as inbreeding levels. The aim of the present study was to analyse the length and distribution of ROH islands in Gyr cattle and to identify genes within these regions. A population of 173 animals selected for beef production and a population of 291 animals selected for dairy production were used. Differences in the number of short ROH (ROH1-2 Mb ) were observed between the two populations, while the number of long ROH (ROH>16 Mb ) was similar. ROH islands with the highest incidences (>0.50) overlapped in several segments of the genome in the two populations. The genes identified were associated with milk production, growth, reproduction, immune response and resistance traits. Our results contribute to the understanding of how selection can shape the distribution of ROH and ROH islands within the same breed when animals are selected for different purposes such as dairy or beef production.

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Gir is one of the main cattle breeds raised in tropical South American countries. Strong artificial selection through its domestication resulted in increased genetic differentiation among the countries in recent years. Over the years, genomic studies in Gir have become more common. However, studies of population structure and signatures of selection in divergent Gir populations are scarce and need more attention to better understand genetic differentiation, gene flow, and genetic distance. Genotypes of 173 animals selected for growth traits and 273 animals selected for milk production were used in this study. Clear genetic differentiation between beef and dairy populations was observed. Different criteria led to genetic divergence and genetic differences in allele frequencies between the two populations. Gene segregation in each population was forced by artificial selection, promoting isolation, and increasing genetic variation between them. Results showed evidence of selective forces in different regions of the genome. A total of 282 genes were detected under selection in the test population based on the fixation index (Fst), integrated haplotype score (iHS), and cross-population extend haplotype homozygosity (XP-EHH) approaches. The QTL mapping identified 35 genes associated with reproduction, milk composition, growth, meat and carcass, health, or body conformation traits. The investigation of genes and pathways showed that quantitative traits associated to fertility, milk production, beef quality, and growth were involved in the process of differentiation of these populations. These results would support further investigations of population structure and differentiation in the Gir breed.

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Some horse breeds are highly selected for athletic activities. The athletic potential of each animal can be measured by its performance in sports. High athletic performance depends on the animal capacity to produce energy through aerobic and anaerobic metabolic pathways, among other factors. Transmembrane proteins called monocarboxylate transporters, mainly the isoform 1 (MCT1) and its ancillary protein CD147, can help the organism to adapt to physiological stress caused by physical exercise, transporting lactate and H+ ions. Horse breeds are selected for different purposes so we might expect differences in the amount of those proteins and in the genotypic frequencies for genes that play a significant role in the performance of the animals. The study of MCT1 and CD147 gene polymorphisms, which can affect the formation of the proteins and transport of lactate and H+, can provide enough information to be used for selection of athletic horses increasingly resistant to intense exercise. Two other candidate genes, the PDK4 and DMRT3, have been associated with athletic potential and indicated as possible markers for performance in horses. The oxidation of fatty acids is highly effective in generating ATP and is controlled by the expression of PDK4 (pyruvate dehydrogenase kinase, isozyme 4) in skeletal muscle during and after exercise. The doublesex and mab-3 related transcription factor 3 (DMRT3) gene encodes an important transcription factor in the setting of spinal cord circuits controlling movement in vertebrates and may be associated with gait performance in horses. This review describes how the monocarboxylate transporters work during physical exercise in athletic horses and the influence of polymorphisms in candidate genes for athletic performance in horses.(AU)

