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1.
Parasit Vectors ; 17(1): 390, 2024 Sep 13.
Artículo en Inglés | MEDLINE | ID: mdl-39272159

RESUMEN

BACKGROUND: Soil-transmitted helminths infect an estimated 18% of the world's population, causing a significant health burden. Microscopy has been the primary tool for diagnosing eggs from fecal samples, but its sensitivity drops in low-prevalence settings. Quantitative real-time polymerase chain reaction (qPCR) is slowly increasing in research and clinical settings. However, there is still no consensus on preferred qPCR targets. METHODS: We aimed to compare soil-transmitted helminth (STH) DNA detection methods by testing naïve stool samples spiked with known quantities of STH eggs and larvae. DNA extracts from spiked samples were tested using independent quantitative realtime PCR (qPCR) assays targeting ribosomal or putative non-protein coding satellite sequences. RESULTS: For Trichuris trichiura, there was a strong correlation between egg/larvae counts and qPCR results using either qPCR method (0.86 and 0.87, respectively). Strong correlations also existed for A. lumbricoides (0.60 and 0.63, respectively), but weaker correlations were found for Ancylostoma duodenale (0.41 for both assays) and Strongyloides stercoralis (0.48 and 0.65, respectively). No correlation for Necator americanus was observed when testing with either qPCR assay. Both assays had fair-to-moderate agreement across targets when using field-collected stool samples (0.28-0.45, for all STHs), except for S. stercoralis (0.12) with slight agreement. CONCLUSIONS: There is a strong correlation between qPCR results and egg/larvae counts. Our study confirms that qPCR is an effective diagnostic tool, even with low-intensity infections, regardless of the DNA-based diagnostic marker used. However, the moderate agreement between the two different qPCR assays when testing field samples highlights the need to understand the role of these targets in the genome so that the parasite burden can be quantified more accurately and consistently by qPCR.


Asunto(s)
ADN de Helmintos , Heces , Helmintiasis , Helmintos , Reacción en Cadena en Tiempo Real de la Polimerasa , Suelo , Heces/parasitología , Animales , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Humanos , ADN de Helmintos/genética , Suelo/parasitología , Helmintiasis/diagnóstico , Helmintiasis/parasitología , Helmintos/genética , Helmintos/aislamiento & purificación , Helmintos/clasificación , Recuento de Huevos de Parásitos/métodos , Sensibilidad y Especificidad , Trichuris/aislamiento & purificación , Trichuris/genética
2.
Parasitol Res ; 123(9): 312, 2024 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-39218957

RESUMEN

Abdominal angiostrongyliasis (AA) is a zoonotic and severe parasitic infection caused by Angiostrongylus costaricensis. AA is currently diagnosed by the observation of A. costaricensis-compatible structures in biopsies or the detection of antibodies in serological tests. However, molecular methods targeting homologous sequences of A. costaricensis have not been designed before, and therefore, an HRM-coupled qPCR was developed to detect the internal transcribed spacer 1 (ITS1) of the parasite. The present assay successfully amplified DNA of A. costaricensis obtained from different hosts and identified slight sequence differences through the HRM analysis. The detection limit of the HRM-qPCR was 0.00036 ng/µL, 1.0 ng/µL, and 0.1 ng/µL when A. costaricensis DNA was diluted in nuclease-free water, whole blood, and sera, respectively, which highlights its potential use for cell-free DNA detection. Moreover, the reaction did not cross-amplify DNA of Angiostrongylus cantonensis, Strongyloides stercoralis, and other nematodes, thus emphasizing its specificity. Additionally, the assay tested positive in formalin-fixed paraffin embedded biopsies with visible A. costaricensis adults or eggs, but not in samples without evident parasites or a low number of larvae, which suggests that the reaction is useful for confirming the presence of the nematode in clinical samples. Finally, DNA of sera from patients with AA was evaluated with the HRM-qPCR but none tested positive, possibly due to long storage periods of the samples which could have led to cfDNA degradation. These results indicate that this assay may be useful in the confirmation of AA and its prospection for cell-free DNA detection protocols.


Asunto(s)
Angiostrongylus , ADN de Helmintos , ADN Espaciador Ribosómico , Reacción en Cadena en Tiempo Real de la Polimerasa , Sensibilidad y Especificidad , Infecciones por Strongylida , Animales , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Angiostrongylus/genética , Angiostrongylus/aislamiento & purificación , Infecciones por Strongylida/diagnóstico , Infecciones por Strongylida/parasitología , ADN Espaciador Ribosómico/genética , ADN de Helmintos/genética , Humanos , Temperatura de Transición , Técnicas de Diagnóstico Molecular/métodos
3.
Parasitol Res ; 123(8): 295, 2024 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-39112748

RESUMEN

This study represents the first investigation into the occurrence and identification of Metastrongylus spp. in wild boars (Sus scrofa) in Iran, utilizing both molecular and morphological methods. Thirteen wild boars from Kerman Province were examined, with 92.3% found to be infected with at least one species of Metastrongylus. Mixed infections were observed in 38.46% of the animals. Morphological and molecular analyses confirmed the presence of M. pudendotectus and M. salmi, with prevalence rates of 76.9% and 53.9%, respectively. Histopathological examination revealed transverse and longitudinal sections of Metastrongylus parasites within the airways, causing partial to complete obstruction, interstitial pneumonia, and inflammatory responses. The study also highlights the public health significance of these parasites. The higher prevalence observed compared to earlier studies suggests changes in environmental conditions, host dynamics, or agricultural practices as possible factors, warranting further investigation. The findings underscore the need for comprehensive surveillance and control measures to mitigate the risk of zoonotic transmission, particularly in regions with significant wild and domestic swine populations. This study contributes to the understanding of Metastrongylus spp. distribution and their pathological impact, emphasizing the ecological importance of wild boars and the necessity for continued monitoring and research to prevent and control infections in both animal and human populations.


