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BACKGROUND: Elemental mapping (EM) yields necessary insights into mechanisms of interest in solid samples across multiple disciplines. There are several EM techniques available but long acquisition time is a common limitation. Glow discharge optical emission spectroscopy (GDOES) allows direct quantitative multi-EM at very high throughput (∼10 s s) when coupled to traditional hyperspectral imaging (HSI) techniques. However, GDOES consumes the sample via sputtering, such that traditional HSI sequential scanning requirements lead to loss of information/resolution, which is compounded for multi-EM and limits nanomaterials analysis. Thus, there is a need for faster HSI to enable GDOES multi-EM of nanoscale materials. RESULTS: Here, a new technique is described, Glow discharge Optical emission Coded Aperture elemental Mapping (GOCAM), that takes advantage of compressive coded aperture spectral imaging to enable multi-EM in a single camera exposure. In this first phase of development, computer model simulations were implemented to study the effects of coded aperture parameters on data fidelity, which showed the best fidelity is achieved at smaller mask element sizes and transmittance of 60 %. In addition, SeSCIGPU demonstrated the best fidelity performance compared to several compressed sensing reconstruction algorithms, including TwIST, GAP-TV, SeSCICPU, and ADMM-TV, as evaluated by studying the effects of varying the corresponding hyperparameters. SIGNIFICANCE: This study shows GOCAM's feasibility and provides a starting point for the second phase hardware development currently underway. GOCAM's potential to allow multi-EM from solid surfaces in a fraction of a second will be particularly enabling for nanostructured materials characterization.

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Objective.3D-localization of gamma sources has the potential to improve the outcome of radio-guided surgery. The goal of this paper is to analyze the localization accuracy for point-like sources with a single coded aperture camera.Approach.We both simulated and measured a point-like241Am source at 17 positions distributed within the field of view of an experimental gamma camera. The setup includes a0.11mmthick Tungsten sheet with a MURA mask of rank 31 and pinholes of0.08mmin diameter and a detector based on the photon counting readout circuit Timepix3. Two methods, namely an iterative search including either a symmetric Gaussian fitting or an exponentially modified Gaussian fitting (EMG) and a center of mass method were compared to estimate the 3D source position.Main results.Considering the decreasing axial resolution with source-to-mask distance, the EMG improved the results by a factor of 4 compared to the Gaussian fitting based on the simulated data. Overall, we obtained a mean localization error of0.77mmon the simulated and2.64mmon the experimental data in the imaging range of20-100mm.Significance.This paper shows that despite the low axial resolution, point-like sources in the nearfield can be localized as well as with more sophisticated imaging devices such as stereo cameras. The influence of the source size and the photon count on the imaging and localization accuracy remains an important issue for further research.

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PURPOSE: Handheld gamma cameras with coded aperture collimators are under investigation for intraoperative imaging in nuclear medicine. Coded apertures are a promising collimation technique for applications such as lymph node localization due to their high sensitivity and the possibility of 3D imaging. We evaluated the axial resolution and computational performance of two reconstruction methods. METHODS: An experimental gamma camera was set up consisting of the pixelated semiconductor detector Timepix3 and MURA mask of rank 31 with round holes of 0.08 mm in diameter in a 0.11 mm thick Tungsten sheet. A set of measurements was taken where a point-like gamma source was placed centrally at 21 different positions within the range of 12-100 mm. For each source position, the detector image was reconstructed in 0.5 mm steps around the true source position, resulting in an image stack. The axial resolution was assessed by the full width at half maximum (FWHM) of the contrast-to-noise ratio (CNR) profile along the z-axis of the stack. Two reconstruction methods were compared: MURA Decoding and a 3D maximum likelihood expectation maximization algorithm (3D-MLEM). RESULTS: While taking 4400 times longer in computation, 3D-MLEM yielded a smaller axial FWHM and a higher CNR. The axial resolution degraded from 5.3 mm and 1.8 mm at 12 mm to 42.2 mm and 13.5 mm at 100 mm for MURA Decoding and 3D-MLEM respectively. CONCLUSION: Our results show that the coded aperture enables the depth estimation of single point-like sources in the near field. Here, 3D-MLEM offered a better axial resolution but was computationally much slower than MURA Decoding, whose reconstruction time is compatible with real-time imaging.