Algumas raças de equinos são altamente selecionadas para atividades desportivas. O potencial atlético de cada animal pode ser medido pelo seu desempenho nas competições equestres. Um alto potencial atlético depende, entre outros fatores, da capacidade do animal de produzir energia através dos metabolismos aeróbio e anaeróbio. As proteínas transmembrana chamadas transportadores de monoxarboxilato, principalmente a isoforma 1 (MCT1) e sua proteína auxiliar CD147, podem ajudam o organismo a se adaptar ao estresse fisiológico causado pelo exercício físico, transportando íons lactato e H+. Algumas raças de equinos são selecionadas para diferentes objetivos, portanto é provável que existam diferenças nas quantidades de transportadores monocarboxilatos e na frequência genotípica dos seus respectivos genes. O estudo de polimorfismos nos genes das proteínas MCT1 e CD147, afetando a sua formação e o transporte dos íons lactato e H+, podem fornecer informações suficientes para a seleção de equinos com capacidade de serem altamente treinados e resistentes a intensos exercícios. Dois outros genes candidatos que têm sido relacionados com potencial atlético e utilizados como possíveis marcadores para desempenho em equinos são o PDK4 e o DMRT3. A oxidação de ácidos graxos é altamente efetiva para produção de ATP e é controlada pela expressão do gene PDK4 (pyruvate dehydrogenase kinase, isozyme 4) no musculo esquelético durante e após do exercício físico. O gene DMRT3 (doublesex and mab-3 related transcription factor 3) codifica um importante fator de transcrição no controle dos movimentos em vertebrados e pode ser associado com a marcha em algumas raças de equinos. Esta revisão descreve como agem os transportadores de monocarboxilatos durante o exercício físico em equinos atletas e qual a influência de alguns polimorfismos em genes candidatos para o desempenho atlético em equinos.(AU)

Assuntos

RESUMO

Some horse breeds are highly selected for athletic activities. The athletic potential of each animal can be measured by its performance in sports. High athletic performance depends on the animal capacity to produce energy through aerobic and anaerobic metabolic pathways, among other factors. Transmembrane proteins called monocarboxylate transporters, mainly the isoform 1 (MCT1) and its ancillary protein CD147, can help the organism to adapt to physiological stress caused by physical exercise, transporting lactate and H+ ions. Horse breeds are selected for different purposes so we might expect differences in the amount of those proteins and in the genotypic frequencies for genes that play a significant role in the performance of the animals. The study of MCT1 and CD147 gene polymorphisms, which can affect the formation of the proteins and transport of lactate and H+, can provide enough information to be used for selection of athletic horses increasingly resistant to intense exercise. Two other candidate genes, the PDK4 and DMRT3, have been associated with athletic potential and indicated as possible markers for performance in horses. The oxidation of fatty acids is highly effective in generating ATP and is controlled by the expression of PDK4 (pyruvate dehydrogenase kinase, isozyme 4) in skeletal muscle during and after exercise. The doublesex and mab-3 related transcription factor 3 (DMRT3) gene encodes an important transcription factor in the setting of spinal cord circuits controlling movement in vertebrates and may be associated with gait performance in horses. This review describes how the monocarboxylate transporters work during physical exercise in athletic horses and the influence of polymorphisms in candidate genes for athletic performance in horses.(AU)

Algumas raças de equinos são altamente selecionadas para atividades desportivas. O potencial atlético de cada animal pode ser medido pelo seu desempenho nas competições equestres. Um alto potencial atlético depende, entre outros fatores, da capacidade do animal de produzir energia através dos metabolismos aeróbio e anaeróbio. As proteínas transmembrana chamadas transportadores de monoxarboxilato, principalmente a isoforma 1 (MCT1) e sua proteína auxiliar CD147, podem ajudam o organismo a se adaptar ao estresse fisiológico causado pelo exercício físico, transportando íons lactato e H+. Algumas raças de equinos são selecionadas para diferentes objetivos, portanto é provável que existam diferenças nas quantidades de transportadores monocarboxilatos e na frequência genotípica dos seus respectivos genes. O estudo de polimorfismos nos genes das proteínas MCT1 e CD147, afetando a sua formação e o transporte dos íons lactato e H+, podem fornecer informações suficientes para a seleção de equinos com capacidade de serem altamente treinados e resistentes a intensos exercícios. Dois outros genes candidatos que têm sido relacionados com potencial atlético e utilizados como possíveis marcadores para desempenho em equinos são o PDK4 e o DMRT3. A oxidação de ácidos graxos é altamente efetiva para produção de ATP e é controlada pela expressão do gene PDK4 (pyruvate dehydrogenase kinase, isozyme 4) no musculo esquelético durante e após do exercício físico. O gene DMRT3 (doublesex and mab-3 related transcription factor 3) codifica um importante fator de transcrição no controle dos movimentos em vertebrados e pode ser associado com a marcha em algumas raças de equinos. Esta revisão descreve como agem os transportadores de monocarboxilatos durante o exercício físico em equinos atletas e qual a influência de alguns polimorfismos em genes candidatos para o desempenho atlético em equinos.(AU)

