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1.
Mol Biol Rep ; 51(1): 967, 2024 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-39249572

RESUMEN

BACKGROUND: Protists are diverse single-celled eukaryotes found in various habitats. They exhibit a wide range of forms and functions, representing a significant portion of the eukaryotic tree of life, which also includes animals, plants, and fungi. Due to their high sensitivity to environmental changes, these organisms are widely used as biological indicators of organic pollution. METHODS AND RESULTS: We investigated the molecular diversity of ciliate protists at seven strategic points along the Sapucaí River (Itajubá, Minas Gerais State, Brazil), to assess the impact of urban pollution on the richness, abundance, and diversity indexes of these communities. For each sampling point, values of physicochemical parameters were also recorded. DNA sequences were obtained by high-throughput sequencing (HTS) and analyzed using the V4 18S-rRNA molecular marker, employing the DNA metabarcoding method. We recorded 125 ciliate taxonomic units (OTUs), with nearly 80% corresponding to the classes Spirotrichea, Oligohymenophorea, and Litostomatea. At the genus level, 54 OTUs (43.2%) were identified, spanning 28 genera. CONCLUSIONS: The composition of ciliates varied significantly along the river's course, from upstream to downstream of Itajubá city. Samples collected from the urban area displayed the lowest richness and diversity, corroborating the influence of the pollution gradient on these communities. The physicochemical parameters showed little variation among the samples and were not linked to the observed changes in ciliate communities, revealing that these organisms are strongly affected by environmental changes and respond more sensitively to these disturbances than physicochemical parameters, emphasizing their potential as bioindicators.


Asunto(s)
Biodiversidad , Cilióforos , Código de Barras del ADN Taxonómico , Ríos , Brasil , Ríos/parasitología , Código de Barras del ADN Taxonómico/métodos , Cilióforos/genética , ARN Ribosómico 18S/genética , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Filogenia , Monitoreo del Ambiente/métodos
2.
Artículo en Inglés | MEDLINE | ID: mdl-39262112

RESUMEN

The increase in the frequency and intensity of droughts and heatwaves caused by climate change poses a major threat to biodiversity. In aquatic systems, sedentary species such as freshwater mussels are generally considered more vulnerable to changes in habitat conditions than mobile species such as fish. As mussels provide important ecosystem services, understanding the impacts of drought on freshwater mussels is of particular importance for the management of overall functioning of aquatic ecosystems. We used a comprehensive literature search to provide a systematic overview of direct and indirect effects of drought on freshwater mussels (Bivalvia: Unionida) and an evaluation of mitigation strategies. We found that drought studies were concentrated mostly in the USA, with a focus on the Unionidae family. Topics ranged from the physiological effects of high temperatures, emersion, and hypoxia/anoxia to behavioural and reproductive consequences of drought and the implications for biotic interactions and ecosystem services. Studies spanned all levels of biological organization, from individual responses to population- and community-level impacts and ecosystem-wide effects. We identified several knowledge gaps, including a paucity of trait-based evaluation of drought consequences, limited understanding of thermal and desiccation tolerance at the species level, and the synergistic effects of multiple drought stressors on mussels. Although we found many studies provided suggestions concerning management of populations, habitat conditions, and anthropogenic water use, a systematic approach and testing of recommended mitigation strategies is largely lacking, creating challenges for managers aiming to conserve freshwater mussel communities and populations in light of climate change.