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Objective To address the radioactive contamination of wounds caused by transuranic nuclides, wound radiation imaging based on coded aperture imaging technology was investigated. Methods By simulating multiple source terms using Monte Carlo method, the differences in imaging performance between two image reconstruction algorithms under near-field conditions were compared. The effects of detector pixels and detection plane pixels on image resolution were investigated. Results The imaging system was simulated based on the designed dimensions. The simulated imaging field of view was 89.4 mm × 89.4 mm and the simulated angular resolution was 1.98°. Based on the comparison of the average width at half height of the reconstructed point sources under different conditions, it was found that increasing the number of pixels in the detector and detection plane optimized the angular resolution but significantly prolonged the Monte Carlo simulation time. Conclusion According to the simulation results, the parameters of the imaging system can be used to effectively image radioactive contamination. Our results provide methodological support for the measurement of wound contamination caused by transuranic nuclides, and lay the foundation for the development of wound contamination imaging detection systems in the future.

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BACKGROUND: Targeted alpha-particle therapy (TAT) has great promise as a cancer treatment. Arguably the most promising TAT radionuclide that has been proposed is 225 Ac. The development of 225 Ac-based radiopharmaceuticals has been hampered due to the lack of effective means to study the daughter redistribution of these agents in small animals at the preclinical stage. PURPOSE: The ability to directly image the daughters, namely 221 Fr and 213 Bi, via their gamma-ray emissions would be a boon for preclinical studies. That said, conventional medical imaging modalities, including single photon emission computed tomography (SPECT) based on nonmultiplexed collimation, cannot be employed due to sensitivity limitations. METHODS: As an alternative, we propose the use of both coded aperture and Compton imaging with the former modality suited to the 218-keV gamma-ray emission of 221 Fr and the latter suited to the 440-keV gamma-ray emission of 213 Bi. RESULTS: This work includes coded aperture images of 221 Fr and Compton images of 213 Bi in tumor-bearing mice injected with 225 Ac-based radiopharmaceuticals. CONCLUSIONS: These results are the first demonstration of visualizing and quantifying the 225 Ac daughters in small animals through the application of coded aperture and Compton imaging.

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PURPOSE: We designed a prototype compact gamma camera (MediPROBE4) for nuclear medicine tasks, including radio-guided surgery and sentinel lymph node imaging with a 99mTc radiotracer. We performed Monte Carlo (MC) simulations for image performance assessment, and first spectroscopic imaging tests with a 300 µm thick silicon detector. METHODS: The hand-held camera (1 kg weight) is based on a Timepix4 readout circuit for photon-counting, energy-sensitive, hybrid pixel detectors (24.6 × 28.2 mm2 sensitive area, 55 µm pixel pitch), developed by the Medipix4 Collaboration. The camera design adopts a CdTe detector (1 or 2 mm thick) bump-bonded to a Timepix4 readout chip and a coded aperture collimator with 0.25 mm diameter round holes made of 3D printed 1-mm thick tungsten. Image reconstruction is performed via autocorrelation deconvolution. RESULTS: Geant4 MC simulations showed that, for a 99mTc source in air, at 50 mm source-collimator distance, the estimated collimator sensitivity (4 × 10-4) is 292 times larger than that of a single hole in the mask; the system sensitivity is 0.22 cps/kBq (2 mm CdTe); the lateral spatial resolution is 1.7 mm FWHM. The estimated axial longitudinal resolution is 8.2 mm FWHM at 40 mm distance. First experimental tests with a 300 µm thick Silicon pixel detector bump-bonded to a Timepix4 chip and a high-resolution coded aperture collimator showed time-over-threshold and time-of-arrival capabilities with 241Am and 133Ba gamma-ray sources. CONCLUSIONS: MC simulations and validation lab tests showed the expected performance of the MediPROBE4 compact gamma camera for gamma-ray 3D imaging.