Asunto(s)
Metastrongyloidea , Infecciones por Strongylida , Sus scrofa , Enfermedades de los Porcinos , Animales , Irán/epidemiología , Infecciones por Strongylida/veterinaria , Infecciones por Strongylida/parasitología , Infecciones por Strongylida/epidemiología , Sus scrofa/parasitología , Enfermedades de los Porcinos/parasitología , Enfermedades de los Porcinos/epidemiología , Porcinos , Metastrongyloidea/aislamiento & purificación , Metastrongyloidea/clasificación , Metastrongyloidea/genética , Prevalencia , Pulmón/parasitología , ADN de Helmintos/genética , Masculino , Análisis de Secuencia de ADN , Coinfección/parasitología , Coinfección/veterinaria , Coinfección/epidemiología
4.
Acta Parasitol ; 69(3): 1411-1425, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39127779

RESUMEN

PURPOSE: Molecular phylogenetics has been improving the acanthocephalan systematics, yet numerous taxa remain unexplored. The palaeacanthocephalan Metarhadinorhynchus Yamaguti, 1959 and its type species M. lateolabracis Yamaguti, 1959 are such to-be-explored taxa. We aim to refine (i) the systematic placement, (ii) the morphological circumscription, and (iii) the taxonomic components of the genus. We also aim to examine the taxonomic status of the species that have been assigned to the genus. METHODS: Morphological observations on newly collected specimens as well as the type material of Metarhadinorhynchus lateolabracis were conducted. Also, molecular phylogenetic analyses with maximum-likelihood method and Bayesian inference were performed based on freshly collected specimens. Nominal species that have at least once been assigned in Metarhadinorhynchus, as well as a related form, Gorgorhynchus lateolabri Yin and Wu, 1984, are taxonomically re-evaluated based on literature information. RESULTS: Our re-examination of the type material of M. lateolabracis revealed that the number of cement glands is six, instead of eight as described and illustrated in the original description. In the resulting phylogenetic tree, M. lateolabracis was nested in Isthmosacanthidae. Gorgorhynchoides Cable and Linderoth, 1963 was found to be a junior synonym of Metarhadinorhynchus. Taxonomic re-evaluations of six nominal species that have once belonged in Metarhadinorhynchus led to modifications of generic diagnoses for Indorhynchus Golvan, 1969 and Neotegorhynchus Lisitsyna, Xi, Orosová, Barcák, and Oros, 2022. CONCLUSIONS: Metarhadinorhynchus has been assigned to Leptorhynchoididae (Echinorhynchida), but our study now locates it in Isthmosacanthidae (Polymorphida). We propose 13 new combinations of specific names in Metarhadinorhynchus and three in Indorhynchus. Metarhadinorhynchus lateolabri (Yin and Wu, 1984) comb. nov. may be synonymous with M. orientalis (Wang, 1966) comb. nov.


Asunto(s)
Acantocéfalos , Enfermedades de los Peces , Helmintiasis Animal , Filogenia , Animales , Acantocéfalos/clasificación , Acantocéfalos/genética , Acantocéfalos/anatomía & histología , Enfermedades de los Peces/parasitología , Helmintiasis Animal/parasitología , Teorema de Bayes , ADN de Helmintos/genética , Femenino , Masculino
5.
Acta Parasitol ; 69(3): 1600-1612, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39162922

RESUMEN

OBJECTIVES: An integrative taxonomic description of Aponurus laguncula (Lecithasteridae), a digenean parasitic species of Chaetodipterus faber (Acanthuriformes) from Brazilian Southeast, is provided. Morphological techniques, as whole mounted slides, histology and scanning electron microscopy, and molecular analyses supported that integrative description. METHODS: Fifteen digenean specimens were stained in hydrochloric carmine and mounted on permanent slides. Two specimens were stained in hematoxylin and eosin following histological routine processing. Four parasites were dehydrated through a graded ethanol series, critical point dried with carbon dioxide and coated with gold to scanning electron microscopy analysis. Sequence of the large ribosomal subunit (28S rDNA) gene was generated and used to construct a phylogeny based on maximum likelihood and Bayesian inference analyses. RESULTS: Morphological description and morphometric data obtained in present study were in accordance with previous studies of the species. Use of another morphological techniques, as scanning electron microscopy and histology, corroborated the observed features of whole mounted slides. Also, they provided a better observation of previous reported characteristics and new features reporting, such as an elongated hermaphroditic duct, a smooth tegument and cells that compose the prostatic gland. The molecular sequence obtained in the present study formed a robust clade with available sequences of species of Aponurus. CONCLUSIONS: The integrative taxonomic approach successfully combined morphological observations, including both previously reported features and new descriptions from histological and electron microscopy analyses, with molecular data to identify these specimens as A. laguncula. Moreover, the detailed characterization of structures, such as the gonads in A. laguncula, that would be challenging to analyze using a single technique, was possible. Further molecular studies with less conserved genetic markers should be conducted to understand phylogenetic relationships between Aponurus species.


Asunto(s)
Enfermedades de los Peces , Microscopía Electrónica de Rastreo , Filogenia , Trematodos , Infecciones por Trematodos , Animales , Brasil , Enfermedades de los Peces/parasitología , Trematodos/genética , Trematodos/clasificación , Trematodos/aislamiento & purificación , Trematodos/ultraestructura , Trematodos/anatomía & histología , Microscopía Electrónica de Rastreo/veterinaria , Infecciones por Trematodos/veterinaria , Infecciones por Trematodos/parasitología , ARN Ribosómico 28S/genética , Peces/parasitología , ADN Ribosómico/genética , ADN de Helmintos/genética
6.
Acta Parasitol ; 69(3): 1640-1647, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39164554