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The objective of this study was to estimate allele frequencies of the g.98535683A>G:BTAU7 SNP in the CAST gene in different genetic groups of beef cattle produced in Brazil (Nellore and their crosses with Bos taurus), and to evaluate associations between this polymorphism and meat traits. Five hundred animals from six different genetic groups were genotyped and phenotyped for shear force (SF), myofibrillar fragmentation index (MFI), rib eye area, backfat thickness, and total lipids. Alleles A and G of the SNP were detected in all genetic groups and the frequency of A was higher than G. Significant association (P<0.05) was observed between the polymorphism and meat tenderness (SF and MFI), in which genotype AA exhibited the best values. These results demonstrate for the first time the occurrence of the studied SNP in a Zebu breed and its potential application to the genetic improvement of meat tenderness in the Nellore breed (Bos indicus) and its crosses with Bos taurus.

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ABSTRACT: Some horse breeds are highly selected for athletic activities. The athletic potential of each animal can be measured by its performance in sports. High athletic performance depends on the animal capacity to produce energy through aerobic and anaerobic metabolic pathways, among other factors. Transmembrane proteins called monocarboxylate transporters, mainly the isoform 1 (MCT1) and its ancillary protein CD147, can help the organism to adapt to physiological stress caused by physical exercise, transporting lactate and H+ ions. Horse breeds are selected for different purposes so we might expect differences in the amount of those proteins and in the genotypic frequencies for genes that play a significant role in the performance of the animals. The study of MCT1 and CD147 gene polymorphisms, which can affect the formation of the proteins and transport of lactate and H+, can provide enough information to be used for selection of athletic horses increasingly resistant to intense exercise. Two other candidate genes, the PDK4 and DMRT3, have been associated with athletic potential and indicated as possible markers for performance in horses. The oxidation of fatty acids is highly effective in generating ATP and is controlled by the expression of PDK4 (pyruvate dehydrogenase kinase, isozyme 4) in skeletal muscle during and after exercise. The doublesex and mab-3 related transcription factor 3 (DMRT3) gene encodes an important transcription factor in the setting of spinal cord circuits controlling movement in vertebrates and may be associated with gait performance in horses. This review describes how the monocarboxylate transporters work during physical exercise in athletic horses and the influence of polymorphisms in candidate genes for athletic performance in horses.

RESUMO: Algumas raças de equinos são altamente selecionadas para atividades desportivas. O potencial atlético de cada animal pode ser medido pelo seu desempenho nas competições equestres. Um alto potencial atlético depende, entre outros fatores, da capacidade do animal de produzir energia através dos metabolismos aeróbio e anaeróbio. As proteínas transmembrana chamadas transportadores de monoxarboxilato, principalmente a isoforma 1 (MCT1) e sua proteína auxiliar CD147, podem ajudam o organismo a se adaptar ao estresse fisiológico causado pelo exercício físico, transportando íons lactato e H+. Algumas raças de equinos são selecionadas para diferentes objetivos, portanto é provável que existam diferenças nas quantidades de transportadores monocarboxilatos e na frequência genotípica dos seus respectivos genes. O estudo de polimorfismos nos genes das proteínas MCT1 e CD147, afetando a sua formação e o transporte dos íons lactato e H+, podem fornecer informações suficientes para a seleção de equinos com capacidade de serem altamente treinados e resistentes a intensos exercícios. Dois outros genes candidatos que têm sido relacionados com potencial atlético e utilizados como possíveis marcadores para desempenho em equinos são o PDK4 e o DMRT3. A oxidação de ácidos graxos é altamente efetiva para produção de ATP e é controlada pela expressão do gene PDK4 (pyruvate dehydrogenase kinase, isozyme 4) no musculo esquelético durante e após do exercício físico. O gene DMRT3 (doublesex and mab-3 related transcription factor 3) codifica um importante fator de transcrição no controle dos movimentos em vertebrados e pode ser associado com a marcha em algumas raças de equinos. Esta revisão descreve como agem os transportadores de monocarboxilatos durante o exercício físico em equinos atletas e qual a influência de alguns polimorfismos em genes candidatos para o desempenho atlético em equinos.