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Objective.X-ray diffraction (XRD) has been considered as a valuable diagnostic technology providing material specific 'finger-print' information i.e. XRD pattern to distinguish different biological tissues. XRD tomography (XRDT) further obtains spatial-resolved XRD pattern distribution, which has become a frontier biological sample inspection method. Currently, XRD computed tomography (XRD-CT) featured by the conventional CT scan mode with rotation has the best spatial resolution among various XRDT methods, but its scan process takes hours. Meanwhile, snapshot XRDT methods such as coded-aperture XRDT (CA-XRDT) aim at direct imaging without scan movements. With compressed-sensing acquisition applied, CA-XRDT significantly shortens data acquisition time. However, the snapshot acquisition results in a significant drop in spatial resolution. Hence, we need an advanced XRDT method that significantly accelerates XRD-CT acquisition and still maintains an acceptable imaging accuracy for biological sample inspection.Approach.Inspired by the high spatial resolution of XRD-CT from rotational scan and the fast compressed-sensing acquisition in snapshot CA-XRDT (SnapshotCA-XRDT), we proposed a new XRDT imaging method: sparse-view rotational CA-XRDT (RotationCA-XRDT). It takes SnapshotCA-XRDT as a preliminary depth-resolved XRDT method, and combines rotational scan to significantly improve the spatial resolution. A model-based iterative reconstruction (MBIR) method is adopted for RotationCA-XRDT. Moreover, we suggest a refined system model calculation for the RotationCA-XRDT MBIR which is a key factor to improve reconstruction image quality.Main results.We conducted our experimental validation based on Monte-Carlo simulation for a breast sample. The results show that the proposed RotationCA-XRDT method succeeded in producing good images for detecting 2 mm square carcinoma with a 15-view scan. The spatial resolution is significantly improved from current SnapshotCA-XRDT methods. With our refined system model, MBIR can obtain high quality images with little artifacts.Significance.In this work, we proposed a new high spatial resolution XRDT method combining coded-aperture compressed-sensing acquisition and sparse-view scan. The proposed RotationCA-XRDT method obtained significantly better image resolution than current SnapshotCA-XRDT methods in the field. It is of great potential for biological sample XRDT inspection. The proposed RotationCA-XRDT is the fastest millimetre-resolution XRDT method in the field which reduces the scan time from hours to minutes.

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Coded Aperture (CA) imaging has recently been used in nuclear medicine, but still, there is no commercial SPECT imaging camera based on CA for cancer detection. The literature is rich in examples of using the CA for planar and thin 3D imaging. However, thick 3D reconstruction is still challenging for small lesion detection. This paper presents the results of mosaic modified uniformly redundant array (MURA) mask/antimask CA combined with a maximum-likelihood expectation-maximization (MLEM) algorithm. The MLEM is an iterative algorithm applied to a mosaic MURA CA mask/antimask for 3D anthropomorphic breast phantom reconstruction, slice by slice. The difference between the mask and the antimask suppresses the background noise to enhance the quality of reconstructed images. Furthermore, all reconstructed slices are stacked to form a 3D breast phantom image from single-projection data. The results of phantom reconstruction with 8 mm, 6 mm, 4 mm, and 3 mm lesions are presented. Moreover, the proposed SPECT imaging camera can reconstruct a 3D breast phantom from single-projection data of the patient's scanning. To assess the quality of lesions in the reconstructed images, the contrast-to-background ratio (CBR), the peak signal-to-noise ratio (PSNR) and mean square error (MSE) were measured.

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In this work, we investigate the potential of employing a direct conversion integration mode X-ray detector with micron-scale pixels in two different X-ray phase-contrast imaging (XPCi) configurations, propagation-based (PB) and edge illumination (EI). Both PB-XPCi and EI-XPCi implementations are evaluated through a wave optics model-numerically simulated in MATLAB-and are compared based on their contrast, edge-enhancement, visibility, and dose efficiency characteristics. The EI-XPCi configuration, in general, demonstrates higher performance compared to PB-XPCi, considering a setup with the same X-ray source and detector. However, absorption masks quality (thickness of X-ray absorption material) and environmental vibration effect are two potential challenges for EI-XPCi employing a detector with micron-scale pixels. Simulation results confirm that the behavior of an EI-XPCi system employing a high-resolution detector is susceptible to its absorption masks thickness and misalignment. This work demonstrates the potential and feasibility of employing a high-resolution direct conversion detector for phase-contrast imaging applications where higher dose efficiency, higher contrast images, and a more compact imaging system are of interest.

