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1.
Spectrochim Acta A Mol Biomol Spectrosc ; 321: 124764, 2024 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-38959693

RESUMEN

The vibrational and thermodynamic properties of energetic materials (EMs) are critical to understand their structure responses at finite temperature. In this work, the zero-point energy and temperature effects are incorporated into dispersion-corrected density functional theory to improve the calculated accuracy for vibrational responses and thermodynamic behaviors of 3-nitro-1,2,4-triazole-5-one (NTO). Based on temperature-dependent Raman spectroscopy, the emergence and disappearance of new peaks as well as discontinuous Raman shifts indicate the distinct changes of molecular configuration and intermolecular interactions within the temperature of 250-350 K. From Hirshfeld surface and structure analysis, the subtle changes of intermolecular hydrogen bonds (HBs) related with the shrinkage of thermal expansion coefficient, are treated as an essential step of a potential structural transformation of NTO. Moreover, the calculated heat capacity, entropy and bulk moduli could reflect the softening behavior of NTO and further enrich the thermodynamic data set of EMs. These results demonstrate the evolution of NTO molecules controlled by non-covalent interactions and provide vital insights into the thermodynamic behaviors at finite temperature.

2.
J Phys Condens Matter ; 36(20)2024 Feb 16.
Artículo en Inglés | MEDLINE | ID: mdl-38157557

RESUMEN

Lattice dynamics calculations within the quasi-harmonic approximation (QHA) provide an infrastructure for modelling the finite-temperature properties of periodic solids at a modest computational cost. With the recent widespread interest in materials discovery by data mining, a database of computed finite-temperature properties would be highly desirable. In this work we provide a first step toward this goal with a comparative study of the accuracy of five exchange-correlation functionals, spanning the local density approximation (LDA), generalised-gradient approximation (GGA) and meta-GGA levels of theory, for predicting the properties of ten Group 1, 2 and 12 binary metal oxides. We find that the predictions are bounded by the LDA, which tends to underestimate lattice parameters and cell volumes relative to experiments, but yields the most accurate results for bulk moduli, expansion coefficients and Grüneisen parameters, and the PBE GGA, which shows the opposite behaviour. The PBEsol GGA gives the best overall predictions of the lattice parameters and volumes whilst also giving relatively reliable results for other properties. Our results demonstrate that, given a suitable choice of functional, a variety of finite-temperature properties can be predicted with useful accuracy, and hence that high-throughout QHA calculations are technically feasible.

3.
Spectrochim Acta A Mol Biomol Spectrosc ; 303: 123170, 2023 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-37517265

RESUMEN

Currently, only one crystal structure of LLM-105 (2,6-diamino-3,5-dinitropyrazine-1-oxide) (P21/n) has been discovered, and there are still debates on its phase transition point and phase diagram. Based on previous work, we performed crystal structure, Raman spectra, and vibrational properties calculations on LLM-105 crystal. Our results indicate that the crystal structure of LLM-105 remains stable until compressed to 49 GPa, beyond which it may undergo two phase transitions at pressure intervals of 49.0-49.1 GPa and 51.4-51.5 GPa, respectively. Analysis of Raman shift results suggests that these two phase transitions may be reversible, with an intermediate phase possibly acting as a transition phase. Additionally, based on the quasi-harmonic approximation, we fitted the experimental data of LLM-105 lattice expansion state, obtaining the volume at zero pressure and using it for Raman spectra calculations. The results demonstrated the accuracy of this quasi-harmonic approximation method in describing the redshift of Raman peaks during the heating process and the excitation ratio of Raman peaks in different wavenumber ranges.