RESUMO

La utilización de marcadores moleculares trae gran progreso para el mejoramiento genético de especies comerciales destinadas a la producción, como bovinos, porcinos y aves, principalmente con el aumento de la precisión de predicciones de valores genéticos y rapidez en la selección de animales superiores. Esto ocurrió por medio del uso de algunos pocos marcadores ligados a Locus de Características Cuantitativas QTL (Selección Asistida por Marcadores) o por la estimación de efectos de millones de ellos simultáneamente (Estudio de asociación del Genoma Completo GWAS o asociación Genómica GS). Sin embargo, en otras especies domésticas, incluyendo los equinos, el empleo de esta biotecnología aun es poco explorado. Los primeros estudios para identificar variantes genéticas ligadas a mejores desempeños en carreras fueron realizados recientemente en la raza Pura Sangre Ingles (PSI), resultando en la implantación de pruebas genéticas que auxilian a los criadores en la selección de animales con mayor potencial genético. Esta revisión tiene por objetivo describir la situación actual de los marcadores moleculares aplicados a los caballos de carrera y las perspectivas del uso en el mejoramiento genético de equinos de carrera Cuarto de Milla, raza de gran importancia en el mundo y también en Brasil.(AU)

The use of molecular markers has brought great progress to genetic breeding programs of commercial species aimed at production, such as cattle, pigs and poultry, especially with the increase of the accuracy of prediction of breeding values, allowing early selection of better animals. This occurred either through the use of a few markers linked to Locos of Quantitative Trait QTL (marker-assisted selection) or the estimation of the effects of thousands of them simultaneously (Genome Wide Association Studies GWAS or Genomic Selection GS). However, in other domestic species, including equine, the use of this biotechnology remains underexplored. The first studies to identify genetic variants linked to better performance in races were performed with Thoroughbred horses, resulting in the implementation of genetic tests that assist breeders in selecting animals with greater genetic potential. The objective of this review was to describe the current status of molecular markers applied to racehorses and prospects of their use in genetic improvement of racing Quarter Horses, an important breed in the world and also in Brazil.(AU)

A utilização de marcadores moleculares trouxe grande progresso ao melhoramento genético de espécies comerciais destinados a produção, como bovinos, suínos e aves, principalmente com o aumento da acurácia de predição de valores genéticos e precocidade na seleção de animais superiores. Isto ocorreu por meio do uso de alguns poucos marcadores ligados a Locos de Características Quantitativas QTL (Seleção Assistida por Marcadores) ou pela estimação de efeitos de milhares deles simultaneamente (Estudos de Ampla Associação do Genoma GWAS ou Seleção Genômica GS). Por outro lado, em outras espécies domésticas, incluindo os equinos, o emprego desta biotecnologia ainda é pouco explorado. Os primeiros estudos a identificar variantes genéticas ligadas a melhores desempenhos em corridas foram realizados recentemente na raça Puro-Sangue Inglês (PSI), resultando na implantação de testes genéticos que auxiliam criadores na seleção de animais com maior potencial genético. Esta revisão tem por objetivo descrever a atual situação dos marcadores moleculares aplicados à cavalos de corrida e as perspectivas do seu uso no melhoramento genético de equinos de corrida Quarto de Milha, raça de grande importância no mundo e também no Brasil.(AU)