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Indirect-imaging methods involve at least two steps, namely optical recording and computational reconstruction. The optical-recording process uses an optical modulator that transforms the light from the object into a typical intensity distribution. This distribution is numerically processed to reconstruct the object's image corresponding to different spatial and spectral dimensions. There have been numerous optical-modulation functions and reconstruction methods developed in the past few years for different applications. In most cases, a compatible pair of the optical-modulation function and reconstruction method gives optimal performance. A new reconstruction method, termed nonlinear reconstruction (NLR), was developed in 2017 to reconstruct the object image in the case of optical-scattering modulators. Over the years, it has been revealed that the NLR can reconstruct an object's image modulated by an axicons, bifocal lenses and even exotic spiral diffractive elements, which generate deterministic optical fields. Apparently, NLR seems to be a universal reconstruction method for indirect imaging. In this review, the performance of NLR isinvestigated for many deterministic and stochastic optical fields. Simulation and experimental results for different cases are presented and discussed.

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PURPOSE: Recent studies have demonstrated the ability to rapidly produce large field of view X-ray diffraction (XRD) images, which provide rich new data relevant to the understanding and analysis of disease. However, work has only just begun on developing algorithms that maximize the performance toward decision-making and diagnostic tasks. In this study, we present the implementation of and comparison between rules-based and machine learning (ML) classifiers on XRD images of medically relevant phantoms to explore the potential for increased classification performance. METHODS: Medically relevant phantoms were utilized to provide well-characterized ground-truths for comparing classifier performance. Water and polylactic acid (PLA) plastic were used as surrogates for cancerous and healthy tissue, respectively, and phantoms were created with varying levels of spatial complexity and biologically relevant features for quantitative testing of classifier performance. Our previously developed X-ray scanner was used to acquire co-registered X-ray transmission and diffraction images of the phantoms. For classification algorithms, we explored and compared two rules-based classifiers (cross-correlation, or matched-filter, and linear least-squares unmixing) and two ML classifiers (support vector machines and shallow neural networks). Reference XRD spectra (measured by a commercial diffractometer) were provided to the rules-based algorithms, while 60% of the measured XRD pixels were used for training of the ML algorithms. The area under the receiver operating characteristic curve (AUC) was used as a comparative metric between the classification algorithms, along with the accuracy performance at the midpoint threshold for each classifier. RESULTS: The AUC values for material classification were 0.994 (cross-correlation [CC]), 0.994 (least-squares [LS]), 0.995 (support vector machine [SVM]), and 0.999 (shallow neural network [SNN]). Setting the classification threshold to the midpoint for each classifier resulted in accuracy values of CC = 96.48%, LS = 96.48%, SVM = 97.36%, and SNN = 98.94%. If only considering pixels ±3 mm from water-PLA boundaries (where partial volume effects could occur due to imaging resolution limits), the classification accuracies were CC = 89.32%, LS = 89.32%, SVM = 92.03%, and SNN = 96.79%, demonstrating an even larger improvement produced by the machine-learned algorithms in spatial regions critical for imaging tasks. Classification by transmission data alone produced an AUC of 0.773 and accuracy of 85.45%, well below the performance levels of any of the classifiers applied to XRD image data. CONCLUSIONS: We demonstrated that ML-based classifiers outperformed rules-based approaches in terms of overall classification accuracy and improved the spatially resolved classification performance on XRD images of medical phantoms. In particular, the ML algorithms demonstrated considerably improved performance whenever multiple materials existed in a single voxel. The quantitative performance gains demonstrate an avenue to extract and harness XRD imaging data to improve material analysis for research, industrial, and clinical applications.

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Coded-aperture imagers typically have a smaller field-of-view (FOV) than in un-collimated gamma imaging systems. However, sources out of the fully coded field-of-view (FCFOV) can cause pseudo hotspots on the wrong side of an image reconstructed using the cross-correlation method. In this work, we propose a neural network method to identify and localize the sources within the partially coded field-of-view (PCFOV). The model was trained using Monte Carlo simulation data and evaluated with both simulation and experimental data. The results showed that the proposed model can identify and localize sources with good classification accuracy, low positioning error, and strong robustness to the statistical noise.