3.
J Phycol ; 2024 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-39289900

RESUMEN

Culture collections such as the Blue Biotechnology and Ecotoxicology Culture Collection (LEGE-CC) hold approximately 1200 cyanobacterial strains and are critical community resources. However, many isolates in this and other collections have not been described with a polyphasic approach, and this limits further study. Here, we employed a polyphasic methodology that integrates 16S rRNA gene phylogenetic analyses, similarity (p-distance), 16S-23S ITS rRNA region secondary structures, morphological analyses, and habitat assessments to describe four novel cyanobacterial genera from the LEGE-CC, Portugal. Pseudolimnococcus planktonicus gen. et sp. nov. (Chroococcales) is phylogenetically and morphologically related to Limnococcus. The 16S rRNA gene similarity between the types of both genera is only 93.1%. Morphologically, Pseudolimnococcus cells do not reach the original spherical shape before the next division or have aerotopes and firm mucilage, while Limnococcus cells reach the original shape, lack aerotopes, and have diffluent mucilage. Eucapsopsis lusitanus gen. et sp. nov. (Chroococcales) is morphologically similar to Eucapsis but differs from it by having aerotopes and diffluent envelope. Eucapsis lacks aerotopes and has firm mucilaginous envelopes, rarely diffluent. Both genera are phylogenetically very distant from each other and have only 90.68% 16S rRNA gene similarity. Pseudoacaryochloris arrabidensis gen. et sp. nov. (Acaryochloridales) differs from Acaryochloris by the lack of mucilaginous envelope, which is present in Acaryochloris. Both genera are phylogenetically distant and have only 94.1% 16S rRNA gene similarity. Moreover, Acaryochloris is marine (sponge symbiont), while Pseudoacaryochloris is from freshwater. Vasconcelosia minhoensis gen. et sp. nov. (Nodosilineales) is phylogenetically related to Cymatolege but has only 94.3% similarity with this genus. Morphologically both genera are distinct. Vasconcelosia has a Romeria-like structure, while Cymatolege has a Phormidium-like structure. In all cases the 16S-23S ITS rRNA region secondary structures are in agreement with the other analyses. These novel genera expand the diversity of cyanobacteria in culture collections.

4.
Heliyon ; 10(17): e36829, 2024 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-39281619

RESUMEN

Preserving fungal tissue DNA in the field is essential for molecular ecological research, enabling the study of fungal biodiversity and community dynamics. This study systematically compares two liquid-based preservation solutions, RNAlater and DESS, for their effectiveness in maintaining macrofungi DNA integrity during field collection and storage. The research encompasses both controlled experiments and real-world field collections. In the controlled experiments, two fungal species were preserved in RNAlater and DESS at different temperatures and durations. DNA extraction success rates were high, but DNA quality and quantity metrics exhibited variations across samples. However, both preservation solutions demonstrated their viability for preserving fungal DNA, with no significant differences between them. In the field-collected macrofungi experiment, 160 paired fungal specimens were preserved in RNAlater and DESS, respectively. Including a drying process to facilitate tissue lysis for DNA extraction significantly impacted the outcomes. RNAlater showed a higher success rate and better DNA quality and quantity compared to DESS. Statistical analysis, including paired and independent t-tests, confirmed significant differences in DNA quality and quantity between the two preservation methods for field-collected samples. This study evaluates RNAlater and DESS for preserving macrofungi DNA in field conditions. Both methods are effective, but RNAlater is superior when a drying step is included in DNA extraction. Researchers can choose based on their specific needs without compromising DNA integrity. These findings advance fungal molecular ecology and DNA preservation strategies in ecological and environmental studies.

5.
Heliyon ; 10(17): e36196, 2024 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-39281649

RESUMEN

Farmers in Ethiopia have been vulnerable to climate change in recent decades. In the face of this change, farmers have managed agroforestry systems to maintain their livelihoods. However, studies exploring the role of agroforestry in reducing household vulnerability are lacking in Northwestern Ethiopia. The objectives of the study were to (i) investigate households' livelihoods vulnerability to climate change in Northwestern Ethiopia; (iii) assess the role of agroforestry in mitigating the negative impacts of climate change on farmers livelihoods. Key informant interviews, in-depth interviews, household surveys (387), and focus group discussions were used to collect the data. Descriptive statistics, principal component analysis, the X2-test, and the t-test were run to analyze the data. The findings revealed that households are vulnerable to rising temperatures, rainfall variability, frost, disease and pests, erosion, hailstorms, price hikes, wildlife damage to crops, and health stress. Agroforestry non-practitioners had a higher livelihood vulnerability index (LVI) (0.42 ± 0.081) than practitioners (0.46 ± 0.079). The Livelihood Vulnerability-Intergovernmental Panel for Climate Change Index (LVI-IPCC) showed that AF non-practitioners had a higher exposure (0.58), sensitivity (0.54) index, and a lower adaptive capacity index (0.44) than the exposure (0.34), sensitivity (0.38), and adaptive capacity index (0.51) of practitioners. Plant diversity, income level and diversity, livelihood activities, social network, and food security status of farmers were improved by agroforestry. Farmers were therefore less susceptible to adverse climate shocks. Thus, the AF system could be part of future adaptation and resilience programs that provide dependable tools to minimize households' vulnerability to climate shocks. However, management guidelines, such as understanding local ecosystems, setting clear objectives, choosing suitable species, planning for diversity, considering the market, and regular maintenance and monitoring, are needed for agroforestry to improve its contribution.