4.
Spectrochim Acta A Mol Biomol Spectrosc ; 287(Pt 1): 122046, 2023 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-36334415

RESUMEN

3-Hydroxybenzaldehyde (3-HBA) was investigated in the range of 0.6-2.8 THz by terahertz time-domain spectroscopy (THz-TDS) and solid-state density functional theory (ss-DFT) with first-principles calculation. Four distinct peaks were found respectively, and among them, the intensity disparity between experiment and simulation spectra at 2.04 THz was recognized as the biggest inconsistency. Considering thermal behavior can be responsible for this, quasi-harmonic approximation (QHA) method was introduced to mimic the unit cell volume expansion. According to vibrational modes analysis, it was ascertained that the biggest vibrational modes discrepancy was also located at 2.04 THz. Molecules in 0% and 4% unit cell expansion exhibit an opposite rotational direction in a-b plane compared with 2% unit cell expansion. Noncovalent intermolecular interactions were investigated with independent gradient model (IGM), and the result indicates that hydrogen bonding is the dominating noncovalent interaction of 3-HBA. While calculating systematic potential energy to the displaced bonds stretching involving hydrogen atoms, it was found the anomalous potential energy variation to the bond stretching provides a possible explanation for the rotation direction divergence, that is, the rotation direction divergence can be related to some hydrogen atoms seeking lower overall potential energy around their equilibrium positions during bond stretching in response to the variational intermolecular van der Waals force. This research combined THz-TDS with the quasi-harmonic approximation method, elucidating the principle of vibrational characteristics in different volumes, which is beneficial to the investigation of the terahertz low-frequency vibration to thermal behavior as a reference in biochemistry and other fields.

5.
Chemphyschem ; 23(6): e202100849, 2022 03 18.
Artículo en Inglés | MEDLINE | ID: mdl-35098625

RESUMEN

Anharmonicity of molecular vibrational motions is closely associated with the thermal property of crystals. However, the origin of anharmonicity is still not fully understood. Low-frequency vibrations, which are usually defined in the terahertz (THz) range, show excellent sensitivity to anharmonicity. In this work, anharmonicity of isonicotinamide in the form I was investigated by using temperature-dependent terahertz time-domain spectroscopy and the quasi-harmonic approximation (QHA) approach at PBE-D3 and PBE-MBD levels. Both DFT calculations suggest the variation of π-π stacking conformation dominates in the thermal expansion of the unit cell. Frequency shifts of the modes in THz range obtained by QHA approach are found to be qualitatively consistent with experimental observations, demonstrating QHA approach is a useful tool for the interpretation of frequency shifts of modes induced by temperature.


Asunto(s)
Espectroscopía de Terahertz , Conformación Molecular , Niacinamida , Temperatura , Espectroscopía de Terahertz/métodos , Vibración
6.
J Comput Chem ; 43(7): 448-456, 2022 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-34958138

RESUMEN

Five ionic liquids are selected for benchmarking the performance of quasi-harmonic density functional theory (DFT) calculations of structural, phonon, and thermodynamic properties of their crystals. Data predicted by individual computational setups are sorted, establishing a distinct hierarchy among the first-principles approaches. PBE-D3 and B3LYP-D3 functionals are coupled with various plane wave and Gaussian-type orbital (GTO) basis sets. Propagation of the basis set superposition error and of the imperfections of both functionals into finite-temperature properties is discussed in detail. PBE-D3 together with a triple-zeta GTO basis set often yields the most accurate predictions of predicted molar volume and heat capacity with errors at 1% and 8%, respectively, representing the state-of-the-art for quasi-harmonic DFT calculations for crystalline ionic liquids. Fortuitous error cancellation between the basis-set superposition (overbinding) and PBE imperfection (overexpanding) strongly affects the overall accuracy, unlike the case of B3LYP/GTO calculations, impeding systematic convergence of the methodology towards higher accuracy.

7.
J Phys Condens Matter ; 33(27)2021 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-33906164

RESUMEN

The structure and properties at a finite temperature are critical to understand the temperature effects on energetic materials (EMs). Combining dispersion-corrected density functional theory with quasi-harmonic approximation, the thermodynamic properties for several representative EMs, including nitromethane, PETN, HMX, and TATB, are calculated. The inclusion of zero-point energy and temperature effect could significantly improve the accuracy of lattice parameters at ambient condition; the deviations of calculated cell volumes and experimental values at room temperature are within 0.62%. The calculated lattice parameters and thermal expansion coefficients with increasing temperature show strong anisotropy. In particular, the expansion rate (2.61%) of inter-layer direction of TATB is higher than intra-layer direction and other EMs. Furthermore, the calculated heat capacities could reproduce the experimental trends and enrich the thermodynamic data set at finite temperatures. The predicted isothermal and adiabatic bulk moduli could reflect the softening behavior of EMs. These results would fundamentally provide a deep understanding and serve as a reference for the experimental measurement of the thermodynamic parameters of EMs.