RESUMEN

BACKGROUND: Macracanthorhynchus hirudinaceus (Pallas, 1781) is a zoonotic acanthocephalan that parasitizes the small intestine of wild boars. It is a pathogenic that causes economic losses, and poses a public health threat due to increased emergence. PURPOSE: The aims of this study is describes histopathologically the damage caused by M. hirudinaceus in the small intestine of wild boar Sus scrofa Linnaeus, 1758, and molecularly characterize this parasite (sequences, haplotypes, phylogeny) for the first time in Elazig city, Türkiye. RESULTS: A high prevalence of infection was obtained. Upon separating the worms, it was discovered that there were ulcers resembling craters in the center, of the small intestine mucosa, surrounded by edema. The intestine wall where the parasite attached was damaged, with the villi epithelium and lamina propria in the mucosa being destroyed. The genomic DNA was isolated from all M. hirudinaceus samples, and PCR amplified the 489 bp gene fragments were sequenced and confirmed that all 21 sequences were M. hirudinaceus. The haplotype analysis of the sequences revealed the presence of a central star-shaped haplotype, in addition to four other haplotypes. CONCLUSION: After conducting sequence analysis, the genetic differences between the M. hirudinaceus sequences obtained in this study and those reported from Europe and Japan suggest that this parasite is endemic to Türkiye's local wild boar population. Also, four haplotypes were identified, distinguishing it from other haplotypes by 1-5 mutation steps. It is essential to consider the worm's sequences and the formation of haplotypes, since these intrinsic characteristics may impact in the epidemiology and pathology of the worm in the future.


Asunto(s)
Acantocéfalos , Filogenia , Sus scrofa , Enfermedades de los Porcinos , Animales , Acantocéfalos/genética , Acantocéfalos/clasificación , Acantocéfalos/aislamiento & purificación , Enfermedades de los Porcinos/parasitología , Enfermedades de los Porcinos/epidemiología , Sus scrofa/parasitología , Porcinos , Intestino Delgado/parasitología , Intestino Delgado/patología , Helmintiasis Animal/parasitología , Helmintiasis Animal/epidemiología , Haplotipos , ADN de Helmintos/genética , Análisis de Secuencia de ADN
7.
Acta Trop ; 258: 107337, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39098751

RESUMEN

Angiostrongylus vasorum is a metastrongylid parasite infecting wild canids and domestic dogs. Its patchy distribution, high pathogenicity and taxonomical classification makes the evolutionary history of A. vasorum intriguing and important to study. First larval stages of A. vasorum were recovered from feces of two grey foxes, Urocyon cinereoargenteus, from Costa Rica. Sequencing and phylogenetic and haplotypic analyses of the ITS2, 18S and cytochrome oxidase subunit 1 (cox1) fragments were performed. Then p- and Nei´s genetic distance, nucleotide substitution rates and species delimitation analyses were conducted with cox1 data of the specimens collected herein and other Angiostrongylus spp. Cophylogenetic congruence and coevolutionary events of Angiostrongylus spp. and their hosts were evaluated using patristic and phenetic distances and maximum parsimony reconciliations. Specimens from Costa Rica clustered in a separate branch from European and Brazilian A. vasorum sequences in the phylogenetic and haplotype network analyses using the ITS2 and cox1 data. In addition, cox1 p-distance of the sequences derived from Costa Rica were up to 8.6 % different to the ones from Europe and Brazil, a finding mirrored in Nei´s genetic distance PCoA. Species delimitation analysis supported a separate group with the sequences from Costa Rica, suggesting that these worms may represent cryptic variants of A. vasorum, a new undescribed taxon or Angiocaulus raillieti, a synonym species of A. vasorum described in Brazil. Moreover, nucleotide substitution rates in A. vasorum were up to six times higher than in the congener Angiostrongylus cantonensis. This finding and the long time elapsed since the last common ancestor between both species may explain the larger diversity in A. vasorum. Finally, cophylogenetic congruence was observed between Angiostrongylus spp. and their hosts, with cospeciation events occurring at deeper taxonomic branching of host order. Altogether, our data suggest that the diversity of the genus Angiostrongylus is larger than expected, since additional species may be circulating in wild canids from the Americas.


Asunto(s)
Angiostrongylus , Filogenia , Animales , Angiostrongylus/genética , Angiostrongylus/clasificación , Angiostrongylus/aislamiento & purificación , Costa Rica , Variación Genética , Infecciones por Strongylida/parasitología , Infecciones por Strongylida/veterinaria , Infecciones por Strongylida/epidemiología , Análisis de Secuencia de ADN , Heces/parasitología , Zorros/parasitología , Complejo IV de Transporte de Electrones/genética , ADN de Helmintos/genética , Haplotipos , ADN Espaciador Ribosómico/genética , Américas , Perros
8.
Mol Biol Rep ; 51(1): 918, 2024 Aug 19.
Artículo en Inglés | MEDLINE | ID: mdl-39158609

RESUMEN

BACKGROUND: Root-lesion nematodes (RLN) are the most economically important pathogenic nematodes attacking maize. Significant economic losses due to lesion nematodes have been reported in maize producing countries in the world. METHODS AND RESULTS: This study was conducted to determine the distribution and identity of root-lesion nematodes (Pratylenchus spp.) (Tylenchida: Hoplolaimidae) in maize (Zea mays L.) (Poales: Poaceae) fields of the Black Sea region of Türkiye. For this purpose, 39 locations were surveyed and soil samples were taken from 17 regional provinces. Nematodes were extracted using the modified Baerman funnel technique. The species were identified based on sequences of the Internal Transcribed Spacer (ITS) region of ribosomal DNA, as well as morphological characters and morphometrics. In addition, species identifications were confirmed using species-specific primers in the D3 expansion region of 26 S rDNA. At the end of the study, 51.3% of the maize production areas sampled in the region were infected with root-lesion nematode species. Pratylenchus agilis, P. mediterraneus, P. neglectus, P. penetrans, P. thornei, and P. vulnus were identified, and were present in 25%, 5%, 25%, 10%, 15%, and 20% of samples, respectively. To our knowledge, this is the first report of P. agilis in Türkiye. CONCLUSION: The present study concluded that the molecular analysis of Pratylenchus sequences based on the ITS and D3 region of ribosomal RNA genes allowed the identification of six root lesion nematode species. This study is of great importance in terms of adding additional species to the root-lesion nematode fauna in Turkey and will provide data for future research on the management of these nematodes.