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The aim of this study was to estimate the environmental effects (calving age, julian date of birth and weaning age) on the adjusted weights to 120 (P120) and 205 (P205) days of crossbred cattle Angus x Nelore. The database was formed with information from 11,271 animals, borned from 1987 to 2004. Maternal heterozygosity proportions were equal to 0.0, 0.375, 0.4688, 0.5, 0.75 and 1.0. The weights, P120 and P210, were standardized based on the weight daily gain by interpolation of the weighing close to the standardized age and weight measured previously. The (co) variance components and genetic parameters were obtained by Bayesian inference analyzes performed with three statistical models, differing as to the environmental effects. Breeding values were obtained for three models and were compared by Spearman correlations and by percentage of selected bulls in common. Heritability estimates values obtained in the best model was 0.20 for both traits (P120 and P205). Study of genetic values showed changes in the classification of animals according to models. Inclusion of julian date class of birth, age class of the animal in the measurement and interaction of calving age class and maternal heterozygosity in the selection of parents was important to allow greater precision in genetic evaluation of herd.

O objetivo com este trabalho foi estimar efeitos de ambiente (idade da vaca ao parto, data juliana de nascimento e idade do bezerro à desmama) sobre os pesos ajustados aos 120 (P120) e 205 (P205) dias de idade em bovinos mestiços Angus x Nelore. O banco de dados foi formado com informações de 11.271 animais, nascidos no período de 1987 a 2004. Os animais eram filhos de matrizes com proporções de heterozigoses iguais a 0,0; 0,375; 0,4688; 0,5; 0,75 e 1,0. Os pesos, P120 e P210, foram padronizados com base no ganho diário de peso por meio da interpolação da pesagem próxima a idade a ser padronizada e do peso mensurado anteriormente. Para obtenção dos componentes de (co)variância e parâmetros genéticos das características, análises sob inferência bayesiana foram realizadas com três modelos estatísticos, diferindo quanto aos efeitos ambientais. Os valores genéticos foram obtidos para os três modelos e foram comparados por correlações de ordem Spearman e pela porcentagem de touros selecionados em comum. Os valores das estimativas de herdabilidade a posteriori obtidos no melhor modelo foi 0,20 para ambas as características (P120 e P205). O estudo dos valores genéticos mostrou alterações na classificação dos animais de acordo com os modelos. A inclusão de classe de data juliana ao nascimento, classe de idade da mensuração e interação da classe de idade da mãe ao parto e da heterozigos

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RESUMO

The aim of this study was to estimate the environmental effects (calving age, julian date of birth and weaning age) on the adjusted weights to 120 (P120) and 205 (P205) days of crossbred cattle Angus x Nelore. The database was formed with information from 11,271 animals, borned from 1987 to 2004. Maternal heterozygosity proportions were equal to 0.0, 0.375, 0.4688, 0.5, 0.75 and 1.0. The weights, P120 and P210, were standardized based on the weight daily gain by interpolation of the weighing close to the standardized age and weight measured previously. The (co) variance components and genetic parameters were obtained by Bayesian inference analyzes performed with three statistical models, differing as to the environmental effects. Breeding values were obtained for three models and were compared by Spearman correlations and by percentage of selected bulls in common. Heritability estimates values obtained in the best model was 0.20 for both traits (P120 and P205). Study of genetic values showed changes in the classification of animals according to models. Inclusion of julian date class of birth, age class of the animal in the measurement and interaction of calving age class and maternal heterozygosity in the selection of parents was important to allow greater precision in genetic evaluation of herd.(AU)

O objetivo com este trabalho foi estimar efeitos de ambiente (idade da vaca ao parto, data juliana de nascimento e idade do bezerro à desmama) sobre os pesos ajustados aos 120 (P120) e 205 (P205) dias de idade em bovinos mestiços Angus x Nelore. O banco de dados foi formado com informações de 11.271 animais, nascidos no período de 1987 a 2004. Os animais eram filhos de matrizes com proporções de heterozigoses iguais a 0,0; 0,375; 0,4688; 0,5; 0,75 e 1,0. Os pesos, P120 e P210, foram padronizados com base no ganho diário de peso por meio da interpolação da pesagem próxima a idade a ser padronizada e do peso mensurado anteriormente. Para obtenção dos componentes de (co)variância e parâmetros genéticos das características, análises sob inferência bayesiana foram realizadas com três modelos estatísticos, diferindo quanto aos efeitos ambientais. Os valores genéticos foram obtidos para os três modelos e foram comparados por correlações de ordem Spearman e pela porcentagem de touros selecionados em comum. Os valores das estimativas de herdabilidade a posteriori obtidos no melhor modelo foi 0,20 para ambas as características (P120 e P205). O estudo dos valores genéticos mostrou alterações na classificação dos animais de acordo com os modelos. A inclusão de classe de data juliana ao nascimento, classe de idade da mensuração e interação da classe de idade da mãe ao parto e da heterozigos(AU)