8.
J Phys Condens Matter ; 33(17)2021 Apr 16.
Artículo en Inglés | MEDLINE | ID: mdl-33176283

RESUMEN

Two approaches to simulations of phonon properties of solids beyond the harmonic approximation, the self-consistentab initiolattice dynamics (SCAILD) and decoupled anharmonic mode approximation (DAMA) are critically benchmarked against each other and molecular dynamics simulations using a density-functional-theory description of electronic states, and compared to experimental data for fcc aluminium. The temperature-dependence of phonon dispersion and the phonon density-of-states, heat capacity, and the mean atomic displacement for fcc aluminium are examined with these approaches at ambient pressure. A comparison of results obtained with the harmonic approximation to the ones predicted by SCAILD and DAMA reveal a negligible anharmonic contribution to phonon frequencies, a small, but significant influence on heat capacity, and a strong effect on atomic mean-square displacement. The phase space accessed with SCAILD and DAMA is reduced relative to molecular and harmonic lattice dynamics simulations. In particular the DAMA results are in good agreement with displacement amplitudes determined by the Debye-Waller factor in x-ray diffraction experiments.

9.
Artículo en Inglés | MEDLINE | ID: mdl-32702683

RESUMEN

We report for the first time, lattice dynamics and, thermodynamic properties of ScXSb (X = Ni, Pd, Pt) half Heusler compounds. Calculations for the structural and electronic properties were performed based on the PBE-GGA density functional theory (DFT). We used the linear response density functional perturbation theory for computations addressing the elastic property, lattice dynamics, and thermodynamic properties. Results for the equilibrium lattice parameter are in reasonable agreement with reports in the existing literature. The electronic band structure behavior and bandgap agree with relevant results in research. The elastic parameters and phonon dispersions establish the mechanical stability of the compounds. Deductions from the tone of the mode-Grüneisen parameter, specific heat capacity difference at constant pressure and volume (Cp - Cv), and thermal expansion favors ScNiSb as the most promising material for thermal conductivity at high temperatures among the three compounds studied. The three compounds obey the Dulong-Petit law at high temperatures. Results for the Dulong-Petit limit is consistent with expectations for solid materials at high temperatures.

10.
Data Brief ; 29: 105265, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32123706

RESUMEN

This article reports a dataset on the thermodynamic and elastic properties of two important raw minerals exploited in georesources and ore mining. The presented data refers to two zinc sulphide polymorphs, namely zinc-blende (low-pressure polymorph, space group F 4 - 3 m ) and rock-salt (high-pressure polymorph, space group F m 3 - m ) [1], and of type-A carbonated apatite, [CAp, Ca10(PO4)6CO3, space group P1] [2]. The data here reported were calculated from ab initio quantum mechanical simulations at the DFT/B3LYP level, all-electron Gaussian-type orbitals basis sets and from the analysis of the phonon properties of the zinc sulphide polymorphs and of type-A CAp by means of the quasi-harmonic approximation. In addition, a correction to take into account the effects of dispersive forces was considered to obtain the dataset of type-A carbonated apatite. This dataset, which was validated against experimental thermodynamic data reported in literature, has been employed to construct the phase diagram between the two zinc sulphide polymorphs and discuss their stability over the temperature and pressure range 0-800 K and 0-25 GPa. The thermodynamic and thermoelastic data of CAp were obtained between 0 and 600 K and 0-3 GPa, below the temperature of thermal decomposition of the mineral. The reported data can be of use in several application fields, for instance fundamental georesource exploration and exploitation, and also in applied mineralogy, geology, material science, and as a reference to assess the quality of other theoretical approaches. Furthermore, the data of type-A carbonated apatite could be useful for designing and processing new biomaterials with tailored properties.