6.
PeerJ ; 12: e18013, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-39282116

RESUMEN

Bioplastics are emerging as a promising alternative to traditional plastics, driven by the need for more sustainable options. This review article offers an in-depth analysis of the entire life cycle of bioplastics, from raw material cultivation to manufacturing and disposal, with a focus on environmental impacts at each stage. It emphasizes the significance of adopting sustainable agricultural practices and selecting appropriate feedstock to improve environmental outcomes. The review highlights the detrimental effects of unsustainable farming methods, such as pesticide use and deforestation, which can lead to soil erosion, water pollution, habitat destruction, and increased greenhouse gas emissions. To address these challenges, the article advocates for the use of efficient extraction techniques and renewable energy sources, prioritizing environmental considerations throughout the production process. Furthermore, the methods for reducing energy consumption, water usage, and chemical inputs during manufacturing by implementing eco-friendly technologies. It stresses the importance of developing robust disposal systems for biodegradable materials and supports recycling initiatives to minimize the need for new resources. The holistic approach to sustainability, including responsible feedstock cultivation, efficient production practices, and effective end-of-life management. It underscores the need to evaluate the potential of bioplastics to reduce plastic pollution, considering technological advancements, infrastructure development, and increased consumer awareness. Future research should focus on enhancing production sustainability, understanding long-term ecological impacts, and advancing bioplastics technology for better performance and environmental compatibility. This comprehensive analysis of bioplastics' ecological footprint highlights the urgent need for sustainable solutions in plastic production.


Asunto(s)
Biodiversidad , Conservación de los Recursos Naturales , Administración de Residuos , Administración de Residuos/métodos , Conservación de los Recursos Naturales/métodos , Agricultura/métodos , Plásticos/química , Reciclaje/métodos , Plásticos Biodegradables/química , Contaminación Ambiental/prevención & control
7.
Anim Reprod ; 21(3): e20240049, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-39286364

RESUMEN

Over the past 40 years, assisted reproductive technologies (ARTs) have grown significantly in scale and innovation, from the bovine embryo industry's shift from in vivo derived to in vitro produced embryos and the development of somatic cell-based approaches for embryo production. Domestic animal models have been instrumental in the development of ARTs for wildlife species in support of the One Plan Approach to species conservation that integrates in situ and ex situ population management strategies. While ARTs are not the sole solution to the biodiversity crisis, they can offer opportunities to maintain, and even improve, the genetic composition of the captive and wild gene pools over time. This review focuses on the application of sperm and embryo technologies (artificial insemination and multiple ovulation/in vitro produced embryo transfer, respectively) in wildlife species, highlighting impactful cases in which significant progress or innovation has transpired. One of the key messages following decades of efforts in this field is the importance of collaboration between researchers and practitioners from zoological, academic, governmental, and private sectors.

8.
Mol Ecol ; : e17529, 2024 Sep 18.
Artículo en Inglés | MEDLINE | ID: mdl-39290075

RESUMEN

Ectomycorrhizal (ECM) fungi are important tree symbionts within forests. The biogeography of ECM fungi remains to be investigated because it is challenging to observe and identify species. Because most ECM plant taxa have a Holarctic distribution, it is difficult to evaluate the extent to which host preference restricts the global distribution of ECM fungi. To address this issue, we aimed to assess whether host preference enhances the endemism of ECM fungi that inhabit dipterocarp rainforests. Highly similar sequences of 175 operational taxonomic units (OTUs) for ECM fungi that were obtained from Lambir Hill's National Park, Sarawak, Malaysia, were searched for in a nucleotide sequence database. Using a two-step binomial model, the probability of presence for the query OTUs and the registration rate of barcode sequences in each country were simultaneously estimated. The results revealed that the probability of presence in the respective countries increased with increasing species richness of Dipterocarpaceae and decreasing geographical distance from the study site (i.e. Lambir). Furthermore, most of the ECM fungi were shown to be endemic to Malaysia and neighbouring countries. These findings suggest that not only dispersal limitation but also host preference are responsible for the high endemism of ECM fungi in dipterocarp rainforests. Moreover, host preference likely determines the areas where ECM fungi potentially expand and dispersal limitation creates distance-decay patterns within suitable habitats. Although host preference has received less attention than dispersal limitation, our findings support that host preference has a profound influence on the global distribution of ECM fungi.