Asunto(s)
Filogenia , Enfermedades de las Plantas , Raíces de Plantas , Tylenchida , Zea mays , Animales , Zea mays/parasitología , Zea mays/genética , Raíces de Plantas/parasitología , Raíces de Plantas/genética , Tylenchida/genética , Tylenchida/patogenicidad , Enfermedades de las Plantas/parasitología , Enfermedades de las Plantas/genética , ADN Espaciador Ribosómico/genética , Turquía , ADN Ribosómico/genética , ADN de Helmintos/genética
9.
Acta Parasitol ; 69(3): 1372-1381, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38951380

RESUMEN

PURPOSE: Crenosoma vulpis (Dujardin,1845) is a lungworm which has spread worldwide in canines and is associated with upper respiratory infections. In a majority of cases, the infections are accompanied with chronic cough. Diagnosis of lungworms is often underdiagnosed and can be misinterpreted as other respiratory diseases. METHODS: The Small Animal Clinic of the University Veterinary Hospital admitted an 11-month-old dog presented with persistent cough associated with difficulty in breathing and even asphyxia. Based on clinical symptoms, the patient underwent radiological and bronchoscopic examination. Bronchoscopy revealed the presence of lungworms obturating the branches of the tracheobronchial tree. Larvae were collected by bronchoscopic lavage and subjected to parasitological and molecular examination. RESULTS: Microscopic detection and morphological identification of the worms removed during the bronchoscopy confirmed the presence of female adult worms. The subsequent molecular characterisation of the mitochondrial (cytochrome c oxidase subunit I gene (cox1) and 12S ribosomal DNA (rDNA)), nuclear (18S rDNA) genes, as well as the analysis of the second internal transcribed spacer (ITS-2) region of the ribosomal DNA, confirmed the Crenosoma vulpis species. Faecal samples were processed using the Baermann method, which confirmed the presence of the larval stage 1 of C. vulpis. The therapy with fenbendazole at a dose of 50 mg/kg of live weight once daily for the period of 7 days was initiated for the patient. CONCLUSION: This paper presents the first molecularly confirmed clinical case of a Crenosoma vulpis infection in an 11-month-old female dog of the Miniature Schnauzer breed in Slovakia.


Asunto(s)
Enfermedades de los Perros , Animales , Perros , Enfermedades de los Perros/parasitología , Enfermedades de los Perros/diagnóstico , Eslovaquia , Femenino , Infecciones por Strongylida/veterinaria , Infecciones por Strongylida/parasitología , Infecciones por Strongylida/diagnóstico , Infecciones por Strongylida/tratamiento farmacológico , Metastrongyloidea/genética , Metastrongyloidea/aislamiento & purificación , Metastrongyloidea/clasificación , ADN de Helmintos/genética , Complejo IV de Transporte de Electrones/genética , Fenbendazol/uso terapéutico , ADN Ribosómico/genética , ADN Espaciador Ribosómico/genética , Antihelmínticos/uso terapéutico
10.
Nucleic Acids Res ; 52(15): 8913-8929, 2024 Aug 27.
Artículo en Inglés | MEDLINE | ID: mdl-38953168

RESUMEN

Most DNA double-strand breaks (DSBs) are harmful to genome integrity. However, some forms of DSBs are essential to biological processes, such as meiotic recombination and V(D)J recombination. DSBs are also required for programmed DNA elimination (PDE) in ciliates and nematodes. In nematodes, the DSBs are healed with telomere addition. While telomere addition sites have been well characterized, little is known regarding the DSBs that fragment nematode chromosomes. Here, we used embryos from the human and pig parasitic nematode Ascaris to characterize the DSBs. Using END-seq, we demonstrate that DSBs are introduced before mitosis, followed by extensive end resection. The resection profile is unique for each break site, and the resection generates 3'-overhangs before the addition of neotelomeres. Interestingly, telomere healing occurs much more frequently on retained DSB ends than on eliminated ends. This biased repair of the DSB ends may be due to the sequestration of the eliminated DNA into micronuclei, preventing neotelomere formation at their ends. Additional DNA breaks occur within the eliminated DNA in both Ascaris and Parascaris, ensuring chromosomal breakage and providing a fail-safe mechanism for PDE. Overall, our data indicate that telomere healing of DSBs is specific to the break sites responsible for nematode PDE.


Asunto(s)
Roturas del ADN de Doble Cadena , Telómero , Animales , Telómero/metabolismo , Telómero/genética , Reparación del ADN , Ascaris/genética , Humanos , ADN de Helmintos/genética , Porcinos , Mitosis/genética
11.
Parasite ; 31: 36, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38953782

RESUMEN

Schistosomiasis is of medical and veterinary importance. Despite the critical situation of schistosomiasis in sub-Saharan Africa, few molecular epidemiological studies have been carried out to determine the role of animals in its transmission. In Mali, it has been over three decades since the last molecular study of animal schistosomes was carried out. It is now urgent to identify circulating strains of the parasite because of potential interactions with other schistosome species, which could complicate disease control. The aim of our work was to study the composition and genetic structure of schistosome populations collected from cattle. The prevalence of schistosome was 23.9%, with the prevalences of Schistosoma bovis (Sb) and S. curassoni (Sc) estimated at 12.6% and 9.8%, respectively. No hybrid strains or S. haematobium were found. The parasites displayed distinct geographical distribution with Sb dominant in Bamako (78.8% and 98% in Central Bamako Slaughterhouse and Sabalibougou Slaughterhouses, respectively) and Sc dominant in Kayes (95.3%). Of the 476 parasites with a complete genetic profile, 60.4% were pure Sc, and were mainly from Kayes. We identified two clusters at the site level (Fst of 0.057 and 0.042 for Sb and Sc, respectively). Cluster 1 was predominantly composed of pure Sb parasites and cluster 2 was mainly composed of pure Sc parasites, from Bamako and Kayes, respectively. Our study shows that cattle schistosomiasis remains endemic in Mali with S. bovis and S. curassoni. A robust genetic structure between the different schistosome populations was identified, which included two clusters based on the geographical distribution of the parasites.