11.
Nano Lett ; 19(8): 4941-4948, 2019 Aug 14.
Artículo en Inglés | MEDLINE | ID: mdl-31265307

RESUMEN

Two-dimensional (2D) van der Waals material tin selenide (SnSe) has recently attracted intensive interest due to its exceptional thermoelectric performance. However, the thermal properties and phonon transport mechanisms in its single-crystal form remain elusive. Here, we measured high-quality SnSe single crystals using nanoscale thermometry based on ultrafast optical spectroscopy and found that its intrinsic thermal conductivity is highly anisotropic in different crystallographic directions. To quantify phonon anharmonicity, we developed a new experimental approach combining picosecond ultrasonics and X-ray diffraction to enable direct measurement of temperature-dependent sound velocity, thermal expansion coefficient, and Grüneisen parameter. The measured Grüneisen parameter suggests an abnormally large temperature effect on phonon dispersion that contributes to over 90% of phonon frequency shifts. Furthermore, we performed ab initio calculations using different methods: in comparison with self-consistent phonon theory, the harmonic and quasi-harmonic models that have been widely used in current phonon calculations fail to accurately predict these important thermophysical properties at room temperature and below. Our study reveals an extremely strong intrinsic anharmonicity in SnSe that introduces phonon renormalization near room temperature. This study represents an important research benchmark in characterizing high-performance thermal energy materials and provides fundamental insight into advancing modern calculation methods for phonon transport theory.

12.
Nanomaterials (Basel) ; 9(5)2019 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-31083355

RESUMEN

We have mostly performed vibrational studies of Type-II silicon-germanium clathrate alloys, namely, Si136-xGex (0 < x ≤ 128), using periodic density functional theory (DFT). Our computed lattice constant for various stoichiometric amount, namely, x, of Ge agrees to some extent with the observed X-ray diffraction (XRD) data, along with monotonically increasing dependence on x. According to our bandgap energy calculation via Vienna ab initio simulation package (VASP), Si128Ge8 has a "nearly-direct" bandgap of approximately 1.27 eV, which agrees well with the previously calculated result (~1.23 eV), which was obtained using the Cambridge sequential simulation total energy package (CASTEP). Most of our first-principles calculations focus on exploring the low-energy transverse acoustic (TA) phonons that contribute dominantly to the induction of negative thermal expansion (NTE) behavior. Moreover, our work has predicted that the Si104Ge32 framework exhibits NTE in the temperature range of 3-80 K, compared to the temperature regime (10-140 K) of NTE observed in such pure Si136. It is posited that the increased number of Ge-Ge bonds may weaken the NTE effect substantially, as the composition, which is denoted as x, in Si136-xGex is elevated from 32 (or 40) to 96 (or 104).

13.
Materials (Basel) ; 12(8)2019 Apr 19.
Artículo en Inglés | MEDLINE | ID: mdl-31010157

RESUMEN

Anisotropic thermal expansion coefficients of tetragonal γ -TiAl and hexagonal α 2 -Ti3Al phases were calculated using first principles methods. Two approaches with different computational costs and degrees of freedom were proposed. The predicted values were compared with available experimental data showing that for γ -TiAl, the more computational demanding method with decoupled impact of volume and temperature effects on the cell shape leads to significantly better results than that with only ground-state optimised unit cell geometry. In the case of the α 2 -Ti3Al phase, both approaches yielded comparable results. Additionally, heat capacity and bulk modulus were evaluated as functions of temperature for both phases, and were fitted to provide an analytical formula which can be further used.