9.
Plant Divers ; 46(5): 565-574, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39290891

RESUMEN

Mountain biodiversity is of great importance to biogeography and ecology. However, it is unclear what ecological and evolutionary processes best explain the generation and maintenance of its high levels of species diversity. In this study, we determined which of six common hypotheses (e.g., climate hypotheses, habitat heterogeneity hypothesis and island biogeography theory) best explain global patterns of species diversity in Rhododendron. We found that Rhododendron diversity patterns were most strongly explained by proxies of island biogeography theory (i.e., mountain area) and habitat heterogeneity (i.e., elevation range). When we examined other relationships important to island biogeography theory, we found that the planimetric area and the volume of mountains were positively correlated with the Rhododendron diversity, whereas the 'mountains-to-mainland' distance was negatively correlated with Rhododendron diversity and shared species. Our findings demonstrate that Rhododendron diversity can be explained by island biogeography theory and habitat heterogeneity, and mountains can be regarded as islands which supported island biogeography theory.

10.
Plant Divers ; 46(5): 661-670, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39290890

RESUMEN

Reproductive strategies of sexually dimorphic plants vary in response to the environment. Here, we ask whether the sexual systems of Fagopyrum species (i.e., selfing homostylous and out-crossing distylous) represent distinct adaptive strategies to increase reproductive success in changing alpine environments. To answer this question, we determined how spatial and temporal factors (e.g., elevation and peak flowering time) affect reproductive success (i.e., stigmatic pollen load) in nine wild Fagopyrum species (seven distylous and two homostylous) among 28 populations along an elevation gradient of 1299-3315 m in the Hengduan Mountains, southwestern China. We also observed pollinators and conducted hundreds of hand pollinations to investigate inter/intra-morph compatibility, self-compatibility and pollen limitation in four Fagopyrum species (two distylous and two homostylous). We found that Fagopyrum species at higher elevation generally had bigger flowers and more stigmatic pollen loads; late-flowering individuals had smaller flowers and lower pollen deposition. Stigmatic pollen deposition was more variable in distylous species than in homostylous species. Although seed set was not pollen-limited in all species, we found that fruit set was much lower in distylous species, which rely on frequent pollinator visits, than in homostylous species capable of autonomous self-pollination. Our findings that pollination success increases at high elevations and decreases during the flowering season suggest that distylous and homostylous species have spatially and temporally distinct reproductive strategies related to environment-dependent pollinator activity.

11.
Proc Biol Sci ; 291(2031): 20240642, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39288804

RESUMEN

Nutrient addition, particularly nitrogen, often increases plant aboveground biomass but causes species loss. Asymmetric competition for light is frequently assumed to explain the biomass-driven species loss. However, it remains unclear whether other factors such as water can also play a role. Increased aboveground leaf area following nitrogen addition and warming may increase transpiration and cause water limitation, leading to a decline in diversity. To test this, we conducted field measurements in a grassland community exposed to nitrogen and water addition, and warming. We found that warming and/or nitrogen addition significantly increased aboveground biomass but reduced species richness. Water addition prevented species loss in either nitrogen-enriched or warmed treatments, while it partially mitigated species loss in the treatment exposed to increases in both temperature and nitrogen. These findings thus strongly suggest that water limitation can be an important driver of species loss as biomass increases after nitrogen addition and warming when soil moisture is limiting. This result is further supported by a meta-analysis of published studies across grasslands worldwide. Our study indicates that loss of grassland species richness in the future may be greatest under a scenario of increasing temperature and nitrogen deposition, but decreasing precipitation.