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The gamma-ray imaging technique was developed and is widely used in several nuclear engineering fields. Specifically, compared with the traditional point-by-point radiation detector, the coded-aperture gamma camera has advantages of a wide field of view, high angular resolution, and high efficiency. Several methods for characterizing image quality, including the figure of merit (FOM) method and the contrast-to-noise ratio (CNR) method, were assessed and developed. These methods have their respective drawbacks depending on the circumstances. The FOM lacks reliability in exhibiting the impact of background noise fluctuation on the purity of a real image. The CNR characterizes image quality with inconsistent sensitivity while the source moves along the X and Y directions. Therefore, a new CNR method was proposed to achieve better performance and greater consistency in real imaging. With our coded-aperture imaging system developed in the laboratory, we performed simulations within the MATLAB and Geant4 platforms and real imaging experiments to analyze and compare images and the results of these three characterization methods. The results show that the new CNR method is reliable and practical in regard to real imaging performance.

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One of the main concerns regarding medical imaging is the danger tissue's ionizing due to the applied radiation. Many medical procedures are based on this ionizing radiation (such as X-rays and Gamma radiation). This radiation allows the physician to perform diagnosis inside the human body. Still, the main concern is stochastic effects to the DNA, particularly the cause of cancer. The radiation dose endangers not only the patient but also the medical staff, who might be close to the patient and be exposed to this dangerous radiation in a daily manner. This paper presents a novel concept of radiation reduced Computed Tomography (CT) scans. The proposed concept includes two main methods: minification to enhance the energy concertation per pixel and subpixel resolution enhancement, using shifted images, to preserve resolution. The proposed process uses several pinhole masks as the base of the imaging modality. The proposed concept was validated numerically and experimentally and has demonstrated the capability of reducing the radiation efficiency by factor 4, being highly significant to the world of radiology and CT scans. This dose reduction allows a safer imaging process for the patient and the medical staff. This method simplifies the system and improves the obtained image quality. The proposed method can contribute additively to standard existing dose reduction or super-resolution techniques to achieve even better performance.

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The design and construction of an instrument for full-field imaging of the X-ray fluorescence emitted by a fully illuminated sample are presented. The aim is to produce an X-ray microscope with a few micrometers spatial resolution, which does not need to scan the sample. Since the fluorescence from a spatially inhomogeneous sample may contain many fluorescence lines, the optic which will provide the magnification of the emissions must be achromatic, i.e. its optical properties must be energy-independent. The only optics which fulfill this requirement in the X-ray regime are mirrors and pinholes. The throughput of a simple pinhole is very low, so the concept of coded apertures is an attractive extension which improves the throughput by having many pinholes, and retains the achromatic property. Modified uniformly redundant arrays (MURAs) with 10 µm openings and 50% open area have been fabricated using gold in a lithographic technique, fabricated on a 1 µm-thick silicon nitride membrane. The gold is 25 µm thick, offering good contrast up to 20 keV. The silicon nitride is transparent down into the soft X-ray region. MURAs with various orders, from 19 up to 73, as well as their respective negative (a mask where open and closed positions are inversed compared with the original mask), have been made. Having both signs of mask will reduce near-field artifacts and make it possible to correct for any lack of contrast.

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Biomedical planar imaging using gamma radiation is a very important screening tool for medical diagnostics. Since lens imaging is not available in gamma imaging, the current methods use lead collimator or pinhole techniques to perform imaging. However, due to ineffective utilization of the gamma radiation emitted from the patient's body and the radioactive dose limit in patients, poor image signal to noise ratio (SNR) and long image capturing time are evident. Furthermore, the resolution is related to the pinhole diameter, thus there is a tradeoff between SNR and resolution. Our objectives are to reduce the radioactive dose given to the patient and to preserve or improve SNR, resolution and capturing time while incorporating three-dimensional capabilities in existing gamma imaging systems. The proposed imaging system is based on super-resolved time-multiplexing methods using both variable and moving pinhole arrays. Simulations were performed both in MATLAB and GEANT4, and gamma single photon emission computed tomography (SPECT) experiments were conducted to support theory and simulations. The proposed method is able to reduce the radioactive dose and image capturing time and to improve SNR and resolution. The results and method enhance the gamma imaging capabilities that exist in current systems, while providing three-dimensional data on the object.