Title: Structure génétique des populations de Schistosoma bovis et S. curassoni collectées chez des bovins au Mali. Abstract: La schistosomiase revêt une grande importance médicale et vétérinaire. Malgré la situation critique de la schistosomiase en Afrique subsaharienne, peu d'études épidémiologiques moléculaires ont été réalisées pour déterminer le rôle des animaux dans sa transmission. Au Mali, cela fait plus de trois décennies que la dernière étude moléculaire des schistosomes animaux a été réalisée. Il est désormais urgent d'identifier les souches circulantes du parasite en raison des interactions potentielles avec d'autres espèces de schistosomes, ce qui pourrait compliquer la lutte contre la maladie. Le but de notre travail était d'étudier la composition et la structure génétique des populations de schistosomes collectées chez des bovins. La prévalence des schistosomes était de 23,9 %, celles de Schistosoma bovis (Sb) et de S. curassoni (Sc) étant respectivement estimées à 12,6 % et 9,8 %. Aucune souche hybride ni S. haematobium n'ont été trouvés. Les parasites présentaient une répartition géographique distincte avec Sb dominant à Bamako (respectivement 78,8 % et 98 % aux Abattoirs Centraux de Bamako et aux Abattoirs de Sabalibougou) et Sc dominant à Kayes (95,3 %). Sur les 476 parasites ayant un profil génétique complet, 60,4 % étaient des Sc purs, et provenaient principalement de Kayes. Nous avons identifié deux clusters au niveau du site (Fst de 0,057 et 0,042 pour Sb et Sc, respectivement). Le groupe 1 était principalement composé de parasites Sb purs et le groupe 2 était principalement composé de parasites Sc purs, provenant respectivement de Bamako et de Kayes. Notre étude montre que la schistosomiase bovine reste endémique au Mali, avec S. bovis and S. curassoni. Une structure génétique robuste entre les différentes populations de schistosomes a été identifiée, comprenant deux groupes basés sur la répartition géographique des parasites.


Asunto(s)
Enfermedades de los Bovinos , Schistosoma , Esquistosomiasis , Animales , Bovinos , Malí/epidemiología , Schistosoma/genética , Schistosoma/clasificación , Schistosoma/aislamiento & purificación , Enfermedades de los Bovinos/parasitología , Enfermedades de los Bovinos/epidemiología , Esquistosomiasis/veterinaria , Esquistosomiasis/epidemiología , Esquistosomiasis/parasitología , Esquistosomiasis/transmisión , Prevalencia , Variación Genética , Genética de Población , ADN de Helmintos/genética
12.
Parasit Vectors ; 17(1): 321, 2024 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-39068490

RESUMEN

BACKGROUND: Urogenital schistosomiasis is caused by the parasitic trematode Schistosoma haematobium. Sensitive and specific point-of-care diagnostics are needed for elimination of this disease. Recombinase polymerase amplification (RPA) assays meet these criteria, and an assay to diagnose S. haematobium has been developed (Sh-RPA). However, false-positive results can occur, and optimisation of reaction conditions to mitigate these is needed. Ease of use and compatibility of DNA extraction methods must also be considered. METHODS: Using synthetic DNA, S. haematobium genomic DNA (gDNA), and urine samples from clinical cases, Sh-RPA reactions incorporating different betaine concentrations (0 M, 1 M, 2.5 M, 12.5 M) and the sample-to-water ratios were tested to determine effects on assay specificity and sensitivity. In addition, five commercial DNA extraction kits suitable for use in resource-limited settings were used to obtain gDNA from single S. haematobium eggs and evaluated in terms of DNA quality, quantity, and compatibility with the Sh-RPA assay. All samples were also evaluated by quantitative polymerase chain reaction (qPCR) to confirm DNA acquisition. RESULTS: The analytical sensitivity of the Sh-RPA with all betaine concentrations was ≥ 10 copies of the synthetic Dra1 standard and 0.1 pg of S. haematobium gDNA. The addition of betaine improved Sh-RPA assay specificity in all reaction conditions, and the addition of 2.5 M of betaine together with the maximal possible sample volume of 12.7 µl proved to be the optimum reaction conditions. DNA was successfully isolated from a single S. haematobium egg using all five commercial DNA extraction kits, but the Sh-RPA performance of these kits varied, with one proving to be incompatible with RPA reactions. CONCLUSIONS: The addition of 2.5 M of betaine to Sh-RPA reactions improved reaction specificity whilst having no detrimental effect on sensitivity. This increases the robustness of the assay, advancing the feasibility of using the Sh-RPA assay in resource-limited settings. The testing of commercial extraction kits proved that crude, rapid, and simple methods are sufficient for obtaining DNA from single S. haematobium eggs, and that these extracts can be used with Sh-RPA in most cases. However, the observed incompatibility of specific kits with Sh-RPA highlights the need for each stage of a molecular diagnostic platform to be robustly tested prior to implementation.