Asunto(s)
Biodiversidad , Biomasa , Pradera , Nitrógeno , Agua , Nitrógeno/metabolismo , Temperatura , Calentamiento Global , Poaceae/fisiología
12.
Biol Lett ; 20(9): 20240283, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39288815

RESUMEN

Compelling evidence for feedbacks between commodity crop production systems and local ecosystems has led to predictions that biodiversity loss could threaten food security. However, for this to happen agricultural production systems must both impact and depend on the same components of biodiversity. Here, we review the evidence for and against the simultaneous impacts and dependencies of eight important commodity crops on biodiversity. We evaluate the risk that pollination, pest control or biodiversity-mediated soil health maintenance services are at risk from local biodiversity loss. We find that for key species groups such as ants, bees and birds, the production of commodities including coffee, cocoa and soya bean is indeed likely to be at risk from local biodiversity loss. However, we also identify several combinations of commodity, ecosystem service and component of biodiversity that are unlikely to lead to reinforcing feedbacks and lose-lose outcomes for biodiversity and agriculture. Furthermore, there are significant gaps in the evidence both for and against a mutualism between biodiversity and agricultural commodity production, highlighting the need for more evaluation of the importance of specific biodiversity groups to agricultural systems globally.


Asunto(s)
Agricultura , Biodiversidad , Productos Agrícolas , Animales , Polinización , Conservación de los Recursos Naturales , Control de Plagas
13.
FEMS Microbiol Ecol ; 2024 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-39289026

RESUMEN

Mt. Erebus, Antarctica, is the southernmost active volcano in the world and harbors diverse geothermally unique ecosystems, including 'Subglacial' and 'Exposed' features, surrounded by a vast desert of ice and snow. Previous studies, while limited in scope, have highlighted the unique and potentially endemic biota of Mt. Erebus. Here, we provide an amplicon-based biodiversity study across all domains of life and all types of geothermal features, with physicochemical and biological data from 48 samples (39 Exposed and 9 Subglacial) collected through various field seasons. We found potentially high taxonomic novelty among prokaryotes and fungi, supporting past hypotheses of high endemism due to the distinctive and isolated environment; in particular, the large number of taxonomically divergent fungal sequences was surprising. We found that different site types had unique physicochemistry and biota; Exposed sites were warmer than Subglacial (median: 40 vs 10°C for Exposed and Subglacial, respectively) and tended to have more photosynthetic organisms (Cyanobacteria and Chlorophyta). Subglacial sites had more Actinobacteriota, correlated with greater concentrations of Ca and Mg present. Our results also suggest potential human impacts on these remote, highly significant sites, finding evidence for fungal taxa normally associated with wood decay. In this study, we provide a blueprint for future work aimed at better understanding the novel biota of Mt. Erebus.

14.
Sci Total Environ ; 952: 175675, 2024 Nov 20.
Artículo en Inglés | MEDLINE | ID: mdl-39233081

RESUMEN

In degraded urban habitats, nature-based solutions aim to enhance ecosystem functioning and service provision. Bivalves are increasingly reintroduced to urban environments to enhance water quality through biofiltration, yet their long-term sustainability remains uncertain. Following the restoration of the disused South Docks in Liverpool in the 1980s, natural colonization of mussels rapidly improved dock-basin water quality and supported diverse taxa, including other filter feeders. While the initial colonization phase has been well documented, there has been limited published research since the mid-1990s, despite ongoing routine water quality monitoring. Here, we assessed the long-term persistence of mussel populations, their associated biodiversity, and physico-chemical parameters of the water in Queens and Albert Docks by comparing historical (1980s to 1990s) and contemporary data from follow-up surveys (2012,2022). Following an initial period of poor water quality (high contamination and turbidity, low oxygen), the natural colonization of mussels from Albert Dock in 1988 extended throughout the South Docks. By the mid-1990s, the environment of the South Docks and its mussel populations had stabilized. The dock walls were dominated by mussels which provided important complex secondary substrate for invertebrates and macroalgae. Surveys conducted in 2012 and 2022 confirmed the continued dominance of mussels and estimates of mussel biofiltration rates confirm that mussels are continuing to contribute to maintaining water quality. A decline in salinity was observed in both docks in 2022, with evidence of recovery. While these ecosystems appear relatively stable, careful management of the hydrological regime is crucial to ensuring the persistence of mussels and resilient ecosystem service provision through biofiltration.