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The aim of this work was to assess the performance of a prototype compact gamma camera (MediPROBE) based on a CdTe semiconductor hybrid pixel detector, for coded aperture imaging. This probe can be adopted for various tasks in nuclear medicine such as preoperative sentinel lymph node localization, breast imaging with 99mTc radiotracers and thyroid imaging, and in general in radioguided surgery tasks. The hybrid detector is an assembly of a 1-mm thick CdTe semiconductor detector bump-bonded to a photon-counting CMOS readout circuit of the Medipix2 series or energy-sensitive Timepix detector. MediPROBE was equipped with a set of two coded aperture masks with 0.07-mm or 0.08-mm diameter holes. We performed laboratory measurements of field of view, system spatial resolution, and signal-difference-to-noise ratio, by using gamma-emitting radioactive sources (109Cd, 125I, 241Am, 99mTc). The system spatial resolution in the lateral direction was 0.56 mm FWHM (coded aperture mask with holes of 0.08 mm and a 60 keV source) at a source-collimator distance of 50 mm and a field of view of 40 mm by side. Correspondingly, the longitudinal resolution in 3D source localization tasks was about 3 mm. MediPROBE showed a significant improvement in terms of spatial resolution when equipped with the high-resolution coded apertures, with respect to the performance previously reported with 1-2 mm pinhole apertures as well as with respect to adopting a 0.35 mm pinhole aperture.

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Phaseless terahertz coded-aperture imaging (PL-TCAI) is a novel radar computational imaging method that utilizes the coded aperture and the incoherent detector array to achieve forward-looking and high-resolution imaging without relying on relative motion. In this paper, we propose a more reasonable and compact architecture for the PL-TCAI system and derive the imaging model of PL-TCAI based on the random frequency-hopping signal. Since most phase retrieval algorithms for PL-TCAI utilize only the intensity of echo signals to accurately reconstruct the target, excessive measurement samples are usually required. In order to reduce the number of measurement samples required for imaging, this paper proposes a sparse Wirtinger flow algorithm with optimal stepsize (SWFOS) by using the sparse prior of the target. The specific procedures of the SWFOS algorithm include the support recovery, initialization by truncated spectral method, iteration via gradient descent scheme, hard threshold operation, and stepsize optimization of iteration. Numerical simulations are performed, and the results show that the SWFOS algorithm not only has good performance for the PR problem, but can also sharply reduce the number of measurement samples required for imaging in the PL-TCAI system.

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In this paper, we propose a phaseless terahertz coded-aperture imaging (PTCAI) method by using a single incoherent detector or an incoherent detection array. We at first analyze and model the system architecture, derive the matrix imaging equation, and then study the phase retrieval techniques to reconstruct the original target with high resolution. Numerical experiments are performed and the results show that the proposed method can significantly reduce the system complexity in the receiving process while maintaining high resolution imaging capability. Furthermore, the approach of using incoherent detection array instead of single detector is capable of decreasing the encoding and sampling times, and therefore helps to improve the imaging frame rate. In our future research, the method proposed in this paper will be experimentally tested and validated, and high-speed PTCAI at nearly real-time frame rates will be the main work.

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Research on snapshot multispectral imaging has been popular in the remote sensing community due to the high demands of video-rate remote sensing system for various applications. Existing snapshot multispectral imaging techniques are mainly of a fixed wavelength type, which limits their practical usefulness. This paper describes a tunable multispectral snapshot system by using a dual prism assembly as the dispersion element of the coded aperture snapshot spectral imagers (CASSI). Spectral tuning is achieved by adjusting the air gap displacement of the dual prism assembly. Typical spectral shifts of about 1 nm at 400 nm and 12 nm at 700 nm wavelength have been achieved in the present design when the air-gap of the dual prism is changed from 4.24 mm to 5.04 mm. The paper outlines the optical designs, the performance, and the pros and cons of the dual-prism CASSI (DP-CASSI) system. The performance of the system is illustrated by TraceProTM ray tracing, to allow researchers in the field to repeat or to validate the results presented in this paper.