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RESUMO

La utilización de marcadores moleculares trae gran progreso para el mejoramiento genético de especies comerciales destinadas a la producción, como bovinos, porcinos y aves, principalmente con el aumento de la precisión de predicciones de valores genéticos y rapidez en la selección de animales superiores. Esto ocurrió por medio del uso de algunos pocos marcadores ligados a Locus de Características Cuantitativas QTL (Selección Asistida por Marcadores) o por la estimación de efectos de millones de ellos simultáneamente (Estudio de asociación del Genoma Completo GWAS o asociación Genómica GS). Sin embargo, en otras especies domésticas, incluyendo los equinos, el empleo de esta biotecnología aun es poco explorado. Los primeros estudios para identificar variantes genéticas ligadas a mejores desempeños en carreras fueron realizados recientemente en la raza Pura Sangre Ingles (PSI), resultando en la implantación de pruebas genéticas que auxilian a los criadores en la selección de animales con mayor potencial genético. Esta revisión tiene por objetivo describir la situación actual de los marcadores moleculares aplicados a los caballos de carrera y las perspectivas del uso en el mejoramiento genético de equinos de carrera Cuarto de Milla, raza de gran importancia en el mundo y también en Brasil.

The use of molecular markers has brought great progress to genetic breeding programs of commercial species aimed at production, such as cattle, pigs and poultry, especially with the increase of the accuracy of prediction of breeding values, allowing early selection of better animals. This occurred either through the use of a few markers linked to Locos of Quantitative Trait QTL (marker-assisted selection) or the estimation of the effects of thousands of them simultaneously (Genome Wide Association Studies GWAS or Genomic Selection GS). However, in other domestic species, including equine, the use of this biotechnology remains underexplored. The first studies to identify genetic variants linked to better performance in races were performed with Thoroughbred horses, resulting in the implementation of genetic tests that assist breeders in selecting animals with greater genetic potential. The objective of this review was to describe the current status of molecular markers applied to racehorses and prospects of their use in genetic improvement of racing Quarter Horses, an important breed in the world and also in Brazil.

A utilização de marcadores moleculares trouxe grande progresso ao melhoramento genético de espécies comerciais destinados a produção, como bovinos, suínos e aves, principalmente com o aumento da acurácia de predição de valores genéticos e precocidade na seleção de animais superiores. Isto ocorreu por meio do uso de alguns poucos marcadores ligados a Locos de Características Quantitativas QTL (Seleção Assistida por Marcadores) ou pela estimação de efeitos de milhares deles simultaneamente (Estudos de Ampla Associação do Genoma GWAS ou Seleção Genômica GS). Por outro lado, em outras espécies domésticas, incluindo os equinos, o emprego desta biotecnologia ainda é pouco explorado. Os primeiros estudos a identificar variantes genéticas ligadas a melhores desempenhos em corridas foram realizados recentemente na raça Puro-Sangue Inglês (PSI), resultando na implantação de testes genéticos que auxiliam criadores na seleção de animais com maior potencial genético. Esta revisão tem por objetivo descrever a atual situação dos marcadores moleculares aplicados à cavalos de corrida e as perspectivas do seu uso no melhoramento genético de equinos de corrida Quarto de Milha, raça de grande importância no mundo e também no Brasil.