Asunto(s)
Bivalvos , Ecosistema , Monitoreo del Ambiente , Animales , Biodiversidad , Calidad del Agua , Ciudades
15.
Proc Natl Acad Sci U S A ; 121(37): e2318296121, 2024 Sep 10.
Artículo en Inglés | MEDLINE | ID: mdl-39236239

RESUMEN

Anthropogenic habitat destruction and climate change are reshaping the geographic distribution of plants worldwide. However, we are still unable to map species shifts at high spatial, temporal, and taxonomic resolution. Here, we develop a deep learning model trained using remote sensing images from California paired with half a million citizen science observations that can map the distribution of over 2,000 plant species. Our model-Deepbiosphere-not only outperforms many common species distribution modeling approaches (AUC 0.95 vs. 0.88) but can map species at up to a few meters resolution and finely delineate plant communities with high accuracy, including the pristine and clear-cut forests of Redwood National Park. These fine-scale predictions can further be used to map the intensity of habitat fragmentation and sharp ecosystem transitions across human-altered landscapes. In addition, from frequent collections of remote sensing data, Deepbiosphere can detect the rapid effects of severe wildfire on plant community composition across a 2-y time period. These findings demonstrate that integrating public earth observations and citizen science with deep learning can pave the way toward automated systems for monitoring biodiversity change in real-time worldwide.


Asunto(s)
Ciencia Ciudadana , Aprendizaje Profundo , Ecosistema , Plantas , Tecnología de Sensores Remotos , Tecnología de Sensores Remotos/métodos , Ciencia Ciudadana/métodos , Plantas/clasificación , Cambio Climático , Bosques , Biodiversidad , California , Incendios Forestales , Humanos , Conservación de los Recursos Naturales/métodos
16.
Plants (Basel) ; 13(17)2024 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-39273945

RESUMEN

This study focuses on the endangered neo-endemic Baltic dunes species Linaria loeselii Schweigg. (Plantaginaceae), also known as Linaria odora (M. Bieb.). By utilizing in vitro cultures, we successfully germinated seeds collected in situ. Our method, which involved using media supplemented with 5 µmol/L 6-benzylaminopurine, led to the indirect regeneration of shoots after 60 days of culture in the dark, significantly increasing the number of progeny plants. Additionally, the medium supplemented with 2.85 µmol/L indole-3-acetic acid and 10.2 µmol/L paclobutrazol allowed rooting after 30 days of shoot fragments. This research provides a potential basis for developing Linaria loeselii introduction programs into the environment, thereby contributing to the conservation of this endangered species.

17.
Mol Ecol Resour ; : e14018, 2024 Sep 16.
Artículo en Inglés | MEDLINE | ID: mdl-39285627

RESUMEN

For two decades, DNA barcoding and, more recently, DNA metabarcoding have been used for molecular species identification and estimating biodiversity. Despite their growing use, few studies have systematically evaluated these methods. This study aims to evaluate the efficacy of barcoding methods in identifying species and estimating biodiversity, by assessing their consistency with traditional morphological identification and evaluating how assignment consistency is influenced by taxonomic group, sequence similarity thresholds and geographic distance. We first analysed 951 insect specimens across three taxonomic groups: butterflies, bumblebees and parasitic wasps, using both morphological taxonomy and single-specimen COI DNA barcoding. An additional 25,047 butterfly specimens were identified by COI DNA metabarcoding. Finally, we performed a systematic review of 99 studies to assess average consistency between insect species identity assigned via morphology and COI barcoding and to examine the distribution of research effort. Species assignment consistency was influenced by taxonomic group, sequence similarity thresholds and geographic distance. An average assignment consistency of 49% was found across taxonomic groups, with parasitic wasps displaying lower consistency due to taxonomic impediment. The number of missing matches doubled with a 100% sequence similarity threshold and COI intraspecific variation increased with geographic distance. Metabarcoding results aligned well with morphological biodiversity estimates and a strong positive correlation between sequence reads and species abundance was found. The systematic review revealed an 89% average consistency and also indicated taxonomic and geographic biases in research effort. Together, our findings demonstrate that while problems persist, barcoding approaches offer robust alternatives to traditional taxonomy for biodiversity assessment.