14.
Acta Crystallogr B Struct Sci Cryst Eng Mater ; 75(Pt 6): 1042-1059, 2019 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-32830684

RESUMEN

In the present work, an extensive and detailed theoretical investigation is reported on the thermomechanical, electronic and thermodynamic properties of zinc-blende (sphalerite, zb-ZnS) and rock-salt zinc sulfide (rs-ZnS) over a wide range of pressure, by means of ab initio Density Functional Theory, Gaussian type orbitals and the well known B3LYP functional. For the first time, vibrational frequencies, phonon dispersion relations, elasto-piezo-dielectric tensor, thermodynamic and thermomechanical properties of rs-ZnS were calculated with a consistent approach that allows a direct comparison with the low-pressure polymorph. Special attention was paid to the evaluation of the thermodynamic pressure-temperature stability of the mineral phases between 0-25 GPa and 0-800 K. The static (T = 0 K) bulk moduli of sphalerite and rock-salt ZnS were 72.63 (3) GPa and 84.39 (5) GPa, respectively. The phase transition in static conditions calculated from the equation of state was about 15.5 GPa, whereas the elastic constants data resulted in Ptrans = 14.6 GPa. At room temperature (300 K), the zb-rs transition occurs at 14.70 GPa and a negative Clapeyron slope (dP)/(dT) = 0.0023 was observed up to 800 K. The electronic band structure showed a direct band gap for zb-ZnS (Eg = 4.830 eV at equilibrium geometry), which became an indirect one by increasing pressure above 11 GPa. The results were found to be in good agreement with the available experimental and theoretical data, further extending the knowledge of important properties of zinc sulfide, in particular the thermomechanical ones of the rock-salt polymorph here extensively explored for the first time.

15.
Front Chem ; 6: 296, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30105223

RESUMEN

We present a study of the origin of the negative thermal expansion (NTE) on ZrW2O8 by combining an efficient approach for computing the dynamical matrix with the Lanczos algorithm for generating the phonon density of states in the quasi-harmonic approximation. The simulations show that the NTE arises primarily from the motion of the O-sublattice, and in particular, from the transverse motion of the O atoms in the W-O and W-O-Zr bonds. In the low frequency range these combine to keep the WO4 tetrahedra rigid and induce internal distortions in the ZrO6 octahedra. The force constants associated with these distortions become stronger with expansion, resulting in negative Grüneisen parameters and NTE from the low frequency modes that dominate the positive contributions from the high frequency modes. This leads us to propose an anharmonic, two-frequency Einstein model that quantitatively captures the NTE behavior.

16.
Acta Crystallogr B Struct Sci Cryst Eng Mater ; 72(Pt 4): 514-29, 2016 08 01.
Artículo en Inglés | MEDLINE | ID: mdl-27484373

RESUMEN

Molecular crystals expand appreciably upon heating due to both zero-point and thermal vibrational motion, yet this expansion is often neglected in molecular crystal modeling studies. Here, a quasi-harmonic approximation is coupled with fragment-based hybrid many-body interaction calculations to predict thermal expansion and finite-temperature thermochemical properties in crystalline carbon dioxide, ice Ih, acetic acid and imidazole. Fragment-based second-order Möller-Plesset perturbation theory (MP2) and coupled cluster theory with singles, doubles and perturbative triples [CCSD(T)] predict the thermal expansion and the temperature dependence of the enthalpies, entropies and Gibbs free energies of sublimation in good agreement with experiment. The errors introduced by neglecting thermal expansion in the enthalpy and entropy cancel somewhat in the Gibbs free energy. The resulting ∼ 1-2 kJ mol(-1) errors in the free energy near room temperature are comparable to or smaller than the errors expected from the electronic structure treatment, but they may be sufficiently large to affect free-energy rankings among energetically close polymorphs.

17.
J Res Natl Bur Stand A Phys Chem ; 77A(4): 407-409, 1973.
Artículo en Inglés | MEDLINE | ID: mdl-32189751

RESUMEN

The validity of the Grüneisen equation of state for a solid having a continuous distribution of frequencies is investigated. It is shown that one cannot generally replace ∂S/∂V with the heat capacity multiplied by appropriate Grüneisen constants. A model frequency distribution is used to show the difference that can arise.

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