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RESUMO

Embora os equinos tenham participado da formação e do desenvolvimento de várias civilizações no mundo todo desde sua domesticação há 6.000 anos, em relação a outras espécies de interesse zootécnico, poucas pesquisas vêm sendo realizadas na área de melhoramento genético, especialmente no Brasil. Dificuldades inerentes à espécie e em função de aspectos operacionais têm sido alguns dos contratempos. No entanto, avanços na genética ao longo das últimas décadas contribuíram para o melhor entendimento de características relacionadas à reprodução, à saúde, ao comportamento e ao desempenho dos animais domésticos, incluindo os equinos. Tecnologias recentes como os métodos de sequenciamento de última geração e os chips de genotipagem de SNPs de alta densidade permitiram progresso nas pesquisas até então realizadas, as quais se utilizavam basicamente da estratégia do gene candidato, proporcionando a identificação de regiões genômicas relacionadas à patias e síndromes e, mais recentemente, a desempenho em provas esportivas e aptidões específicas. Pela utilização dessas ferramentas de análise do genoma, regiões relacionadas ao desempenho em corridas vêm sendo identificadas, e a partir dessas informações, testes genéticos para a seleção de indivíduos superiores para desempenho em corridas começam a ser disponibilizados no mercado.(AU)

Although equines have participated in the forming and development of several civilizations around the world since their domestication 6,000 years ago in comparison to other species that have zootechnical interest, few researches have been done related to animal breeding area, especially in Brazil. Some reasons for that are difficulties associated with the species as well as operational aspects. However, developments in genetics in the last decades contributed to a better understanding of the traits related to reproduction, heath, behavior and performance of domestic animals, including equines. Recent technologies as next generation sequencing methods and the high density chips of SNPs for genotyping allowed some advances in the researches already done. These researches used basically the candidate gene strategy, and identified genomic regions related to diseases and syndromes and, more recently, the performance in sport competition and specific abilities. Using these genomic analysis tools, some regions related to race performance have been identified and based on this information; genetic tests to select superior animals for racing performance have started to be available in the market.(AU)

Assuntos

RESUMO

Embora os equinos tenham participado da formação e do desenvolvimento de várias civilizações no mundo todo desde sua domesticação há 6.000 anos, em relação a outras espécies de interesse zootécnico, poucas pesquisas vêm sendo realizadas na área de melhoramento genético, especialmente no Brasil. Dificuldades inerentes à espécie e em função de aspectos operacionais têm sido alguns dos contratempos. No entanto, avanços na genética ao longo das últimas décadas contribuíram para o melhor entendimento de características relacionadas à reprodução, à saúde, ao comportamento e ao desempenho dos animais domésticos, incluindo os equinos. Tecnologias recentes como os métodos de sequenciamento de última geração e os chips de genotipagem de SNPs de alta densidade permitiram progresso nas pesquisas até então realizadas, as quais se utilizavam basicamente da estratégia do gene candidato, proporcionando a identificação de regiões genômicas relacionadas à patias e síndromes e, mais recentemente, a desempenho em provas esportivas e aptidões específicas. Pela utilização dessas ferramentas de análise do genoma, regiões relacionadas ao desempenho em corridas vêm sendo identificadas, e a partir dessas informações, testes genéticos para a seleção de indivíduos superiores para desempenho em corridas começam a ser disponibilizados no mercado.

Although equines have participated in the forming and development of several civilizations around the world since their domestication 6,000 years ago in comparison to other species that have zootechnical interest, few researches have been done related to animal breeding area, especially in Brazil. Some reasons for that are difficulties associated with the species as well as operational aspects. However, developments in genetics in the last decades contributed to a better understanding of the traits related to reproduction, heath, behavior and performance of domestic animals, including equines. Recent technologies as next generation sequencing methods and the high density chips of SNPs for genotyping allowed some advances in the researches already done. These researches used basically the candidate gene strategy, and identified genomic regions related to diseases and syndromes and, more recently, the performance in sport competition and specific abilities. Using these genomic analysis tools, some regions related to race performance have been identified and based on this information; genetic tests to select superior animals for racing performance have started to be available in the market.

Assuntos