Asunto(s)
Técnicas de Amplificación de Ácido Nucleico , Sistemas de Atención de Punto , Schistosoma haematobium , Esquistosomiasis Urinaria , Sensibilidad y Especificidad , Animales , Schistosoma haematobium/genética , Schistosoma haematobium/aislamiento & purificación , Esquistosomiasis Urinaria/diagnóstico , Esquistosomiasis Urinaria/orina , Esquistosomiasis Urinaria/parasitología , Técnicas de Amplificación de Ácido Nucleico/métodos , Humanos , ADN de Helmintos/genética , ADN de Helmintos/aislamiento & purificación , Recombinasas/metabolismo , Recombinasas/genética , Técnicas de Diagnóstico Molecular/métodos
13.
PeerJ ; 12: e17598, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-39011383

RESUMEN

Background: In Europe, avian schistosomes of the genus Trichobilharzia are the most common etiological agents involved in human cercarial dermatitis (swimmer's itch). Manifested by a skin rash, the condition is caused by an allergic reaction to cercariae of nonhuman schistosomes. Humans are an accidental host in this parasite's life cycle, while water snails are the intermediate, and waterfowl are the final hosts. The study aimed to conduct a molecular and phylogenetic analysis of Trichobilharzia species occurring in recreational waters in North-Eastern Poland. Methodology: The study area covered three water bodies (Lake Skanda, Lake Ukiel, and Lake Tyrsko) over the summer of 2021. In total, 747 pulmonate freshwater snails (Radix spp., Lymnaea stagnalis) were collected. Each snail was subjected to 1-2 h of light stimulation to induce cercarial expulsion. The phylogenetic analyses of furcocercariae were based on the partial sequence of the ITS region (ITS1, 5.8S rDNA, ITS2 and 28SrDNA). For Radix spp. phylogenetic analyses were based on the ITS-2 region. Results: The prevalence of the Trichobilharzia species infection in snails was 0.5%. Two out of 478 (0.4%) L. stagnaliswere found to be infected with Trichobilharzia szidati. Moreover, two out of 269 (0.7%) snails of the genus Radix were positive for schistosome cercariae. Both snails were identified as Radix auricularia. One of them was infected with Trichobilharzia franki and the other with Trichobilharzia sp. Conclusions: Molecular identification of avian schistosome species, both at the intermediate and definitive hosts level, constitutes an important source of information on a potential threat and prognosis of local swimmer's itch occurrence, and helps to determine species diversity in a particular area.


Asunto(s)
Filogenia , Schistosomatidae , Animales , Schistosomatidae/genética , Polonia/epidemiología , Caracoles/parasitología , Lagos/parasitología , Humanos , Infecciones por Trematodos/parasitología , Infecciones por Trematodos/veterinaria , Infecciones por Trematodos/epidemiología , ADN de Helmintos/genética
14.
Parasit Vectors ; 17(1): 311, 2024 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-39030625

RESUMEN

BACKGROUND: Gastrointestinal helminths are a very widespread group of intestinal parasites that can cause major health issues in their hosts, including severe illness or death. Traditional methods of helminth parasite identification using microscopy are time-consuming and poor in terms of taxonomic resolution, and require skilled observers. DNA metabarcoding has emerged as a powerful alternative for assessing community composition in a variety of sample types over the last few decades. While metabarcoding approaches have been reviewed for use in other research areas, the use of metabarcoding for parasites has only recently become widespread. As such, there is a need to synthesize parasite metabarcoding methodology and highlight the considerations to be taken into account when developing a protocol. METHODS: We reviewed published literature that utilized DNA metabarcoding to identify gastrointestinal helminth parasites in vertebrate hosts. We extracted information from 62 peer-reviewed papers published between 2014 and 2023 and created a stepwise guide to the metabarcoding process. RESULTS: We found that studies in our review varied in technique and methodology, such as the sample type utilized, genetic marker regions targeted and bioinformatic databases used. The main limitations of metabarcoding are that parasite abundance data may not be reliably attained from sequence read numbers, metabarcoding data may not be representative of the species present in the host and the cost and bioinformatic expertise required to utilize this method may be prohibitive to some groups. CONCLUSIONS: Overall, using metabarcoding to assess gastrointestinal parasite communities is preferable to traditional methods, yielding higher taxonomic resolution, higher throughput and increased versatility due to its utility in any geographical location, with a variety of sample types, and with virtually any vertebrate host species. Additionally, metabarcoding has the potential for exciting new discoveries regarding host and parasite evolution.


Asunto(s)
Código de Barras del ADN Taxonómico , Helmintos , Parasitosis Intestinales , Vertebrados , Código de Barras del ADN Taxonómico/métodos , Animales , Helmintos/genética , Helmintos/clasificación , Helmintos/aislamiento & purificación , Vertebrados/parasitología , Parasitosis Intestinales/parasitología , Humanos , Helmintiasis/parasitología , Tracto Gastrointestinal/parasitología , Biología Computacional/métodos , ADN de Helmintos/genética
15.
Diagn Microbiol Infect Dis ; 110(1): 116444, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39024933

RESUMEN

Human ascariasis is a soil-transmitted helminthiasis and remains a neglected tropical disease. Ascaris suum has the potential to cause cross-infections between humans and pigs. In this study, we present a rare case of a patient with asymptomatic infection by Ascaris suum. A 66-year-old male underwent colonoscopy, and a white linear worm body was found in the hepatic curvature. The worm was collected by aspiration and submitted to the laboratory for parasite identification. The patient had no symptoms related to parasitic infection. The worm was highly suspected to be of the genus Ascaris. Because of the difficulty of morphological classification, genetic analysis was performed. From PCR-restriction fragment length polymorphism results and sequence analysis of the internal transcribed spacer-1 region, it was determined to be A. suum. The experience with rapid differentiation of A. suum by performing genetic analysis will be useful for future examinations of parasitic infections.