18.
Environ Int ; 191: 108999, 2024 Sep 10.
Artículo en Inglés | MEDLINE | ID: mdl-39276592

RESUMEN

While pesticide use is subject to strict regulatory oversight worldwide, it remains a main concern for environmental protection, including biodiversity conservation. This is partly due to the current regulatory approach that relies on separate assessments for each single pesticide, crop use, and non-target organism group at local scales. Such assessments tend to overlook the combined effects of overall pesticide usage at larger spatial scales. Integrative landscape-based approaches are emerging, enabling the consideration of agricultural management, the environmental characteristics, and the combined effects of pesticides applied in a same or in different crops within an area. These developments offer the opportunity to deliver informative risk predictions relevant for different decision contexts including their connection to larger spatial scales and to combine environmental risks of pesticides, with those from other environmental stressors. We discuss the needs, challenges, opportunities and available tools for implementing landscape-based approaches for prospective and retrospective pesticide Environmental Risk Assessments (ERA). A set of "building blocks" that emerged from the discussions have been integrated into a conceptual framework. The framework includes elements to facilitate its implementation, in particular: flexibility to address the needs of relevant users and stakeholders; means to address the inherent complexity of environmental systems; connections to make use of and integrate data derived from monitoring programs; and options for validation and approaches to facilitate future use in a regulatory context. The conceptual model can be applied to existing ERA methodologies, facilitating its comparability, and highlighting interoperability drivers at landscape level. The benefits of landscape-based pesticide ERA extend beyond regulation. Linking and validating risk predictions with relevant environmental impacts under a solid science-based approach will support the setting of protection goals and the formulation of sustainable agricultural strategies. Moreover, landscape ERA offers a communication tool on realistic pesticide impacts in a multistressors environment for stakeholders and citizens.

19.
Mar Environ Res ; 202: 106745, 2024 Sep 13.
Artículo en Inglés | MEDLINE | ID: mdl-39276753

RESUMEN

Emerita species (Scopoli, 1777; Crustacea: Decapoda: Pleocyemata: Anomura: Hippidae), commonly known as mole crabs, are specialized in burying and distributed in the swash zone of the Pacific, Atlantic, and Indian Ocean sandy beaches. This genus has received increasing attention in scientific studies owing to its ecological importance. It is used as a model species to evaluate the ecological state of communities and as a bioindicator of environmental health and quality. Here, we systematically reviewed the literature to understand how Emerita species are affected by anthropogenic activities and gathered records of its population densities. Two independent literature searches were conducted on anthropogenic impact and population density. Anthropogenic impacts were reviewed using 61 articles published between 1974 and 2023. The main anthropogenic impacts were physical changes (n = 19) and toxicity (n = 18). E. analoga, E. talpoida, and E. brasiliensis were the most studied species. Some anthropogenic impacts did not directly damage E. analoga and E. talpoida. E. analoga was more tolerant of certain types of impacts related to physical changes and toxicity. Lower densities of E. brasiliensis were associated with more urbanized beaches. Accessing data on annual cycles, density fluctuations, and population peaks is important to minimize the impacts on populations. In total, 42 articles reported surveys on population density or abundance in nine countries. E. brasiliensis exhibited the highest amount (n = 17) on the beaches in Brazil and Uruguay, followed by E. analoga (n = 13), in Chile and USA. A temporal reduction in the densities was observed for E. brasiliensis, primarily on beaches in Brazil, and E. talpoida. A global standardization of sampling and density and abundance data presentation is necessary for effective long-term assessments of Emerita species. This study synthesizes the impacts that have occurred on Emerita, highlighting potential threats to its conservation.

20.
J Environ Manage ; 370: 122473, 2024 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-39278017

RESUMEN

Improving the connectivity of ecological networks (ENs) is a proven strategy for biological conservation. However, without a clear understanding of animal movement, research on ENs may not provide a sufficient reference for maintaining biodiversity. To address this gap, we embraced central concepts of movement ecology and conducted a study in the Qilian Mountains. The predictability and seasonality of environmental conditions were combined to identify ecological sources with rich temporal niches and improve the informed preference character of resistance surface. Then, we constructed ENs with six dispersal thresholds. Further, integrating modularity and circuit theory, we pinpointed priority areas for restoration within the ENs. Our findings indicated that the eastern part of the Qilian Mountains showed higher biodiversity suitability, with terrain being the primary factor limiting dispersal. Additionally, comparative analyses demonstrate that the new method for measuring biodiversity from the perspective of temporal niche is reliable and better aligns with the needs of biodiversity conservation. In light of emerging challenges within the study area, where apex predators seriously suppress the populations of some smaller predators, we propose a novel conservation idea that emphasizes the strategic retention and removal of barriers to maintain biological balance. This study enriches methodologies for biodiversity measurement, provides forward-looking conservation strategies, and offers practical contributions toward mitigating biodiversity loss.

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