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1.
J Comput Biol ; 25(12): 1285-1300, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30251882

RESUMO

In vitro experiments were conducted in this work to analyze the proliferation of tumor (DU-145) and normal (macrophage RAW 264.7) cells under the influence of a chemotherapeutic drug (doxorubicin). Approximate Bayesian Computation (ABC) was used to select among four competing models to represent the number of cells and to estimate the model parameters, based on the experimental data. For one case, the selected model was validated in a replicated experiment, through the solution of a state estimation problem with a particle filter algorithm, thus demonstrating the robustness of the ABC procedure used in this work.


Assuntos
Antineoplásicos/farmacologia , Proliferação de Células/efeitos dos fármacos , Doxorrubicina/farmacologia , Modelos Teóricos , Neoplasias da Próstata/patologia , Animais , Linhagem Celular Tumoral , Resistencia a Medicamentos Antineoplásicos , Humanos , Masculino , Camundongos , Células RAW 264.7
2.
J Comput Biol ; 22(7): 649-65, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-25973723

RESUMO

Cancer is characterized by the uncontrolled growth of cells with the ability of invading local organs and/or tissues and of spreading to other sites. Several kinds of mathematical models have been proposed in the literature, involving different levels of refinement, for the evolution of tumors and their interactions with chemotherapy drugs. In this article, we present the solution of a state estimation problem for tumor size evolution. A system of nonlinear ordinary differential equations is used as the state evolution model, which involves as state variables the numbers of tumor, normal and angiogenic cells, as well as the masses of the chemotherapy and anti-angiogenic drugs in the body. Measurements of the numbers of tumor and normal cells are considered available for the inverse analysis. Parameters appearing in the formulation of the state evolution model are treated as Gaussian random variables and their uncertainties are taken into account in the estimation of the state variables, by using an algorithm based on the auxiliary sampling importance resampling particle filter. Test cases are examined in the article dealing with a chemotherapy protocol for pancreatic cancer.


Assuntos
Neoplasias/patologia , Algoritmos , Antimetabólitos Antineoplásicos/farmacocinética , Simulação por Computador , Desoxicitidina/análogos & derivados , Desoxicitidina/farmacocinética , Diagnóstico por Computador , Meia-Vida , Humanos , Modelos Biológicos , Método de Monte Carlo , Neoplasias/tratamento farmacológico , Carga Tumoral , Gencitabina
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