Asunto(s)
Ascariasis , Ascaris suum , ADN de Helmintos , Reacción en Cadena de la Polimerasa , Polimorfismo de Longitud del Fragmento de Restricción , Análisis de Secuencia de ADN , Humanos , Ascariasis/parasitología , Ascariasis/diagnóstico , Masculino , Animales , Anciano , Ascaris suum/genética , Ascaris suum/aislamiento & purificación , Reacción en Cadena de la Polimerasa/métodos , ADN de Helmintos/genética , Infecciones Asintomáticas , ADN Espaciador Ribosómico/genética
16.
Sci Rep ; 14(1): 16780, 2024 07 22.
Artículo en Inglés | MEDLINE | ID: mdl-39039168

RESUMEN

Lymphatic filariasis (LF) is a crippling and disfiguring parasitic condition. India accounts for 55% of the world's LF burden. The filarial parasite Wuchereria bancrofti is known to cause 99.4% of the cases while, Brugia malayi accounts for 0.6% of the issue occurring mainly in some pockets of Odisha and Kerala states. The Balasore (Baleswar) district of Odisha has been a known focus of B. malayi transmission. We employed molecular xenomonitoring to detect filarial parasite DNA in vectors. In six selected villages, Gravid traps were used to collect Culex mosquitoes and hand catch method using aspirators was followed for collection of mansonioides. A total of 2903 mosquitoes comprising of Cx. quinquefasciatus (n = 2611; 89.94%), Cx. tritaeniorhynchus (n = 100; 3.44%), Mansonia annuliferea (n = 139; 4.78%) and Mansonia uniformis (n = 53; 1.82%) were collected from six endemic villages. The species wise mosquitoes were made into 118 pools, each with a maximum of 25 mosquitoes, dried and transported to the laboratory at VCRC, Puducherry. The mosquito pools were subjected to parasite DNA extraction, followed by Real-time PCR using LDR and HhaI probes to detect W. bancrofti and B. malayi infections, respectively. Seven pools (6.66%) of Cx. quinquefasciatus, showed infection with only W. bancrofti while none of the pools of other mosquito species showed infection with either W. bancrofti or B. malayi. Although the study area is endemic to B. malayi, none of the vectors of B. malayi was found with parasite infection. This study highlights the ongoing transmission of bancroftian filariasis in the study villages of Balasore district of Odisha and its implications for evaluating LF elimination programme.


Asunto(s)
Brugia Malayi , Filariasis Linfática , Wuchereria bancrofti , Animales , Wuchereria bancrofti/aislamiento & purificación , Wuchereria bancrofti/genética , India/epidemiología , Brugia Malayi/genética , Brugia Malayi/aislamiento & purificación , Filariasis Linfática/epidemiología , Filariasis Linfática/parasitología , Filariasis Linfática/transmisión , Humanos , Mosquitos Vectores/parasitología , Culex/parasitología , Enfermedades Endémicas , Femenino , ADN de Helmintos/genética , ADN de Helmintos/análisis , Filariasis/epidemiología , Filariasis/parasitología , Filariasis/transmisión
17.
Parasitol Res ; 123(6): 239, 2024 Jun 11.
Artículo en Inglés | MEDLINE | ID: mdl-38860991

RESUMEN

Echinococcus granulosus sensu lato (s.l.) is a species complex with the potential to cause cystic echinococcosis (CE). Contact with the feces of domestic dogs (Canis familiaris) fed with raw viscera of intermediate livestock hosts is a risk factor for this infection in the southern region of Brazil. Although the region has been considered endemic to CE for many years, molecular data regarding the species of the complex causing CE in humans are scarce. This study aimed to perform a molecular analysis of the biological fluid from a human liver cyst to investigate the species responsible for CE. Genetic material obtained from the hydatid fluid of a hepatic cyst from a human with CE was subjected to PCR to amplify mitochondrial and nuclear DNA sequences. The phylogenetic analysis confirmed the human infection by Echinococcus canadensis G7 in the state of Paraná, Brazil. This is the first molecular record of E. canadensis G7 infecting a human in Brazil, and it is important to reiterate the risk of human CE caused by this species in South America, as reported by a previous study in Patagonia, Argentina. From the epidemiological point of view, this finding is of great relevance for the southern region of Brazil, since this parasite has previously only been detected in pigs in the state of Rio Grande do Sul, neighboring Paraná. The finding points to the importance of this identification in the molecular epidemiology of E. granulosus s.l., especially in South America.


Asunto(s)
ADN de Helmintos , Echinococcus , Filogenia , Animales , Humanos , Masculino , Brasil/epidemiología , ADN de Helmintos/genética , ADN Mitocondrial/genética , Equinococosis/veterinaria , Equinococosis/parasitología , Equinococosis/epidemiología , Echinococcus/genética , Echinococcus/clasificación , Echinococcus/aislamiento & purificación , Reacción en Cadena de la Polimerasa , Análisis de Secuencia de ADN
18.
Parasitol Res ; 123(6): 243, 2024 Jun 14.
Artículo en Inglés | MEDLINE | ID: mdl-38874599

RESUMEN

Diphyllobothriosis, a fish-borne zoonosis in South America, is mainly caused by the Pacific broad tapeworm Adenocephalus pacificus Nybelin, 1931, a parasite of considerable concern in fishery resources due to its impact on public health. A new diphyllobothrid, Diphyllobothrium sprakeri Hernández-Orts et al. Parasites Vectors 14:219, 2021, was recently described from sea lions from the Pacific Coast, but marine fish acting as intermediate hosts are unknown. The objective of this study was to confirm the presence of plerocercoid larvae of Diphyllobothriidae Lühe, 1910 (Cestoda: Diphyllobothriidea) in nine fish species of commercial importance in Peru. Of a total of 6999 fish (5861 Engraulis ringens, 853 Sciaena deliciosa, 6 Sciaena callaensis, 171 Scomber japonicus, 40 Trachurus murphyi, 40 Ariopsis seemanni, 18 Merluccius peruanus, 5 Sarda chiliensis, and 5 Coryphaena hippurus), 183 were infected with plerocercoid larvae, representing a total prevalence of 2.61% and a mean intensity of 3.2. Based on mtDNA cox1 sequences of 43 plerocercoids, a phylogenetic analysis revealed that 41 belong to A. pacificus and two to D. sprakeri. These findings are first molecular data for D. sprakeri larvae, and the infections of E. ringens and T. murphyi by plerocercoid larvae represent the first records of intermediate/paratenic hosts for this species. Hence, the findings of the current study enhance our understanding of the presence of diphyllobothriid species in commercial fish from the Southeastern Pacific Ocean and their potential impact on seafood safety for local human populations.


Asunto(s)
Enfermedades de los Peces , Peces , Larva , Animales , Perú/epidemiología , Enfermedades de los Peces/parasitología , Enfermedades de los Peces/epidemiología , Peces/parasitología , Prevalencia , Larva/clasificación , Larva/crecimiento & desarrollo , Larva/genética , Filogenia , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/parasitología , Infecciones por Cestodos/epidemiología , Cestodos/genética , Cestodos/clasificación , Cestodos/aislamiento & purificación , Diphyllobothrium/genética , Diphyllobothrium/clasificación , Diphyllobothrium/aislamiento & purificación , Difilobotriosis/epidemiología , Difilobotriosis/parasitología , Difilobotriosis/veterinaria , ADN de Helmintos/genética
19.
Parasitol Res ; 123(6): 237, 2024 Jun 10.
Artículo en Inglés | MEDLINE | ID: mdl-38856825

RESUMEN

Mastophorus muris (Gmelin, 1790) is a globally distributed parasitic nematode of broad range mammals. The taxonomy within the genus Mastophorus and the cryptic diversity among the genus are controversial among taxonomists. This study provides a detailed morphological description of M. muris from Mus musculus combined with a molecular phylogenetic approach. Moreover, descriptions and molecular data of M. muris from non-Mus rodents and wildcats complement our findings and together provide new insights into their taxonomy. The analysis of M. muris was based on light microscopy and scanning electron microscopy. The morphological description focused on the dentition pattern of the two trilobed pseudolabia. Additionally, we described the position of the vulva, arrangement of caudal pairs of papillae, spicules and measured specimens from both sexes and the eggs. For the molecular phylogenetic approach, we amplified the small subunit ribosomal RNA gene and the internal transcribed spacer, and the cytochrome c oxidase subunit 1. Mastophorus morphotypes based on dentition patterns and phylogenetic clustering indicate a subdivision of the genus in agreement with their host. We recognize two groups without a change to formal taxonomy: One group including those specimens infecting Mus musculus, and the second group including organisms infecting non-Mus rodents. Our genetic and morphological data shed light into the cryptic diversity within the genus Mastopohorus. We identified two host-associated groups of M. muris. The described morphotypes and genotypes of M. muris allow a consistent distinction between host-associated parasites.


Asunto(s)
Microscopía Electrónica de Rastreo , Filogenia , Animales , Femenino , Masculino , Ratones , Spiruroidea/clasificación , Spiruroidea/genética , Spiruroidea/anatomía & histología , Spiruroidea/aislamiento & purificación , Spiruroidea/ultraestructura , Complejo IV de Transporte de Electrones/genética , Variación Genética , Análisis de Secuencia de ADN , Microscopía , ADN de Helmintos/genética , ADN Ribosómico/genética , ADN Espaciador Ribosómico/genética , Análisis por Conglomerados , Datos de Secuencia Molecular
20.
Parasitol Res ; 123(6): 240, 2024 Jun 12.
Artículo en Inglés | MEDLINE | ID: mdl-38862687

RESUMEN

Rat lungworm disease or neuroangiostrongyliasis is a cerebral parasitic infection that affects humans and animals alike. Its clinical signs and symptoms can range from mild self-resolving to serious life-threatening conditions. Studies suggest therapeutic interventions during the early stages of infection to be more effective than in later stages. However, early diagnosis of infection is usually problematic without the knowledge of exposure and/or detection of the parasite's DNA or antibody against the parasite in the cerebrospinal fluid. This requires a lumbar puncture, which is an invasive procedure that generally requires hospitalization. This study evaluates an affordable and less invasive alternative to detect parasitic DNA by PCR from the peripheral blood of potentially infected animals. Blood samples from 58 animals (55 dogs and 3 cats) with clinical suspicion of infection were submitted to our lab between February 2019 and August 2022 by local, licensed veterinarians. DNA was extracted from whole blood, plasma, serum, and/or packed cells using the Qiagen DNeasy Blood & Tissue Kit as per the manufacturer's protocol. All 58 animals were tested by real-time PCR using the AcanITS1 assay and 32 of these animals (31dogs; 1 cat) were also tested using the AcanR3990 assay. The PCR results for both assays were classified into strongly positive > positive > weakly positive > negative, and equivocal for ambiguous results, based on the strength of the signal. The percent infection detected using the AcanITS1 and AcanR3990 assays was 12.72% (7/55) and 20.68% (6/29), respectively. The overall percent infection detected was 34.37% (11/32), with only two animals testing positive by both assays. The three cats involved in this study tested negative by both assays. These results are promising and warrant further investigations to increase sensitivity including variables that might affect detection in the blood, such as parasite load, and laboratory methodologies.


Asunto(s)
Angiostrongylus cantonensis , Enfermedades de los Gatos , Reacción en Cadena en Tiempo Real de la Polimerasa , Infecciones por Strongylida , Animales , Angiostrongylus cantonensis/aislamiento & purificación , Angiostrongylus cantonensis/genética , Infecciones por Strongylida/veterinaria , Infecciones por Strongylida/parasitología , Infecciones por Strongylida/diagnóstico , Infecciones por Strongylida/sangre , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Reacción en Cadena en Tiempo Real de la Polimerasa/veterinaria , Gatos , Enfermedades de los Gatos/parasitología , Enfermedades de los Gatos/diagnóstico , Enfermedades de los Gatos/sangre , Perros , Enfermedades de los Perros/parasitología , Enfermedades de los Perros/diagnóstico , Enfermedades de los Perros/sangre , Sensibilidad y Especificidad , ADN de Helmintos/genética , ADN de Helmintos/sangre
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